Click here to switch to the map view.

The map label for this gene is 220917321

Identifier: 220917321

GI number: 220917321

Start: 2462380

End: 2463243

Strand: Direct

Name: 220917321

Synonym: A2cp1_2221

Alternate gene names: NA

Gene position: 2462380-2463243 (Clockwise)

Preceding gene: 220917319

Following gene: 220917323

Centisome position: 48.96

GC content: 74.19

Gene sequence:

>864_bases
ATGCCGCGCGACCCCGACCGCATCGACTGGCTGCCCTCGCTCCCGTTCTTCGCCGCGCACCTCGTGGCGCTGGCCACCCC
GTGGCTGGCGCCGCTCGAGTGGCGCTGGGGCGCGCTCGCGGCCGGGCTGTACGCGCTGCGCATGTTCGCGGTGACGGCCG
GGTATCACCGGTACTTCTCGCACCGCAGCTACCGGACCTCGCGCGCGTTCCAGCTCCTGCTCGCGGTGCTCGGCGCGAGC
GCGGCGCAGAAGGGCCCGCTCTGGTGGGCCGCCCACCACCGCGACCACCACCGCCACTCCGACGGGCCGGAGGACGTCCA
CTCGCCGCTGGAGCGGGGGTTCTGGTGGAGCCACGTGGGCTGGATCCTCTCCCGCCGCCACCACGAGACGAAGCTCGACC
GCGTGCGCGACCTCGCGCGCTTCCCGGAGCTGCGGTGGATCGACCGCCACCACCTGGTGCCGCCGGCGGCGCTCGCCATC
GGGCTGTTCCTGGCGGGCGGGCTGCCGGCGCTGCTGTGGGGGTTCTTCGTCTCCACCGTCGCGCTCTGGCACGGCACGTT
CGTCATCAACTCGCTCGCGCACGTGTTCGGCCGCCGCCGCTACGCCACCGACGACGGCTCGCGCAACAGCCTGGTCCTCG
CGCTCGTGACGCTGGGCGAGGGGTGGCACAACAACCACCACTTCTACGCGGCCAGCGCGCGGCAGGGCTTCTTCTGGTGG
GAGATCGATCTGTCCTGGTACGCGCTGCGCGCGCTCGCGGCGGTGCGCCTGGTCCAGGACCTGAAGGTCCCGCCGCCGCA
GGTCCGCCTGGCGCACCTCCGCACGGCCATCCCGCCCGCCGCGGCGCGCGCCGAGGCGCTCTGA

Upstream 100 bases:

>100_bases
CTCTGGGGCCGCGCGTCGCGGGGGGCATCCCCCGCCGCCGGGCGAGCGCACGAACCGCGGTGACGCACCCGTGACAGCGG
CCCGCCAAGCTCCGGGGCTC

Downstream 100 bases:

>100_bases
CTCTGCCCGCCGCACCGCGCTAGAGGAACACCGAGCCGCGCGCGGACACGTCCTCGTCCAGCATGCCCTGCAGCGTCGCG
CGGACCGTCTCCGCCAGCTC

Product: Stearoyl-CoA 9-desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Subfamily; Acyl-CoA Desaturase; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Domain Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Fatty Acid Desaturase Family Proteiin; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Membrane-Bound Fatty Acid Desaturase; Delta-9 Fatty Acid Desaturase; Delta-9 Fatty Ac Id Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Protein

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MPRDPDRIDWLPSLPFFAAHLVALATPWLAPLEWRWGALAAGLYALRMFAVTAGYHRYFSHRSYRTSRAFQLLLAVLGAS
AAQKGPLWWAAHHRDHHRHSDGPEDVHSPLERGFWWSHVGWILSRRHHETKLDRVRDLARFPELRWIDRHHLVPPAALAI
GLFLAGGLPALLWGFFVSTVALWHGTFVINSLAHVFGRRRYATDDGSRNSLVLALVTLGEGWHNNHHFYAASARQGFFWW
EIDLSWYALRALAAVRLVQDLKVPPPQVRLAHLRTAIPPAAARAEAL

Sequences:

>Translated_287_residues
MPRDPDRIDWLPSLPFFAAHLVALATPWLAPLEWRWGALAAGLYALRMFAVTAGYHRYFSHRSYRTSRAFQLLLAVLGAS
AAQKGPLWWAAHHRDHHRHSDGPEDVHSPLERGFWWSHVGWILSRRHHETKLDRVRDLARFPELRWIDRHHLVPPAALAI
GLFLAGGLPALLWGFFVSTVALWHGTFVINSLAHVFGRRRYATDDGSRNSLVLALVTLGEGWHNNHHFYAASARQGFFWW
EIDLSWYALRALAAVRLVQDLKVPPPQVRLAHLRTAIPPAAARAEAL
>Mature_286_residues
PRDPDRIDWLPSLPFFAAHLVALATPWLAPLEWRWGALAAGLYALRMFAVTAGYHRYFSHRSYRTSRAFQLLLAVLGASA
AQKGPLWWAAHHRDHHRHSDGPEDVHSPLERGFWWSHVGWILSRRHHETKLDRVRDLARFPELRWIDRHHLVPPAALAIG
LFLAGGLPALLWGFFVSTVALWHGTFVINSLAHVFGRRRYATDDGSRNSLVLALVTLGEGWHNNHHFYAASARQGFFWWE
IDLSWYALRALAAVRLVQDLKVPPPQVRLAHLRTAIPPAAARAEAL

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI53759151, Length=274, Percent_Identity=31.3868613138686, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI148596961, Length=234, Percent_Identity=31.6239316239316, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI148596938, Length=140, Percent_Identity=37.8571428571429, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17561776, Length=246, Percent_Identity=30.4878048780488, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17540878, Length=252, Percent_Identity=29.3650793650794, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17561774, Length=285, Percent_Identity=29.1228070175439, Blast_Score=99, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6321383, Length=228, Percent_Identity=32.0175438596491, Blast_Score=122, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24646295, Length=251, Percent_Identity=35.4581673306773, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24646303, Length=241, Percent_Identity=31.9502074688797, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24646299, Length=241, Percent_Identity=31.9502074688797, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24646305, Length=241, Percent_Identity=31.9502074688797, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24646301, Length=241, Percent_Identity=31.9502074688797, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24646297, Length=241, Percent_Identity=31.9502074688797, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI21358571, Length=234, Percent_Identity=29.0598290598291, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646500, Length=195, Percent_Identity=27.6923076923077, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21358573, Length=202, Percent_Identity=30.6930693069307, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24662393, Length=238, Percent_Identity=26.0504201680672, Blast_Score=85, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32717; Mature: 32586

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRDPDRIDWLPSLPFFAAHLVALATPWLAPLEWRWGALAAGLYALRMFAVTAGYHRYFS
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRSYRTSRAFQLLLAVLGASAAQKGPLWWAAHHRDHHRHSDGPEDVHSPLERGFWWSHVG
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHH
WILSRRHHETKLDRVRDLARFPELRWIDRHHLVPPAALAIGLFLAGGLPALLWGFFVSTV
HHHHHHHHHHHHHHHHHHHHCCCCEECHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
ALWHGTFVINSLAHVFGRRRYATDDGSRNSLVLALVTLGEGWHNNHHFYAASARQGFFWW
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEE
EIDLSWYALRALAAVRLVQDLKVPPPQVRLAHLRTAIPPAAARAEAL
EECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
PRDPDRIDWLPSLPFFAAHLVALATPWLAPLEWRWGALAAGLYALRMFAVTAGYHRYFS
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRSYRTSRAFQLLLAVLGASAAQKGPLWWAAHHRDHHRHSDGPEDVHSPLERGFWWSHVG
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHH
WILSRRHHETKLDRVRDLARFPELRWIDRHHLVPPAALAIGLFLAGGLPALLWGFFVSTV
HHHHHHHHHHHHHHHHHHHHCCCCEECHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
ALWHGTFVINSLAHVFGRRRYATDDGSRNSLVLALVTLGEGWHNNHHFYAASARQGFFWW
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEE
EIDLSWYALRALAAVRLVQDLKVPPPQVRLAHLRTAIPPAAARAEAL
EECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA