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The map label for this gene is ccsA [H]

Identifier: 220916564

GI number: 220916564

Start: 1631720

End: 1632574

Strand: Direct

Name: ccsA [H]

Synonym: A2cp1_1458

Alternate gene names: 220916564

Gene position: 1631720-1632574 (Clockwise)

Preceding gene: 220916563

Following gene: 220916565

Centisome position: 32.44

GC content: 71.93

Gene sequence:

>855_bases
ATGAGCGTCATCATCCTGCGCGTCGCCGCCGCAATGTACGCGGCGGCCGCCACGTCCTACATCGTGTACTTCGCCCGCCC
TCGCCTGGCCCGCGCCGCCACCGCCGGCTACTGGCTGCTCGCGGCGGCGTTCGCCATCCACGCGGTCGCCATCGGCGTGG
GCTGCGCCGAGTTCGGCGGCCGCGAGTTCTTCAGCCTGCGCGGCGGGCTGGTCCTGATGGTCTGGCTGCTGGCGGGCGCG
TACCTGGTGCTCCAGCGGCGCTACCACCTGCCGACCGTGGGCGCGTTCATCACGCCGCTCATCCTGATCGTGCTCCTGCC
CGCGATGTTCGGCGACCCCGGCCACCCGGGCGTGCCGCCCGAGACGCTGCGGCACAAGTCGGTCACCATCCACATCCTCA
CCGCCGGCCTGGGCGTGGCGCTGTTCGGCCTCGCGTTCGCGGTGGCGCTCATGTACCTGCTCCAGGAGCGCGAGGTGAAG
GGCAAGCGCTTCGGCGCCCTGTTCTCCCGCCTGCCCTCGCTCGACGCGCTGGACAAGCTCAACCAGCGGCTGGTGCGCGC
CGGCTTCGTCTCGTACACCATCGCGCTCATCGCCGGCACGGTCACCGCCACCGCGATCTGGAAGAGCCCCTGGTCCTGGG
ACCCGCAGCAGGTCATCTCGCTGGGCGTCTGGATCCTGTACGGCGCCATGGTGCAGCTCCGCCACACCGGCTGGCACGGC
CGCCGGTACGCGCTCCTCACCCTGGTCGGGTTCGTGCTGGTGCTGGGCTCGATGGTGACCCTGAGGACCGTGCCGGGCGT
CACGCGCCACGCCGGGGACTACGCGGGGTCGGCCCACACCGGAGGGGCGCAGTGA

Upstream 100 bases:

>100_bases
GAGGCCCTCGCCCGTTTCCTGCTGGAGAACCTGTCTTGACCGGAGCCTCGGCCGGAGAGCGCGCGACGACGGCCCGGCCG
TCCGCCGCGGGGAAGCGACC

Downstream 100 bases:

>100_bases
CCGGCGATCGCCGCCTCTTCCTGGTCGGGCTCTCGCACAAGAGCGCGCCCATCGACGTCCGCGAGCGCGTGGCGCTGACC
GGCGACGCGCTCAAGGCGGC

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSVIILRVAAAMYAAAATSYIVYFARPRLARAATAGYWLLAAAFAIHAVAIGVGCAEFGGREFFSLRGGLVLMVWLLAGA
YLVLQRRYHLPTVGAFITPLILIVLLPAMFGDPGHPGVPPETLRHKSVTIHILTAGLGVALFGLAFAVALMYLLQEREVK
GKRFGALFSRLPSLDALDKLNQRLVRAGFVSYTIALIAGTVTATAIWKSPWSWDPQQVISLGVWILYGAMVQLRHTGWHG
RRYALLTLVGFVLVLGSMVTLRTVPGVTRHAGDYAGSAHTGGAQ

Sequences:

>Translated_284_residues
MSVIILRVAAAMYAAAATSYIVYFARPRLARAATAGYWLLAAAFAIHAVAIGVGCAEFGGREFFSLRGGLVLMVWLLAGA
YLVLQRRYHLPTVGAFITPLILIVLLPAMFGDPGHPGVPPETLRHKSVTIHILTAGLGVALFGLAFAVALMYLLQEREVK
GKRFGALFSRLPSLDALDKLNQRLVRAGFVSYTIALIAGTVTATAIWKSPWSWDPQQVISLGVWILYGAMVQLRHTGWHG
RRYALLTLVGFVLVLGSMVTLRTVPGVTRHAGDYAGSAHTGGAQ
>Mature_283_residues
SVIILRVAAAMYAAAATSYIVYFARPRLARAATAGYWLLAAAFAIHAVAIGVGCAEFGGREFFSLRGGLVLMVWLLAGAY
LVLQRRYHLPTVGAFITPLILIVLLPAMFGDPGHPGVPPETLRHKSVTIHILTAGLGVALFGLAFAVALMYLLQEREVKG
KRFGALFSRLPSLDALDKLNQRLVRAGFVSYTIALIAGTVTATAIWKSPWSWDPQQVISLGVWILYGAMVQLRHTGWHGR
RYALLTLVGFVLVLGSMVTLRTVPGVTRHAGDYAGSAHTGGAQ

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 30582; Mature: 30450

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVIILRVAAAMYAAAATSYIVYFARPRLARAATAGYWLLAAAFAIHAVAIGVGCAEFGG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
REFFSLRGGLVLMVWLLAGAYLVLQRRYHLPTVGAFITPLILIVLLPAMFGDPGHPGVPP
CHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
ETLRHKSVTIHILTAGLGVALFGLAFAVALMYLLQEREVKGKRFGALFSRLPSLDALDKL
HHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHH
NQRLVRAGFVSYTIALIAGTVTATAIWKSPWSWDPQQVISLGVWILYGAMVQLRHTGWHG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
RRYALLTLVGFVLVLGSMVTLRTVPGVTRHAGDYAGSAHTGGAQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA