| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is dut
Identifier: 220916342
GI number: 220916342
Start: 1387761
End: 1388204
Strand: Direct
Name: dut
Synonym: A2cp1_1236
Alternate gene names: 220916342
Gene position: 1387761-1388204 (Clockwise)
Preceding gene: 220916341
Following gene: 220916343
Centisome position: 27.59
GC content: 77.48
Gene sequence:
>444_bases ATGCCCGTGACCGTCCGAGTCCGCCGCGTCGGCCATCGCGGCCCCCCGCTCGATCTCCCCCGCTACGAGTCCGCCGGCGC CGCAGGCCTCGACCTGCGCGCCGACGAGCCGTTCACGCTCGCCCCGGGCGAGCGGCGGGTGGTCCCGACCGGCCTCGCGC TGGAGCTGCCGCCCGGCCACGAGGGCCAGGTGCGGCCGCGCTCCGGCCTGGCCGCGCGCCACGGCGTCGGCATGGTGAAC GCGCCGGGCACCATCGACGCGGACTACCGCGGCGAGGTGGGGGTCATCCTGGTGAACCACGGGCAGGCGCCGGTGGCGTT CGCCCGCGGCGATCGCATCGCCCAGCTCGTGATCGCGCCCGTGGTCCGGGCCGAGCTCGAGCTGGTGGACGCGCTGAGCG ACAGCGACCGAGGCGCCGGCGGCTTCGGCTCGACCGGCCAGTAG
Upstream 100 bases:
>100_bases CGCAAGGAGGCCCTCGCCGACAGCGCCAAGAAGTCCGAGGGCACCGAGCCGCCGAAGGGCGAGCCGGCCAAGTAGGCCGC GAGGGGCCGCGAGGACGCCG
Downstream 100 bases:
>100_bases CCTCACGGAGGACGCCATGATCCCGCGCTACACCCGGCCCGACATGGGCCGCATCTGGACTTCCGAGCACCGCTTCCGCA TCTGGCTCGACGTGGAGCTG
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MPVTVRVRRVGHRGPPLDLPRYESAGAAGLDLRADEPFTLAPGERRVVPTGLALELPPGHEGQVRPRSGLAARHGVGMVN APGTIDADYRGEVGVILVNHGQAPVAFARGDRIAQLVIAPVVRAELELVDALSDSDRGAGGFGSTGQ
Sequences:
>Translated_147_residues MPVTVRVRRVGHRGPPLDLPRYESAGAAGLDLRADEPFTLAPGERRVVPTGLALELPPGHEGQVRPRSGLAARHGVGMVN APGTIDADYRGEVGVILVNHGQAPVAFARGDRIAQLVIAPVVRAELELVDALSDSDRGAGGFGSTGQ >Mature_146_residues PVTVRVRRVGHRGPPLDLPRYESAGAAGLDLRADEPFTLAPGERRVVPTGLALELPPGHEGQVRPRSGLAARHGVGMVNA PGTIDADYRGEVGVILVNHGQAPVAFARGDRIAQLVIAPVVRAELELVDALSDSDRGAGGFGSTGQ
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family
Homologues:
Organism=Homo sapiens, GI70906444, Length=124, Percent_Identity=49.1935483870968, Blast_Score=116, Evalue=5e-27, Organism=Homo sapiens, GI4503423, Length=124, Percent_Identity=49.1935483870968, Blast_Score=116, Evalue=8e-27, Organism=Homo sapiens, GI70906441, Length=128, Percent_Identity=48.4375, Blast_Score=113, Evalue=5e-26, Organism=Escherichia coli, GI1790071, Length=142, Percent_Identity=44.3661971830986, Blast_Score=115, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71988561, Length=129, Percent_Identity=47.2868217054264, Blast_Score=108, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6319729, Length=143, Percent_Identity=40.5594405594406, Blast_Score=108, Evalue=3e-25, Organism=Drosophila melanogaster, GI24583610, Length=123, Percent_Identity=41.4634146341463, Blast_Score=98, Evalue=2e-21, Organism=Drosophila melanogaster, GI19921126, Length=123, Percent_Identity=41.4634146341463, Blast_Score=98, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DUT_ANAD2 (B8JFZ2)
Other databases:
- EMBL: CP001359 - RefSeq: YP_002491646.1 - ProteinModelPortal: B8JFZ2 - SMR: B8JFZ2 - GeneID: 7299102 - GenomeReviews: CP001359_GR - KEGG: acp:A2cp1_1236 - HOGENOM: HBG436079 - ProtClustDB: PRK00601 - HAMAP: MF_00116 - InterPro: IPR008180 - InterPro: IPR008181 - TIGRFAMs: TIGR00576
Pfam domain/function: PF00692 dUTPase
EC number: =3.6.1.23
Molecular weight: Translated: 15309; Mature: 15177
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: BINDING 80-80
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTVRVRRVGHRGPPLDLPRYESAGAAGLDLRADEPFTLAPGERRVVPTGLALELPPGH CCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCEEECCCEEEECCCCC EGQVRPRSGLAARHGVGMVNAPGTIDADYRGEVGVILVNHGQAPVAFARGDRIAQLVIAP CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCEEEECCCHHHHHHHHH VVRAELELVDALSDSDRGAGGFGSTGQ HHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PVTVRVRRVGHRGPPLDLPRYESAGAAGLDLRADEPFTLAPGERRVVPTGLALELPPGH CEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCEEECCCEEEECCCCC EGQVRPRSGLAARHGVGMVNAPGTIDADYRGEVGVILVNHGQAPVAFARGDRIAQLVIAP CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCEEEECCCHHHHHHHHH VVRAELELVDALSDSDRGAGGFGSTGQ HHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA