| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yheS [H]
Identifier: 220916896
GI number: 220916896
Start: 2001915
End: 2003561
Strand: Reverse
Name: yheS [H]
Synonym: A2cp1_1792
Alternate gene names: 220916896
Gene position: 2003561-2001915 (Counterclockwise)
Preceding gene: 220916899
Following gene: 220916894
Centisome position: 39.84
GC content: 72.07
Gene sequence:
>1647_bases GTGATCCGCCTCGACGCCATCTCCAAGCAGCACGGCAACCAGCTCCTGTTCGTGGAGGCCTCCGCCGTCGTCCACCGCGG CGAGAAGGTCGGCCTCGTCGGCCCGAACGGCGCGGGCAAGTCCACCCTGTTCCGCCTGATCACGCGCGAGGAGGCGCCGG ACGAGGGCCAGGTCTCCATCGACCGCGGAGTGACCGTGGGTCACTTCTCGCAGGACGTCGGCGAGATGTCCGGCCGGACC GCGCTCGCCGAGACCATGGACGGCGCCGGCCCCGTGTCGGAGGTGGCCGCCGAGCTGCACGGGCTCGAGCAGGCGCTCGC GGATCCGGAGCGCGCGGACGAGCTGGAGGCGCTGGTCGAGCGCTTCGGCCACGTGCAGGCGCGCTTCGACGAGCTGGGCG GGTACGCGCTCGAGGCCCGGGCGCGGGAGATCCTGGCCGGCCTCGGCTTCACGCAGGAGATGATGGACGGCGACGTCGGC GCGCTCTCCGGCGGGTGGAAGATGCGCGTGGCGCTGGCGCGCATCCTGCTCATGCGGCCCGACGCCATGCTCCTCGACGA GCCCTCCAACCACCTCGACCTCGAGTCGATCATCTGGCTGGAGGAGTTCCTGCGCGGCTACGAGGGCGCCATCCTCATGA CCTCGCACGACCGCGAGTTCATGAACCGCGTGGTCGGGAAGATCATCGAGATCGACGCCGGCACGCTCACCACCTACTCC GGCGACTACGACCTGTACGAGCGGGAGCGGGCCGTCGCCGACCAGCACCAGCAGGCCGCGTTCGACCGGCAGCAGGCGAT GCTGAAGAAGGAGCTCGCGTTCATCGAGCGGTTCAAGGCGCGCGCCTCCCACGCGGCGCAGGTGCAGTCGCGGGTGAAGA AGCTCGACAAGATCGAGAAGGTCGAGCCGCCCAAGGTGAGGCGCACCGTCGACTTCGAGTTCCGGCCGCCGCCGCGGTCC GGCGAGGACGTGGCGAAGCTGGCGGGCGTGGTGAAGCGGTACGGCGAGCGCACCGTGTATGGCGGCCTCGACTTCCTCGT CCGCCGCGGCGAGCGCTGGTGCGTGCTGGGCGCGAACGGCGCCGGCAAGTCCACGCTGCTGCGGATGGTGGCCGGGGAGT CCACGCCCGACGCCGGGTCGGTGACCGTCGGCGGCAGCGTGAAGATGGGGTACTTCGCGCAGCACGCCATGGAGCTGCTG CGCGCCGAGGAGACGGTGTGGGACGCGCTGCAGCGCGCGTTCCCGCGCGCGTCGGTCGGATCGCTCCGGACGCTGGCCGG CTGCTTCGGGTTCTCCGGCGACGAGATCGACAAGCGCTGCAAGGTGCTCTCCGGCGGCGAGAAGGCGCGCCTCGTGCTCG CGACGCTGCTCTACGACCCGCCCAACTTCCTCGTGCTCGACGAGCCCACGAACCACCTCGACGCCGCCACCCGCGAGATG CTCGTGCGGGCGCTCGCCGGCTACGAGGGAACGCTCCTGTTCGTCTCGCACGACCGCCGGTTCCTGGCGTCCCTCTCGAA CCGCGTCCTCGAGCTCGGGCCCGATGGGCCCGTCCCGTACGGGGGCGGGTACACCGAGTACGTCGCCCGGACCGGCCGCG AGGCCCCCGGCCTGCGGGCCGCCCCCGGCCGCGCCGCGCGAGCCTAG
Upstream 100 bases:
>100_bases GCGACCACCGTCCTCATGGCCGGCACCGTAGCGCAGGGCCCGGGCGCCGTCGACGTGCCGGCTTGAACCGGGGCGTTGGG CGTGCGAGAACGCGCCCCTC
Downstream 100 bases:
>100_bases CCCGCCCTGCCCCGAACCCAGAGTCATTTGCCGGGTCCGGCGCTCGCGCTGGAAGCGCTCGAAACCACTCGGGATGGGTT CACGACGCGCGAAACGTTCG
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MIRLDAISKQHGNQLLFVEASAVVHRGEKVGLVGPNGAGKSTLFRLITREEAPDEGQVSIDRGVTVGHFSQDVGEMSGRT ALAETMDGAGPVSEVAAELHGLEQALADPERADELEALVERFGHVQARFDELGGYALEARAREILAGLGFTQEMMDGDVG ALSGGWKMRVALARILLMRPDAMLLDEPSNHLDLESIIWLEEFLRGYEGAILMTSHDREFMNRVVGKIIEIDAGTLTTYS GDYDLYERERAVADQHQQAAFDRQQAMLKKELAFIERFKARASHAAQVQSRVKKLDKIEKVEPPKVRRTVDFEFRPPPRS GEDVAKLAGVVKRYGERTVYGGLDFLVRRGERWCVLGANGAGKSTLLRMVAGESTPDAGSVTVGGSVKMGYFAQHAMELL RAEETVWDALQRAFPRASVGSLRTLAGCFGFSGDEIDKRCKVLSGGEKARLVLATLLYDPPNFLVLDEPTNHLDAATREM LVRALAGYEGTLLFVSHDRRFLASLSNRVLELGPDGPVPYGGGYTEYVARTGREAPGLRAAPGRAARA
Sequences:
>Translated_548_residues MIRLDAISKQHGNQLLFVEASAVVHRGEKVGLVGPNGAGKSTLFRLITREEAPDEGQVSIDRGVTVGHFSQDVGEMSGRT ALAETMDGAGPVSEVAAELHGLEQALADPERADELEALVERFGHVQARFDELGGYALEARAREILAGLGFTQEMMDGDVG ALSGGWKMRVALARILLMRPDAMLLDEPSNHLDLESIIWLEEFLRGYEGAILMTSHDREFMNRVVGKIIEIDAGTLTTYS GDYDLYERERAVADQHQQAAFDRQQAMLKKELAFIERFKARASHAAQVQSRVKKLDKIEKVEPPKVRRTVDFEFRPPPRS GEDVAKLAGVVKRYGERTVYGGLDFLVRRGERWCVLGANGAGKSTLLRMVAGESTPDAGSVTVGGSVKMGYFAQHAMELL RAEETVWDALQRAFPRASVGSLRTLAGCFGFSGDEIDKRCKVLSGGEKARLVLATLLYDPPNFLVLDEPTNHLDAATREM LVRALAGYEGTLLFVSHDRRFLASLSNRVLELGPDGPVPYGGGYTEYVARTGREAPGLRAAPGRAARA >Mature_548_residues MIRLDAISKQHGNQLLFVEASAVVHRGEKVGLVGPNGAGKSTLFRLITREEAPDEGQVSIDRGVTVGHFSQDVGEMSGRT ALAETMDGAGPVSEVAAELHGLEQALADPERADELEALVERFGHVQARFDELGGYALEARAREILAGLGFTQEMMDGDVG ALSGGWKMRVALARILLMRPDAMLLDEPSNHLDLESIIWLEEFLRGYEGAILMTSHDREFMNRVVGKIIEIDAGTLTTYS GDYDLYERERAVADQHQQAAFDRQQAMLKKELAFIERFKARASHAAQVQSRVKKLDKIEKVEPPKVRRTVDFEFRPPPRS GEDVAKLAGVVKRYGERTVYGGLDFLVRRGERWCVLGANGAGKSTLLRMVAGESTPDAGSVTVGGSVKMGYFAQHAMELL RAEETVWDALQRAFPRASVGSLRTLAGCFGFSGDEIDKRCKVLSGGEKARLVLATLLYDPPNFLVLDEPTNHLDAATREM LVRALAGYEGTLLFVSHDRRFLASLSNRVLELGPDGPVPYGGGYTEYVARTGREAPGLRAAPGRAARA
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=536, Percent_Identity=33.3955223880597, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI10947137, Length=509, Percent_Identity=33.7917485265226, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI27881506, Length=509, Percent_Identity=33.7917485265226, Blast_Score=256, Evalue=5e-68, Organism=Homo sapiens, GI10947135, Length=551, Percent_Identity=34.4827586206897, Blast_Score=229, Evalue=7e-60, Organism=Homo sapiens, GI69354671, Length=551, Percent_Identity=34.4827586206897, Blast_Score=228, Evalue=9e-60, Organism=Homo sapiens, GI42741659, Length=174, Percent_Identity=34.4827586206897, Blast_Score=71, Evalue=3e-12, Organism=Escherichia coli, GI1789751, Length=555, Percent_Identity=36.5765765765766, Blast_Score=377, Evalue=1e-105, Organism=Escherichia coli, GI1787041, Length=542, Percent_Identity=35.6088560885609, Blast_Score=325, Evalue=3e-90, Organism=Escherichia coli, GI2367384, Length=516, Percent_Identity=34.1085271317829, Blast_Score=269, Evalue=4e-73, Organism=Escherichia coli, GI1787182, Length=535, Percent_Identity=33.8317757009346, Blast_Score=260, Evalue=1e-70, Organism=Escherichia coli, GI87081709, Length=211, Percent_Identity=27.9620853080569, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787758, Length=181, Percent_Identity=28.7292817679558, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787164, Length=193, Percent_Identity=31.6062176165803, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1786872, Length=248, Percent_Identity=29.4354838709677, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI87081791, Length=202, Percent_Identity=28.2178217821782, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1788225, Length=253, Percent_Identity=28.0632411067194, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1786253, Length=201, Percent_Identity=31.8407960199005, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1788761, Length=211, Percent_Identity=29.3838862559242, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1789873, Length=225, Percent_Identity=28, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786803, Length=217, Percent_Identity=29.9539170506912, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI87081782, Length=185, Percent_Identity=29.7297297297297, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1787792, Length=214, Percent_Identity=26.6355140186916, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17553372, Length=552, Percent_Identity=32.2463768115942, Blast_Score=273, Evalue=1e-73, Organism=Caenorhabditis elegans, GI17555318, Length=527, Percent_Identity=33.965844402277, Blast_Score=272, Evalue=4e-73, Organism=Caenorhabditis elegans, GI17559834, Length=551, Percent_Identity=30.4900181488203, Blast_Score=252, Evalue=3e-67, Organism=Caenorhabditis elegans, GI115534520, Length=198, Percent_Identity=28.2828282828283, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=515, Percent_Identity=32.621359223301, Blast_Score=276, Evalue=8e-75, Organism=Saccharomyces cerevisiae, GI6320874, Length=549, Percent_Identity=30.7832422586521, Blast_Score=258, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6325030, Length=391, Percent_Identity=28.3887468030691, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6323278, Length=390, Percent_Identity=26.4102564102564, Blast_Score=126, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6324314, Length=390, Percent_Identity=26.4102564102564, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI24666836, Length=532, Percent_Identity=32.7067669172932, Blast_Score=289, Evalue=4e-78, Organism=Drosophila melanogaster, GI24642252, Length=516, Percent_Identity=32.3643410852713, Blast_Score=268, Evalue=6e-72, Organism=Drosophila melanogaster, GI18859989, Length=516, Percent_Identity=32.3643410852713, Blast_Score=268, Evalue=6e-72, Organism=Drosophila melanogaster, GI24641342, Length=503, Percent_Identity=33.3996023856859, Blast_Score=261, Evalue=1e-69, Organism=Drosophila melanogaster, GI24581191, Length=232, Percent_Identity=29.7413793103448, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24581189, Length=232, Percent_Identity=29.7413793103448, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24581193, Length=232, Percent_Identity=29.7413793103448, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24581195, Length=232, Percent_Identity=29.7413793103448, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI221512771, Length=164, Percent_Identity=32.9268292682927, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI221500365, Length=182, Percent_Identity=30.2197802197802, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI116007184, Length=182, Percent_Identity=30.2197802197802, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI28574150, Length=203, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI116007328, Length=203, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 59924; Mature: 59924
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS00178 AA_TRNA_LIGASE_I ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLDAISKQHGNQLLFVEASAVVHRGEKVGLVGPNGAGKSTLFRLITREEAPDEGQVSI CEEECCCHHCCCCEEEEEEHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEE DRGVTVGHFSQDVGEMSGRTALAETMDGAGPVSEVAAELHGLEQALADPERADELEALVE CCCCEECHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RFGHVQARFDELGGYALEARAREILAGLGFTQEMMDGDVGALSGGWKMRVALARILLMRP HHHHHHHHHHHHCCEEHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC DAMLLDEPSNHLDLESIIWLEEFLRGYEGAILMTSHDREFMNRVVGKIIEIDAGTLTTYS CCCEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHEEECCCEEEEEC GDYDLYERERAVADQHQQAAFDRQQAMLKKELAFIERFKARASHAAQVQSRVKKLDKIEK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VEPPKVRRTVDFEFRPPPRSGEDVAKLAGVVKRYGERTVYGGLDFLVRRGERWCVLGANG CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHCCCCEEEEECCC AGKSTLLRMVAGESTPDAGSVTVGGSVKMGYFAQHAMELLRAEETVWDALQRAFPRASVG CCHHHHHHHHHCCCCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH SLRTLAGCFGFSGDEIDKRCKVLSGGEKARLVLATLLYDPPNFLVLDEPTNHLDAATREM HHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH LVRALAGYEGTLLFVSHDRRFLASLSNRVLELGPDGPVPYGGGYTEYVARTGREAPGLRA HHHHHCCCCCEEEEEECCHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCC APGRAARA CCCCCCCC >Mature Secondary Structure MIRLDAISKQHGNQLLFVEASAVVHRGEKVGLVGPNGAGKSTLFRLITREEAPDEGQVSI CEEECCCHHCCCCEEEEEEHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEE DRGVTVGHFSQDVGEMSGRTALAETMDGAGPVSEVAAELHGLEQALADPERADELEALVE CCCCEECHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RFGHVQARFDELGGYALEARAREILAGLGFTQEMMDGDVGALSGGWKMRVALARILLMRP HHHHHHHHHHHHCCEEHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC DAMLLDEPSNHLDLESIIWLEEFLRGYEGAILMTSHDREFMNRVVGKIIEIDAGTLTTYS CCCEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHEEECCCEEEEEC GDYDLYERERAVADQHQQAAFDRQQAMLKKELAFIERFKARASHAAQVQSRVKKLDKIEK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VEPPKVRRTVDFEFRPPPRSGEDVAKLAGVVKRYGERTVYGGLDFLVRRGERWCVLGANG CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHCCCCEEEEECCC AGKSTLLRMVAGESTPDAGSVTVGGSVKMGYFAQHAMELLRAEETVWDALQRAFPRASVG CCHHHHHHHHHCCCCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH SLRTLAGCFGFSGDEIDKRCKVLSGGEKARLVLATLLYDPPNFLVLDEPTNHLDAATREM HHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH LVRALAGYEGTLLFVSHDRRFLASLSNRVLELGPDGPVPYGGGYTEYVARTGREAPGLRA HHHHHCCCCCEEEEEECCHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCC APGRAARA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]