Click here to switch to the map view.

The map label for this gene is 220916287

Identifier: 220916287

GI number: 220916287

Start: 1318899

End: 1320344

Strand: Reverse

Name: 220916287

Synonym: A2cp1_1180

Alternate gene names: NA

Gene position: 1320344-1318899 (Counterclockwise)

Preceding gene: 220916288

Following gene: 220916286

Centisome position: 26.25

GC content: 75.17

Gene sequence:

>1446_bases
ATGCGCCCGCCCCCGATGCGCCCCGTCCCGCCCGAAGACCCGCTCGACCTGCACCACGAGGCCATCCGCCCGTTCGAGGA
GGCCGAGGCCGCGCTGGTCCGCTCGGTGGTGAGCACGCCCGCGTGGCTGTCCGAGCGAGACGAGGCGGCGCTCCGCTACG
CGCTCAACCTGGCGCGGATCGGCCGGATCCGCGCACCGGACGGCGGCGAGGTGGACCTCGAGCCCGCGCTCGCCCCGTTC
CGCGAGGACGTGCGCCCGCTCGTCTCGGCCCTGCTCGCGACCGGCGGACCGGATCGCGCCGCCGCGACCGGGATGGTGCC
GAACCTGTCGCTGCGCGCCCGCGCGTTCCGGGCGCGGGCCGTGGCGGCGGCGGAGGGGCGCCTCGCGCCCGGCGCGCTCG
ACCGCGAGGTCTGCGAGAAGGCGCTGGTGCTGGTGTGCGGCGGCGGCGGCGGCGTCGCCTGGTCGTACCTCGGCGCGTTC
GCGCTGCTCGAGCAGTACGGCCTCGTGCCGCGGCTGCTGGCCGGCACCAGCATGGGCTCGGTGCTGCTCCTGTTCCGGGC
GCGCCGCGCGCGCTGGAACCCGGACGACGTGGACGAGGCGCTGAGCGGGCTCTCCTTCCGCACGCTGTTCCGCTTCCTCC
AGACCGGGAACCGCTACGGCCTGCCCGCGGCGCTGCGCCTGTACCTGCGCGCCGCCATCGGCGAGTTCCTGAAGGGCCCG
GACGGCCACCCGCTCACGCTCGGGCAGCTCGCGGTGCCGCTGGTGGTGGCGGTCACCGGGATCCGCAACGGCGCCCTGCC
GCGCGACCCGGGCTACTACGAGCACCTGCTCGACCTGGACGCCCGCGCGCCGCGGCCGAGCGCGCTCACCCGCATGTTCT
CCGACGTGCTGCAGGCGGTGGGCGAGCTCATCGTGCAGCGCGACCGGTTCGCCCGCATCTACCTGGGCGCCGACGCCGAG
ACGCACGCGTTCGACGCCATCGACGCGGTGGGCTTCTCCTCCGCCCTGCCCGGCGTCATCCACTACGACGTGCTGCGCGA
CGACGAGCGCATGCACCGCCTGCTCGGCGCCCTGCTCGAGAAGCACGACGTGTTCCGGCTCGTCGACGGCGGCCTGGTGG
ACAACCTCCCTGCGCGGGCGGCGTGGTCCACGGTGCAGCGCGGCGCCATCGGCACGCGGAACGCGTTCGTGCTCGCGCTG
GAGGGCTTCGCGCCCAAGCTCTCCCAGCCGCTCTGGTTCGGGCTGGAGCAGCTCGCCGCGCAGAACGTGACCCGCAACCG
GCCGTTCGCCCACCACCACCGGTCGTTCCAGAAGGTGCTCTCGCCGGTCGAGATCGTGCCCTCGCGGGAGGAGCTGCGGC
ACGCCATCCACGCCGGGAAGGCCGAGCTGCACCCCGACATGCCGTTCGTCGCGCGGATGGTGCGGCCGTTCGCGCCGCTC
GCCTGA

Upstream 100 bases:

>100_bases
GGCGTTCGACGACGTCGTGCGCTGACGCCGCGCCCGCGGCGCCGCCCGCCGGCCGGGTGCGCCGAGGTGGGGTACGGGCG
CGTCGGGGCCGCGGCGTAGA

Downstream 100 bases:

>100_bases
CCGCGCGCCCGCGCTCCACCGGCGGTGCGCCCCCGCGCATCGTGCGATTGAATCCCGCGGCGCGTTGGGGCATCTTCGTC
GACCCACTCCCACCAACCTC

Product: Patatin

Products: NA

Alternate protein names: Patatin-Like Phospholipase Family Protein

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MRPPPMRPVPPEDPLDLHHEAIRPFEEAEAALVRSVVSTPAWLSERDEAALRYALNLARIGRIRAPDGGEVDLEPALAPF
REDVRPLVSALLATGGPDRAAATGMVPNLSLRARAFRARAVAAAEGRLAPGALDREVCEKALVLVCGGGGGVAWSYLGAF
ALLEQYGLVPRLLAGTSMGSVLLLFRARRARWNPDDVDEALSGLSFRTLFRFLQTGNRYGLPAALRLYLRAAIGEFLKGP
DGHPLTLGQLAVPLVVAVTGIRNGALPRDPGYYEHLLDLDARAPRPSALTRMFSDVLQAVGELIVQRDRFARIYLGADAE
THAFDAIDAVGFSSALPGVIHYDVLRDDERMHRLLGALLEKHDVFRLVDGGLVDNLPARAAWSTVQRGAIGTRNAFVLAL
EGFAPKLSQPLWFGLEQLAAQNVTRNRPFAHHHRSFQKVLSPVEIVPSREELRHAIHAGKAELHPDMPFVARMVRPFAPL
A

Sequences:

>Translated_481_residues
MRPPPMRPVPPEDPLDLHHEAIRPFEEAEAALVRSVVSTPAWLSERDEAALRYALNLARIGRIRAPDGGEVDLEPALAPF
REDVRPLVSALLATGGPDRAAATGMVPNLSLRARAFRARAVAAAEGRLAPGALDREVCEKALVLVCGGGGGVAWSYLGAF
ALLEQYGLVPRLLAGTSMGSVLLLFRARRARWNPDDVDEALSGLSFRTLFRFLQTGNRYGLPAALRLYLRAAIGEFLKGP
DGHPLTLGQLAVPLVVAVTGIRNGALPRDPGYYEHLLDLDARAPRPSALTRMFSDVLQAVGELIVQRDRFARIYLGADAE
THAFDAIDAVGFSSALPGVIHYDVLRDDERMHRLLGALLEKHDVFRLVDGGLVDNLPARAAWSTVQRGAIGTRNAFVLAL
EGFAPKLSQPLWFGLEQLAAQNVTRNRPFAHHHRSFQKVLSPVEIVPSREELRHAIHAGKAELHPDMPFVARMVRPFAPL
A
>Mature_481_residues
MRPPPMRPVPPEDPLDLHHEAIRPFEEAEAALVRSVVSTPAWLSERDEAALRYALNLARIGRIRAPDGGEVDLEPALAPF
REDVRPLVSALLATGGPDRAAATGMVPNLSLRARAFRARAVAAAEGRLAPGALDREVCEKALVLVCGGGGGVAWSYLGAF
ALLEQYGLVPRLLAGTSMGSVLLLFRARRARWNPDDVDEALSGLSFRTLFRFLQTGNRYGLPAALRLYLRAAIGEFLKGP
DGHPLTLGQLAVPLVVAVTGIRNGALPRDPGYYEHLLDLDARAPRPSALTRMFSDVLQAVGELIVQRDRFARIYLGADAE
THAFDAIDAVGFSSALPGVIHYDVLRDDERMHRLLGALLEKHDVFRLVDGGLVDNLPARAAWSTVQRGAIGTRNAFVLAL
EGFAPKLSQPLWFGLEQLAAQNVTRNRPFAHHHRSFQKVLSPVEIVPSREELRHAIHAGKAELHPDMPFVARMVRPFAPL
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52464; Mature: 52464

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPPPMRPVPPEDPLDLHHEAIRPFEEAEAALVRSVVSTPAWLSERDEAALRYALNLARI
CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GRIRAPDGGEVDLEPALAPFREDVRPLVSALLATGGPDRAAATGMVPNLSLRARAFRARA
CCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHH
VAAAEGRLAPGALDREVCEKALVLVCGGGGGVAWSYLGAFALLEQYGLVPRLLAGTSMGS
HHHHCCCCCCCCCCHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHH
VLLLFRARRARWNPDDVDEALSGLSFRTLFRFLQTGNRYGLPAALRLYLRAAIGEFLKGP
HHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
DGHPLTLGQLAVPLVVAVTGIRNGALPRDPGYYEHLLDLDARAPRPSALTRMFSDVLQAV
CCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GELIVQRDRFARIYLGADAETHAFDAIDAVGFSSALPGVIHYDVLRDDERMHRLLGALLE
HHHHHHHHHHEEEEECCCCCHHHHHHHHHHCHHHHCCCCEEHHHHCCHHHHHHHHHHHHH
KHDVFRLVDGGLVDNLPARAAWSTVQRGAIGTRNAFVLALEGFAPKLSQPLWFGLEQLAA
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
QNVTRNRPFAHHHRSFQKVLSPVEIVPSREELRHAIHAGKAELHPDMPFVARMVRPFAPL
HHHHCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHCCCC
A
C
>Mature Secondary Structure
MRPPPMRPVPPEDPLDLHHEAIRPFEEAEAALVRSVVSTPAWLSERDEAALRYALNLARI
CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GRIRAPDGGEVDLEPALAPFREDVRPLVSALLATGGPDRAAATGMVPNLSLRARAFRARA
CCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHH
VAAAEGRLAPGALDREVCEKALVLVCGGGGGVAWSYLGAFALLEQYGLVPRLLAGTSMGS
HHHHCCCCCCCCCCHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHH
VLLLFRARRARWNPDDVDEALSGLSFRTLFRFLQTGNRYGLPAALRLYLRAAIGEFLKGP
HHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
DGHPLTLGQLAVPLVVAVTGIRNGALPRDPGYYEHLLDLDARAPRPSALTRMFSDVLQAV
CCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GELIVQRDRFARIYLGADAETHAFDAIDAVGFSSALPGVIHYDVLRDDERMHRLLGALLE
HHHHHHHHHHEEEEECCCCCHHHHHHHHHHCHHHHCCCCEEHHHHCCHHHHHHHHHHHHH
KHDVFRLVDGGLVDNLPARAAWSTVQRGAIGTRNAFVLALEGFAPKLSQPLWFGLEQLAA
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
QNVTRNRPFAHHHRSFQKVLSPVEIVPSREELRHAIHAGKAELHPDMPFVARMVRPFAPL
HHHHCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA