| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is tag [H]
Identifier: 220916899
GI number: 220916899
Start: 2004839
End: 2005570
Strand: Reverse
Name: tag [H]
Synonym: A2cp1_1795
Alternate gene names: 220916899
Gene position: 2005570-2004839 (Counterclockwise)
Preceding gene: 220916904
Following gene: 220916896
Centisome position: 39.88
GC content: 75.27
Gene sequence:
>732_bases ATGCCCCAGCACGCCCACGCGCTCGACGACGGCCTCGGCACGGGCCCCGACGGCCGGGCCCGCTGCGCCTGGGGGCTCTC GGCCGCGGACTACGTCCGGTACCACGACGAGGAGTGGGGGCTCCCCGTCGCGGACGATCGCCGGCTGTTCGAGAAGCTGT GCCTGGAAGGCTTCCAGTCCGGCCTGTCGTGGCTCACCATCCTGCGCAAGCGCGAGGCGTTCCGGACCGCGTTCGCCGGC TTCGACTTCGAGAAGGTGGCCCGCTTCGGCGCCCGCGACGTGGCGCGCCTGCTCGGGGACGCCGGCATCGTGCGCCACCG CGGCAAGATCGAGGCGACGCTCAACAACGCGCGGCGCGCCTGCGAGCTCGCCGCCGAGGCCGGATCTCTCGCGGCCTACT TCTGGCAATTCGAGCCGCCGAAGGCCTCGCGGCCGGAGCGGGTCACCTGGGCGGCGCTCCGGGCGCAGCCGGTCACCACG GAATCGAAAGCGCTCTCGCGCGACCTGAAGCGGCGCGGCTGGGCGTTCGTCGGGCCGACCACCTGCTACGCGTTCATGCA GGCCATGGGGCTCGTGAACGACCACGTGGAGGGCTGCGCCGTGCGCGGCCGCGTCGAGCGGGCGCGGCGCGGGTTCGAGC GGCCGGTCGTCGTCGACGGGGCGTCAGCGGAGCCCGAGCCGGCGCCAGCGTCCCGCGCACGAGCCCGGGCCGTCGCGCGG GGGCGCCGCTAG
Upstream 100 bases:
>100_bases CGAGCCACCATCGGGTGCCTGCCCGGCGCCTTGACGCCGCCCCCGCCGGCCGGCAGGTTCCGCGCACACGGCGCCGGCGC ACCGGCGCGGGAGGAACCCG
Downstream 100 bases:
>100_bases CCCGGGTCGCCGCCCGGGCGCTGCCGCTATCGAGGATCCTGGGGGGGCGCGGGCGGACGCACGAGCCGCTGGAAGAGCCG CTCGAGCGCGCGGTCCGGGT
Product: DNA-3-methyladenine glycosylase I
Products: NA
Alternate protein names: 3-methyladenine-DNA glycosylase I, constitutive; TAG I; DNA-3-methyladenine glycosidase I; DNA-3-methyladenine glycosylase I [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MPQHAHALDDGLGTGPDGRARCAWGLSAADYVRYHDEEWGLPVADDRRLFEKLCLEGFQSGLSWLTILRKREAFRTAFAG FDFEKVARFGARDVARLLGDAGIVRHRGKIEATLNNARRACELAAEAGSLAAYFWQFEPPKASRPERVTWAALRAQPVTT ESKALSRDLKRRGWAFVGPTTCYAFMQAMGLVNDHVEGCAVRGRVERARRGFERPVVVDGASAEPEPAPASRARARAVAR GRR
Sequences:
>Translated_243_residues MPQHAHALDDGLGTGPDGRARCAWGLSAADYVRYHDEEWGLPVADDRRLFEKLCLEGFQSGLSWLTILRKREAFRTAFAG FDFEKVARFGARDVARLLGDAGIVRHRGKIEATLNNARRACELAAEAGSLAAYFWQFEPPKASRPERVTWAALRAQPVTT ESKALSRDLKRRGWAFVGPTTCYAFMQAMGLVNDHVEGCAVRGRVERARRGFERPVVVDGASAEPEPAPASRARARAVAR GRR >Mature_242_residues PQHAHALDDGLGTGPDGRARCAWGLSAADYVRYHDEEWGLPVADDRRLFEKLCLEGFQSGLSWLTILRKREAFRTAFAGF DFEKVARFGARDVARLLGDAGIVRHRGKIEATLNNARRACELAAEAGSLAAYFWQFEPPKASRPERVTWAALRAQPVTTE SKALSRDLKRRGWAFVGPTTCYAFMQAMGLVNDHVEGCAVRGRVERARRGFERPVVVDGASAEPEPAPASRARARAVARG RR
Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions [H]
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789971, Length=181, Percent_Identity=48.0662983425414, Blast_Score=180, Evalue=7e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005019 - InterPro: IPR011257 - InterPro: IPR004597 [H]
Pfam domain/function: PF03352 Adenine_glyco [H]
EC number: =3.2.2.20 [H]
Molecular weight: Translated: 26908; Mature: 26777
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQHAHALDDGLGTGPDGRARCAWGLSAADYVRYHDEEWGLPVADDRRLFEKLCLEGFQS CCCHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH GLSWLTILRKREAFRTAFAGFDFEKVARFGARDVARLLGDAGIVRHRGKIEATLNNARRA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH CELAAEAGSLAAYFWQFEPPKASRPERVTWAALRAQPVTTESKALSRDLKRRGWAFVGPT HHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECHH TCYAFMQAMGLVNDHVEGCAVRGRVERARRGFERPVVVDGASAEPEPAPASRARARAVAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHC GRR CCC >Mature Secondary Structure PQHAHALDDGLGTGPDGRARCAWGLSAADYVRYHDEEWGLPVADDRRLFEKLCLEGFQS CCHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH GLSWLTILRKREAFRTAFAGFDFEKVARFGARDVARLLGDAGIVRHRGKIEATLNNARRA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH CELAAEAGSLAAYFWQFEPPKASRPERVTWAALRAQPVTTESKALSRDLKRRGWAFVGPT HHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECHH TCYAFMQAMGLVNDHVEGCAVRGRVERARRGFERPVVVDGASAEPEPAPASRARARAVAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHC GRR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3536912; 3520491; 8041620; 9278503 [H]