Click here to switch to the map view.

The map label for this gene is trpH [H]

Identifier: 220916473

GI number: 220916473

Start: 1531101

End: 1531952

Strand: Direct

Name: trpH [H]

Synonym: A2cp1_1367

Alternate gene names: 220916473

Gene position: 1531101-1531952 (Clockwise)

Preceding gene: 220916469

Following gene: 220916485

Centisome position: 30.44

GC content: 74.41

Gene sequence:

>852_bases
ATGGGCAACCCGGCCGCCGGACAGGGCGTCAACGGAAAGATTGACCTGCACTCGCACAGCAGGGCGTCGGACGGCCAGTA
TCCCGCCGGCGAGGTAGCCGAGCGGGCGAGCGCGGCGGGCGTGGCCGTGTGGGCGCTCTGCGATCACGACACCGTGGCGG
GGATGGACGATGCGGCCGCCGCGGCCGCGCGGCTCGGGCTGCGGCTGGTGCCGGGGATCGAGCTCTCGGCGTTCCTGGAG
CGCCGCGAGATCCACCTGCTCGGCCACTTCGTGGACCCGGCGCACCCGCGCCTGCGCGCGTTCGAGGACTTCCTGGCGCT
GCGCCGGCGCGAGCGCATGGAGCGCATCGTGGAGAAGCTGGGCGCGCTCGGCCTGCGCCTCCGCGTCGAGGACATCGAGA
AGTGGAGCGGCGGCAAGACCATCGGCCGCCCGCACGTCGCCCGCGCGCTGGTCGAGCTGGGCGCGGTGGCCACCGTGAAG
GAGGCGTTCGACGCCTACCTCGGAGAGGGGAAGCCGGCGTACGTGCAGCGCTACCGCCTCGAGTCGGACGAGGCGGTCCG
GCTGGTGCGGGCCGCCGGCGGCACCACCACGGTCGCCCACCCCGGGGTCTCGAAGCTGGAGCGCTGGGACCTCGAGCGCC
TCCGCCAGGCCGGCGTCGAGGGGCTGGAGGTCTACCACGTGGATCACAACCCCTCGGTGCGCGAGAAGTACCTGCGCATC
GCCGAGGCGCTCGACCTCGTGCCCACCGCCGGCTCCGACTTCCACGGGGAGGCGGTCGCGCCCGACCGCCACCTCGGCGA
CGTGAGCATGCCCCCGCACGAGCTGGAGCGCCTCGAGGCGCGCCGGCCGTAG

Upstream 100 bases:

>100_bases
TGCATGAACGCTCGCCTTTCCGCGCGCCGGCCCCTCTCCCTTCCGGGCGCGCGCCGACCTGGAGAGACGGTTATCTTATC
ACGTTCGAGGTGCACAGTTC

Downstream 100 bases:

>100_bases
CCGCGCTCCCGCGGCGAGCCGGGCCCCGACGGCTCCGCCGGCGGGGCGAGGGCGCAGCCGAAGGACACCAGCAGGGAGGG
GCCCCAGCCGCAGGCTGGGG

Product: PHP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MGNPAAGQGVNGKIDLHSHSRASDGQYPAGEVAERASAAGVAVWALCDHDTVAGMDDAAAAAARLGLRLVPGIELSAFLE
RREIHLLGHFVDPAHPRLRAFEDFLALRRRERMERIVEKLGALGLRLRVEDIEKWSGGKTIGRPHVARALVELGAVATVK
EAFDAYLGEGKPAYVQRYRLESDEAVRLVRAAGGTTTVAHPGVSKLERWDLERLRQAGVEGLEVYHVDHNPSVREKYLRI
AEALDLVPTAGSDFHGEAVAPDRHLGDVSMPPHELERLEARRP

Sequences:

>Translated_283_residues
MGNPAAGQGVNGKIDLHSHSRASDGQYPAGEVAERASAAGVAVWALCDHDTVAGMDDAAAAAARLGLRLVPGIELSAFLE
RREIHLLGHFVDPAHPRLRAFEDFLALRRRERMERIVEKLGALGLRLRVEDIEKWSGGKTIGRPHVARALVELGAVATVK
EAFDAYLGEGKPAYVQRYRLESDEAVRLVRAAGGTTTVAHPGVSKLERWDLERLRQAGVEGLEVYHVDHNPSVREKYLRI
AEALDLVPTAGSDFHGEAVAPDRHLGDVSMPPHELERLEARRP
>Mature_282_residues
GNPAAGQGVNGKIDLHSHSRASDGQYPAGEVAERASAAGVAVWALCDHDTVAGMDDAAAAAARLGLRLVPGIELSAFLER
REIHLLGHFVDPAHPRLRAFEDFLALRRRERMERIVEKLGALGLRLRVEDIEKWSGGKTIGRPHVARALVELGAVATVKE
AFDAYLGEGKPAYVQRYRLESDEAVRLVRAAGGTTTVAHPGVSKLERWDLERLRQAGVEGLEVYHVDHNPSVREKYLRIA
EALDLVPTAGSDFHGEAVAPDRHLGDVSMPPHELERLEARRP

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=247, Percent_Identity=33.1983805668016, Blast_Score=127, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 30916; Mature: 30785

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNPAAGQGVNGKIDLHSHSRASDGQYPAGEVAERASAAGVAVWALCDHDTVAGMDDAAA
CCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHH
AAARLGLRLVPGIELSAFLERREIHLLGHFVDPAHPRLRAFEDFLALRRRERMERIVEKL
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GALGLRLRVEDIEKWSGGKTIGRPHVARALVELGAVATVKEAFDAYLGEGKPAYVQRYRL
HHCCEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
ESDEAVRLVRAAGGTTTVAHPGVSKLERWDLERLRQAGVEGLEVYHVDHNPSVREKYLRI
CCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH
AEALDLVPTAGSDFHGEAVAPDRHLGDVSMPPHELERLEARRP
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
GNPAAGQGVNGKIDLHSHSRASDGQYPAGEVAERASAAGVAVWALCDHDTVAGMDDAAA
CCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHH
AAARLGLRLVPGIELSAFLERREIHLLGHFVDPAHPRLRAFEDFLALRRRERMERIVEKL
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GALGLRLRVEDIEKWSGGKTIGRPHVARALVELGAVATVKEAFDAYLGEGKPAYVQRYRL
HHCCEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
ESDEAVRLVRAAGGTTTVAHPGVSKLERWDLERLRQAGVEGLEVYHVDHNPSVREKYLRI
CCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH
AEALDLVPTAGSDFHGEAVAPDRHLGDVSMPPHELERLEARRP
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]