| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220916128
Identifier: 220916128
GI number: 220916128
Start: 1141388
End: 1141867
Strand: Reverse
Name: 220916128
Synonym: A2cp1_1015
Alternate gene names: NA
Gene position: 1141867-1141388 (Counterclockwise)
Preceding gene: 220916131
Following gene: 220916125
Centisome position: 22.7
GC content: 70.42
Gene sequence:
>480_bases ATGGCACGCGTGGAGAAGAGCATCGAGATCGACCGCCCCGTGCGGACGGTCTACGACCAGTGGACGCAGTTCGAGGAGTT CCCGCGCTTCATGGAGGGCGTCGAGGCGGTGCACCAGCTCGACGAGCGGACGCTGCACTGGGTCGCGAAGATCGCCGGGA AGCGCGAGGAGTGGGAGGCCGAGATCGTGCAGCAGATGCCCGACCAGCAGATCGCCTGGCGCCACACCCGCGGCGCGGTG AACCGCGGCGTGGTGACGTTCACGCCCATCGACGACGGGCACTGCCGCGTGACGCTCGCGCTCGAGTACGACCCGCAGGG CTTCGTGGAGAAGGCGGGGGACATCCTCGGCGTGGTGTCGCGGCGCGTGGAGGGCGACCTCGAGCGCTTCAAGCGCTACA TCGAGGAGCGGGGCGTCGAGTCCGGCGGCTGGCGCGGCGAGATCCGCCCCGGCGAGCCGCACCACGATCCCATGCGCTGA
Upstream 100 bases:
>100_bases GCCCCGGCGGACGGACCGGGGCCCTCCGGCCGCGCGCCACCGCGGGCGTCCGGACGCACCAGGGGTCCATGCCTAGGTTC GCGGGTACGAGGAGGACGAC
Downstream 100 bases:
>100_bases TCACCAGACCGCGCGGTGGTCCTCCACCACCCCGGGCAGCCCGGCGACGGCCAGCGCACCGCCGCCGGGCGCGGGGAGCA CCCCCTCGAACGTCCCCGCC
Product: cyclase/dehydrase
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MARVEKSIEIDRPVRTVYDQWTQFEEFPRFMEGVEAVHQLDERTLHWVAKIAGKREEWEAEIVQQMPDQQIAWRHTRGAV NRGVVTFTPIDDGHCRVTLALEYDPQGFVEKAGDILGVVSRRVEGDLERFKRYIEERGVESGGWRGEIRPGEPHHDPMR
Sequences:
>Translated_159_residues MARVEKSIEIDRPVRTVYDQWTQFEEFPRFMEGVEAVHQLDERTLHWVAKIAGKREEWEAEIVQQMPDQQIAWRHTRGAV NRGVVTFTPIDDGHCRVTLALEYDPQGFVEKAGDILGVVSRRVEGDLERFKRYIEERGVESGGWRGEIRPGEPHHDPMR >Mature_158_residues ARVEKSIEIDRPVRTVYDQWTQFEEFPRFMEGVEAVHQLDERTLHWVAKIAGKREEWEAEIVQQMPDQQIAWRHTRGAVN RGVVTFTPIDDGHCRVTLALEYDPQGFVEKAGDILGVVSRRVEGDLERFKRYIEERGVESGGWRGEIRPGEPHHDPMR
Specific function: Unknown
COG id: COG5637
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 18565; Mature: 18434
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVEKSIEIDRPVRTVYDQWTQFEEFPRFMEGVEAVHQLDERTLHWVAKIAGKREEWEA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EIVQQMPDQQIAWRHTRGAVNRGVVTFTPIDDGHCRVTLALEYDPQGFVEKAGDILGVVS HHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHH RRVEGDLERFKRYIEERGVESGGWRGEIRPGEPHHDPMR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARVEKSIEIDRPVRTVYDQWTQFEEFPRFMEGVEAVHQLDERTLHWVAKIAGKREEWEA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EIVQQMPDQQIAWRHTRGAVNRGVVTFTPIDDGHCRVTLALEYDPQGFVEKAGDILGVVS HHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHH RRVEGDLERFKRYIEERGVESGGWRGEIRPGEPHHDPMR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA