| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917303
Identifier: 220917303
GI number: 220917303
Start: 2444393
End: 2445322
Strand: Direct
Name: 220917303
Synonym: A2cp1_2203
Alternate gene names: NA
Gene position: 2444393-2445322 (Clockwise)
Preceding gene: 220917296
Following gene: 220917304
Centisome position: 48.6
GC content: 81.61
Gene sequence:
>930_bases GTGCTCTCGCGGATCCTCGCGTTCCGTCCGCCCGGCGTGCTCGGACGCCTGCCGCCGCGCAGCGGCGCCTGCCCCCTCTC GCTGCGCGAGCTGATGGGCCCGGCGGTGGAGCTCGGGACGGCGCTCCCGCTCGTGGCCGCGCCCTCCGCCGCGGTGGCCC GGGCCGCGCTGGTGGCCGCGAAGGAGCTGGGCAGCGCGCTCGGCCTGGCGCTGCCGGCCGGCACGGCGCCGGAGCCCTGG TTCGCCACGGTGACCGCCGCGGCCGACGAGGTCGCGGCGGGGCTGCCCATCTTCCTCTCCGCCGAGGTGCGGGTGGAGGG CGAGGCGGCGATGCAGGTGGACCGCGCCTGCGAGGAGGCGTGGCGCCTGGTGGACGCGGGGCTCACGCACCTCGCGATCG ACGCGGCGGAGGTGGCCGCGGAGGAGCGCGCGCGCGTGCTCGCCGAGGTGGCGGCGGGGGCGCTGGAGCGCGGGGTGTGC GTCGACTGCGTGGTGCCGATCGACCCGGGCGCCCCGGCGGCGCGGCACGCCGCGGTGCTGTTCGAGGCGCTCGCGGCGTG CGGCGCCCCGCCCGACGTGGCGAGCGTGCGCTGCCCGGCGCCCTCGGGCCCGGAGGACGCGCGCGCCCAGGTGGGCGCGC TGGCGCGGCTCTCGGCGGCGCTCGCCGGCGTGCCCGTCGTGCGCCGTGGGCCGGTGTCCCGCCCGCTGCTCGGGCTGCTC GCGGGCTCGCCGGTGAAGGCGTGCGAGGACGGGGGCGCGGCCGCTGCGCGCGCGCGGGCGCCGCTCGGCGGCGGCGCCGA CGAGGCGGACCGGCGCGAGGCCCGGGTCTACGTCGAGGTGATGGACTTCCTGGAGCGGCTCGGCGCGGCGGGCAGCGCGC GCGGGCTGGCGCGGGCGCTGGAGGCGCGGCTCACCGAGGGCGGCGCGTGA
Upstream 100 bases:
>100_bases CATAGCGGAAAGCGCATCCTAGTTAACGGACGAACATCCCGTCAAGCGGACGCGCCGTCCGCGGCCCGCCGGCCGGGCGC TCGCGTGCTATGAACCGGGC
Downstream 100 bases:
>100_bases CGCGCATCATCGCCGGGACCGCGCGCGGCCGGCGGCTGGCCGTGCCGAAGGGGCAGGGGACGCGGCCCACCAGCGACAAG GTCCGCGGCGCGGTGTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MLSRILAFRPPGVLGRLPPRSGACPLSLRELMGPAVELGTALPLVAAPSAAVARAALVAAKELGSALGLALPAGTAPEPW FATVTAAADEVAAGLPIFLSAEVRVEGEAAMQVDRACEEAWRLVDAGLTHLAIDAAEVAAEERARVLAEVAAGALERGVC VDCVVPIDPGAPAARHAAVLFEALAACGAPPDVASVRCPAPSGPEDARAQVGALARLSAALAGVPVVRRGPVSRPLLGLL AGSPVKACEDGGAAAARARAPLGGGADEADRREARVYVEVMDFLERLGAAGSARGLARALEARLTEGGA
Sequences:
>Translated_309_residues MLSRILAFRPPGVLGRLPPRSGACPLSLRELMGPAVELGTALPLVAAPSAAVARAALVAAKELGSALGLALPAGTAPEPW FATVTAAADEVAAGLPIFLSAEVRVEGEAAMQVDRACEEAWRLVDAGLTHLAIDAAEVAAEERARVLAEVAAGALERGVC VDCVVPIDPGAPAARHAAVLFEALAACGAPPDVASVRCPAPSGPEDARAQVGALARLSAALAGVPVVRRGPVSRPLLGLL AGSPVKACEDGGAAAARARAPLGGGADEADRREARVYVEVMDFLERLGAAGSARGLARALEARLTEGGA >Mature_309_residues MLSRILAFRPPGVLGRLPPRSGACPLSLRELMGPAVELGTALPLVAAPSAAVARAALVAAKELGSALGLALPAGTAPEPW FATVTAAADEVAAGLPIFLSAEVRVEGEAAMQVDRACEEAWRLVDAGLTHLAIDAAEVAAEERARVLAEVAAGALERGVC VDCVVPIDPGAPAARHAAVLFEALAACGAPPDVASVRCPAPSGPEDARAQVGALARLSAALAGVPVVRRGPVSRPLLGLL AGSPVKACEDGGAAAARARAPLGGGADEADRREARVYVEVMDFLERLGAAGSARGLARALEARLTEGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30969; Mature: 30969
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRILAFRPPGVLGRLPPRSGACPLSLRELMGPAVELGTALPLVAAPSAAVARAALVAA CCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHCCCCHHCCCHHHHHHHHHHHH KELGSALGLALPAGTAPEPWFATVTAAADEVAAGLPIFLSAEVRVEGEAAMQVDRACEEA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHH WRLVDAGLTHLAIDAAEVAAEERARVLAEVAAGALERGVCVDCVVPIDPGAPAARHAAVL HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHH FEALAACGAPPDVASVRCPAPSGPEDARAQVGALARLSAALAGVPVVRRGPVSRPLLGLL HHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH AGSPVKACEDGGAAAARARAPLGGGADEADRREARVYVEVMDFLERLGAAGSARGLARAL CCCCHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EARLTEGGA HHHHHCCCC >Mature Secondary Structure MLSRILAFRPPGVLGRLPPRSGACPLSLRELMGPAVELGTALPLVAAPSAAVARAALVAA CCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHCCCCHHCCCHHHHHHHHHHHH KELGSALGLALPAGTAPEPWFATVTAAADEVAAGLPIFLSAEVRVEGEAAMQVDRACEEA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHH WRLVDAGLTHLAIDAAEVAAEERARVLAEVAAGALERGVCVDCVVPIDPGAPAARHAAVL HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHH FEALAACGAPPDVASVRCPAPSGPEDARAQVGALARLSAALAGVPVVRRGPVSRPLLGLL HHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH AGSPVKACEDGGAAAARARAPLGGGADEADRREARVYVEVMDFLERLGAAGSARGLARAL CCCCHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EARLTEGGA HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA