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The map label for this gene is omp32 [H]

Identifier: 220917280

GI number: 220917280

Start: 2422063

End: 2423097

Strand: Direct

Name: omp32 [H]

Synonym: A2cp1_2179

Alternate gene names: 220917280

Gene position: 2422063-2423097 (Clockwise)

Preceding gene: 220917279

Following gene: 220917283

Centisome position: 48.16

GC content: 71.11

Gene sequence:

>1035_bases
ATGAGACCGCTCGTCTCGGCAGCGCTCTTCGCCTGCCTCGTCGCCGCCCGCCCCGCCGCCGCGGAGCCGCCCGCCATCAC
GATCTACGGCAAGATGGACGTCGGCTACGCCCACGTGCAGGGCGCGAACGGTGCCGTCCCGCACCAGACCCCCACCGACC
TCGTCGAGTCCGGCCAGCTCTCCGGCAGCCGGCTCGGCTTCAAGGCCACCGAGGACCTCGGCAACGGCATCAGCGCCCTG
TTCCTGGTGGAGACCGGCGTCAGCCTCGACACCGGCAGCTCGACCAGCGCGCAGTTCTGGGGCCGGCAGGCCTACGCCGG
CCTGACCGGCGCCTGGGGGAAGGTCACCGTGGGCCGCCATCAGACCCCCGGCTACTACGTGCAGTGCGACGTCGATCCGT
TCGAGATCGGCACCGTCGGCAACATCGAGAACCTGCTCAAGCGGCAGTCGCGCACCGACAACTCGGTCCAGTACGTCACG
CCCACGTTCGCGGGCCTCGAGCTGACCGCGCTCTGGGCCCAGAACCGCGCCGGCCCGGAGACGGAGGGGAACGGCGACGA
CACGCCCGGCTTCTCCGGCGGCCTGCGCTGGAAGTACGGCCCGGTGTTCGCCGCGGTCGCCTACTACCAGGACAAGAGCA
AGGTGACCGACGTCATCACCCGCATCGGCAACGCCGGCGCGACCTGGGATCTCGGCGTCGTGAAGCTGCACGCCTCGGGC
GGCTTCTACCGCCTGAGCGACGACACCGCCCAGCAGACCAGCGCGCTCGCCGGCGTCACCGTGCCGGTGCCTGGGATCGG
CGGCACCGTCCGCGCGTCCTACTCGCAGATGTGGGAGGACGCCGCGGACGCCGCCGGCGCCTCCAAGGTCGCGCTCGGCT
ACCTCCGCCCGCTGGCGAAGAAGACCGACGTGTACCTGGTCTTCGCGCACATCGAGAACGAGCGGAACGGCACGAAGACG
TTCGACATCACCGACGCCATCGCGAAGGCGGGCGGGGTGGACGGCGTCTCGGCCGGCCTGCGCTACGCGTTCTAG

Upstream 100 bases:

>100_bases
GGCCTGATCTCGACGGTGGTCGCGATCGCCACCGGGCTCGTCATCGTCCGCTTCGTGTTCTGACCCGCAGCCCGCACCGC
CACCTGAGAGAGAGGAAGCC

Downstream 100 bases:

>100_bases
CCGCGCGAACGGTCGTCCCCGGTCCGCGAGCACCGCCTGTTCCGCCGAGAGGTGGGGCCTCGCAGCGGGGGAGGGCGCCT
GGATGGTCCAGGCGCCCTCT

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MRPLVSAALFACLVAARPAAAEPPAITIYGKMDVGYAHVQGANGAVPHQTPTDLVESGQLSGSRLGFKATEDLGNGISAL
FLVETGVSLDTGSSTSAQFWGRQAYAGLTGAWGKVTVGRHQTPGYYVQCDVDPFEIGTVGNIENLLKRQSRTDNSVQYVT
PTFAGLELTALWAQNRAGPETEGNGDDTPGFSGGLRWKYGPVFAAVAYYQDKSKVTDVITRIGNAGATWDLGVVKLHASG
GFYRLSDDTAQQTSALAGVTVPVPGIGGTVRASYSQMWEDAADAAGASKVALGYLRPLAKKTDVYLVFAHIENERNGTKT
FDITDAIAKAGGVDGVSAGLRYAF

Sequences:

>Translated_344_residues
MRPLVSAALFACLVAARPAAAEPPAITIYGKMDVGYAHVQGANGAVPHQTPTDLVESGQLSGSRLGFKATEDLGNGISAL
FLVETGVSLDTGSSTSAQFWGRQAYAGLTGAWGKVTVGRHQTPGYYVQCDVDPFEIGTVGNIENLLKRQSRTDNSVQYVT
PTFAGLELTALWAQNRAGPETEGNGDDTPGFSGGLRWKYGPVFAAVAYYQDKSKVTDVITRIGNAGATWDLGVVKLHASG
GFYRLSDDTAQQTSALAGVTVPVPGIGGTVRASYSQMWEDAADAAGASKVALGYLRPLAKKTDVYLVFAHIENERNGTKT
FDITDAIAKAGGVDGVSAGLRYAF
>Mature_344_residues
MRPLVSAALFACLVAARPAAAEPPAITIYGKMDVGYAHVQGANGAVPHQTPTDLVESGQLSGSRLGFKATEDLGNGISAL
FLVETGVSLDTGSSTSAQFWGRQAYAGLTGAWGKVTVGRHQTPGYYVQCDVDPFEIGTVGNIENLLKRQSRTDNSVQYVT
PTFAGLELTALWAQNRAGPETEGNGDDTPGFSGGLRWKYGPVFAAVAYYQDKSKVTDVITRIGNAGATWDLGVVKLHASG
GFYRLSDDTAQQTSALAGVTVPVPGIGGTVRASYSQMWEDAADAAGASKVALGYLRPLAKKTDVYLVFAHIENERNGTKT
FDITDAIAKAGGVDGVSAGLRYAF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 36109; Mature: 36109

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLVSAALFACLVAARPAAAEPPAITIYGKMDVGYAHVQGANGAVPHQTPTDLVESGQL
CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHCCCC
SGSRLGFKATEDLGNGISALFLVETGVSLDTGSSTSAQFWGRQAYAGLTGAWGKVTVGRH
CCCCCCCEEHHHHCCCCEEEEEEECCCEECCCCCCCHHHCCCHHHCCCCCCCCEEEECCC
QTPGYYVQCDVDPFEIGTVGNIENLLKRQSRTDNSVQYVTPTFAGLELTALWAQNRAGPE
CCCCEEEEECCCCEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCC
TEGNGDDTPGFSGGLRWKYGPVFAAVAYYQDKSKVTDVITRIGNAGATWDLGVVKLHASG
CCCCCCCCCCCCCCCCEECCHHEEEHHHHCCHHHHHHHHHHHCCCCCEEEEEEEEEECCC
GFYRLSDDTAQQTSALAGVTVPVPGIGGTVRASYSQMWEDAADAAGASKVALGYLRPLAK
CEEEECCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
KTDVYLVFAHIENERNGTKTFDITDAIAKAGGVDGVSAGLRYAF
CCCEEEEEEEEECCCCCCEEEEHHHHHHHHCCCCCHHCCCEECC
>Mature Secondary Structure
MRPLVSAALFACLVAARPAAAEPPAITIYGKMDVGYAHVQGANGAVPHQTPTDLVESGQL
CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHCCCC
SGSRLGFKATEDLGNGISALFLVETGVSLDTGSSTSAQFWGRQAYAGLTGAWGKVTVGRH
CCCCCCCEEHHHHCCCCEEEEEEECCCEECCCCCCCHHHCCCHHHCCCCCCCCEEEECCC
QTPGYYVQCDVDPFEIGTVGNIENLLKRQSRTDNSVQYVTPTFAGLELTALWAQNRAGPE
CCCCEEEEECCCCEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCC
TEGNGDDTPGFSGGLRWKYGPVFAAVAYYQDKSKVTDVITRIGNAGATWDLGVVKLHASG
CCCCCCCCCCCCCCCCEECCHHEEEHHHHCCHHHHHHHHHHHCCCCCEEEEEEEEEECCC
GFYRLSDDTAQQTSALAGVTVPVPGIGGTVRASYSQMWEDAADAAGASKVALGYLRPLAK
CEEEECCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
KTDVYLVFAHIENERNGTKTFDITDAIAKAGGVDGVSAGLRYAF
CCCEEEEEEEEECCCCCCEEEEHHHHHHHHCCCCCHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]