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The map label for this gene is 220916797

Identifier: 220916797

GI number: 220916797

Start: 1883945

End: 1885312

Strand: Reverse

Name: 220916797

Synonym: A2cp1_1692

Alternate gene names: NA

Gene position: 1885312-1883945 (Counterclockwise)

Preceding gene: 220916798

Following gene: 220916796

Centisome position: 37.49

GC content: 78.29

Gene sequence:

>1368_bases
ATGATCCCTGCCGCGCTGGCGCTGGCCCTCGCCGCCGTCCCCGCCACCCTCGACGTCCCCGGCCTCGGGGCCGTGCCCGT
CTCCGCGCCGCCCGGGGCGCCGCAGCGGGCGATCCTGCTGGTCTCCGACGCGGGCGGTCGCGACGCCGCGCTCGACGACC
TGGCGCGCGCGCTCGCCGCGCGCGGCGCGCTGGTGGCGACGGTCGACCTCCGCGCGTACCTGCGCTCGGTGCGGGAGGCG
CGCTGCGCCTACCCCGCGGCGGATCTCGAGACGCTGGCCCAGCGGCTCCAGAAGCGCGCCGGCCTCGGCGCGTACCTGCG
GCCCATGCCGGTCGGCGTCGGCATGGGCGCGTCGCTCGCGTGGGCCGCGCTCGCCGAGGCGCCCGCGGGGACGTTCTCCG
GCGCGGCGCTCGTCGGGTTCTGCCCGTCCCGCCCGCTGCCGCTCCACCTGTGCCACGGCTCCGGCCCGCTGCCCGAGGCG
ACGCGCGGCGGCGAGGTCGTCCCGCCCGCGCCGCACCTCGACCAGCCGCTCGCGATCCTGGAGGAGGCCGCGCGTCCCGG
CTGCCCGGCGGGCGAGGTGCAGGAGTTCGCGCGCCAGATCCCGGGCGCGACGCTCGAGACCGTCCCCGCGGGCGCGACCG
CGGAGGCGCGGGCCGAGGCGGTGACCGCCCGGGCGCGCGCGCACGAGCTCACCGCCGCGGCCGCCGCCCCGCCCCCGCCC
ACCCCTCCGCCGGCGAACGCGCCGCCGGTCTCGGACCTGCCGGTGGTGGAGAACCCGGTCGCCGGATCGGGCCGCCGGAT
GGCCGTCATGCTCACCGGCGACGGCGGCTGGGTGGGGCTCGACAAGGGGCTGGCCAAGGCGATGGTCGCGGCCGGGGTGC
CGGTGGCCGGCCTCGACTCGCTCAAGTACTTCTGGACCGCCAGGACGCCGGAGCAGACCGCCGCGGACGTGGCCCGCATC
ATCGCGCACTACCGCGCGAAGTGGGGCCGCGACGAGGTGCTGCTCATCGGCTACTCGCGCGGCGCGGACATCGTCCCGTT
CCTGCCGCCGCGCATGCCGCCCGCCGAGCGCGCCGCCGTGAAGCTGGTGGCGATGCTCGGCCCGGAGTCCTTCGCCGAGT
TCGAGGTCCACGTGGTGGACCTGTTCACCTCGGTGCGCCGCGGCGCCGCCACCTCCACGCAGAAGGCGGTCGAGGCGCTG
GACGGCTCGGTGCGGATCCTCTGCGTCCAGGGCGTCGAGGAGAAGGACAGCGCCTGCCCGCTGATCGAGGGCCGGCCGGA
GGTCCGCCGGGTGGTGCTGCCCGGCGCGCACCACTTCGACCGCGACTACCCGAAGCTCGCCCGGCTGGTGCTCGAGGCGG
CGCCGTAG

Upstream 100 bases:

>100_bases
GGCCGCGCTGGCTGGCCGCGCCCGGCGGGCTCCGCCTCCCCGCCATCCTCGCGAACCTGGCCGCGCTCGTCTCGCGCGGC
CTGAAGGGCGTGGTGACCAA

Downstream 100 bases:

>100_bases
GCGAGGCGGGCGACCCGGCCCTCCCCTCGGGCGACCCCGTCGGCCCTGCTGCCGGCCGCGCCGCCGTGCGATGCTGCCGC
AGGGGAACGCGCCATGGGAC

Product: virulence factor family protein

Products: NA

Alternate protein names: Virulence Protein; Type IV Secretory Pathway VirJ Component-Like Protein; Acid lerance Protein; Type IV Secretion System VirJ-Like Protein; Acid Virulence Protein B; AcvB-Related Protein; Type IV Secretory Pathway VirJ Component-Like; Type IV Secretory Pathway Virj Component-Related Protein; Virj-Like Protein; Glycosyl Transferase/Polysaccharide Deacetylase; Type IV Secretory Pathway VirJ Component; Virulance And Acid lerance Protein; Type IV Secretion System Virj-Like Protein; Virulence Factor; Chromosomal Virulence Protein B

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MIPAALALALAAVPATLDVPGLGAVPVSAPPGAPQRAILLVSDAGGRDAALDDLARALAARGALVATVDLRAYLRSVREA
RCAYPAADLETLAQRLQKRAGLGAYLRPMPVGVGMGASLAWAALAEAPAGTFSGAALVGFCPSRPLPLHLCHGSGPLPEA
TRGGEVVPPAPHLDQPLAILEEAARPGCPAGEVQEFARQIPGATLETVPAGATAEARAEAVTARARAHELTAAAAAPPPP
TPPPANAPPVSDLPVVENPVAGSGRRMAVMLTGDGGWVGLDKGLAKAMVAAGVPVAGLDSLKYFWTARTPEQTAADVARI
IAHYRAKWGRDEVLLIGYSRGADIVPFLPPRMPPAERAAVKLVAMLGPESFAEFEVHVVDLFTSVRRGAATSTQKAVEAL
DGSVRILCVQGVEEKDSACPLIEGRPEVRRVVLPGAHHFDRDYPKLARLVLEAAP

Sequences:

>Translated_455_residues
MIPAALALALAAVPATLDVPGLGAVPVSAPPGAPQRAILLVSDAGGRDAALDDLARALAARGALVATVDLRAYLRSVREA
RCAYPAADLETLAQRLQKRAGLGAYLRPMPVGVGMGASLAWAALAEAPAGTFSGAALVGFCPSRPLPLHLCHGSGPLPEA
TRGGEVVPPAPHLDQPLAILEEAARPGCPAGEVQEFARQIPGATLETVPAGATAEARAEAVTARARAHELTAAAAAPPPP
TPPPANAPPVSDLPVVENPVAGSGRRMAVMLTGDGGWVGLDKGLAKAMVAAGVPVAGLDSLKYFWTARTPEQTAADVARI
IAHYRAKWGRDEVLLIGYSRGADIVPFLPPRMPPAERAAVKLVAMLGPESFAEFEVHVVDLFTSVRRGAATSTQKAVEAL
DGSVRILCVQGVEEKDSACPLIEGRPEVRRVVLPGAHHFDRDYPKLARLVLEAAP
>Mature_455_residues
MIPAALALALAAVPATLDVPGLGAVPVSAPPGAPQRAILLVSDAGGRDAALDDLARALAARGALVATVDLRAYLRSVREA
RCAYPAADLETLAQRLQKRAGLGAYLRPMPVGVGMGASLAWAALAEAPAGTFSGAALVGFCPSRPLPLHLCHGSGPLPEA
TRGGEVVPPAPHLDQPLAILEEAARPGCPAGEVQEFARQIPGATLETVPAGATAEARAEAVTARARAHELTAAAAAPPPP
TPPPANAPPVSDLPVVENPVAGSGRRMAVMLTGDGGWVGLDKGLAKAMVAAGVPVAGLDSLKYFWTARTPEQTAADVARI
IAHYRAKWGRDEVLLIGYSRGADIVPFLPPRMPPAERAAVKLVAMLGPESFAEFEVHVVDLFTSVRRGAATSTQKAVEAL
DGSVRILCVQGVEEKDSACPLIEGRPEVRRVVLPGAHHFDRDYPKLARLVLEAAP

Specific function: Unknown

COG id: COG3946

COG function: function code U; Type IV secretory pathway, VirJ component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46979; Mature: 46979

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPAALALALAAVPATLDVPGLGAVPVSAPPGAPQRAILLVSDAGGRDAALDDLARALAA
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
RGALVATVDLRAYLRSVREARCAYPAADLETLAQRLQKRAGLGAYLRPMPVGVGMGASLA
CCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
WAALAEAPAGTFSGAALVGFCPSRPLPLHLCHGSGPLPEATRGGEVVPPAPHLDQPLAIL
HHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH
EEAARPGCPAGEVQEFARQIPGATLETVPAGATAEARAEAVTARARAHELTAAAAAPPPP
HHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
TPPPANAPPVSDLPVVENPVAGSGRRMAVMLTGDGGWVGLDKGLAKAMVAAGVPVAGLDS
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCC
LKYFWTARTPEQTAADVARIIAHYRAKWGRDEVLLIGYSRGADIVPFLPPRMPPAERAAV
EEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHH
KLVAMLGPESFAEFEVHVVDLFTSVRRGAATSTQKAVEALDGSVRILCVQGVEEKDSACP
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCC
LIEGRPEVRRVVLPGAHHFDRDYPKLARLVLEAAP
CCCCCHHHEEEECCCCHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MIPAALALALAAVPATLDVPGLGAVPVSAPPGAPQRAILLVSDAGGRDAALDDLARALAA
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
RGALVATVDLRAYLRSVREARCAYPAADLETLAQRLQKRAGLGAYLRPMPVGVGMGASLA
CCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
WAALAEAPAGTFSGAALVGFCPSRPLPLHLCHGSGPLPEATRGGEVVPPAPHLDQPLAIL
HHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH
EEAARPGCPAGEVQEFARQIPGATLETVPAGATAEARAEAVTARARAHELTAAAAAPPPP
HHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
TPPPANAPPVSDLPVVENPVAGSGRRMAVMLTGDGGWVGLDKGLAKAMVAAGVPVAGLDS
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCC
LKYFWTARTPEQTAADVARIIAHYRAKWGRDEVLLIGYSRGADIVPFLPPRMPPAERAAV
EEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHH
KLVAMLGPESFAEFEVHVVDLFTSVRRGAATSTQKAVEALDGSVRILCVQGVEEKDSACP
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCC
LIEGRPEVRRVVLPGAHHFDRDYPKLARLVLEAAP
CCCCCHHHEEEECCCCHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA