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The map label for this gene is 220916125

Identifier: 220916125

GI number: 220916125

Start: 1138314

End: 1139054

Strand: Reverse

Name: 220916125

Synonym: A2cp1_1012

Alternate gene names: NA

Gene position: 1139054-1138314 (Counterclockwise)

Preceding gene: 220916128

Following gene: 220916119

Centisome position: 22.65

GC content: 70.72

Gene sequence:

>741_bases
GTGATCCCGCTCAGCGACGACGTCCCCACCGAACGCACACCGGCGGTCACCCTGCTCTTCATCGCGGCGAACGTGCTCGC
GTTCCTGTGGCAGGTGGACGTGCTCGCCCTGCCCGACGCGCTCGCCTCCGGCCGCCTCATGGAGTACGTGGGCGCGCGCC
TGGGCGACACCGCGCTCCGCGGCGGGGTGGTGCCGTTCGAGATCCTGACGTTCTCCGACGTCTACCCGCGCGATCTCGTG
CCGCCGCCGCTCACCGTCCTCACCGCCATGTTCCTGCACGGGGGGCTGGTCCACGTCGGCTCCAACATGCTGTTCCTGTG
GATCTTCGGGAACAACGTGGAGGACGCGCTGGGACGCGGGCGCTTCGTGCTGTTCTACCTGGCGTGCGGCGTGGTGGCCG
CGGTGGTCCAGGTGGTCGCCTCGGCGGCCACCGGCGATCTCGAGGTCCCGATGGTGGGCGCGAGCGGCGCCATCGCCGGC
GTGCTGGCCGCCTACATGGTGCTGTTCCCCCGGGCCCGGGTGACCACGCTCGTCATCATCGTGATCTTCATCCGGATCAT
CCCGGTGCCGGCCGCGTTCTTCATCGGCCTGTGGTTCCTGCTGCAGGTCCTCTCCATCTTCTTCGGCGGCAACACCGGCG
TGGCGCTGTTCGCGCACGTGGGCGGGTTCGTGGCGGGATGGCTGCTGGTGCGGCTCATGGGGCGGCGCCCGACCTGGCGC
GCGCGCCGGGTGAGCTGGTAG

Upstream 100 bases:

>100_bases
TCCTCCGGGCGACACCGCCACGACACGGATGTCAGAGCGGACGATCGGGTCACCGGGTGGGCGGGCGGCCTTATAGCATT
GCCGGCCGAGGCGAGCCCAC

Downstream 100 bases:

>100_bases
CCGCGGGGGCCGCGATCAGACCAGCGAGCCCTGCTTGCCACCGGGGCGGTCGCGCCCGAGGTGCGCGTACGCGGCGGGCA
GCGCCACCCGCCCGCGCGGC

Product: Rhomboid family protein

Products: NA

Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Peptidase Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Transmembrane Rhomboid Family Protein; Rhomboid Serine Protease; Rhomboid Family Membrane Protein; Membrane Associated Serine Protease; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MIPLSDDVPTERTPAVTLLFIAANVLAFLWQVDVLALPDALASGRLMEYVGARLGDTALRGGVVPFEILTFSDVYPRDLV
PPPLTVLTAMFLHGGLVHVGSNMLFLWIFGNNVEDALGRGRFVLFYLACGVVAAVVQVVASAATGDLEVPMVGASGAIAG
VLAAYMVLFPRARVTTLVIIVIFIRIIPVPAAFFIGLWFLLQVLSIFFGGNTGVALFAHVGGFVAGWLLVRLMGRRPTWR
ARRVSW

Sequences:

>Translated_246_residues
MIPLSDDVPTERTPAVTLLFIAANVLAFLWQVDVLALPDALASGRLMEYVGARLGDTALRGGVVPFEILTFSDVYPRDLV
PPPLTVLTAMFLHGGLVHVGSNMLFLWIFGNNVEDALGRGRFVLFYLACGVVAAVVQVVASAATGDLEVPMVGASGAIAG
VLAAYMVLFPRARVTTLVIIVIFIRIIPVPAAFFIGLWFLLQVLSIFFGGNTGVALFAHVGGFVAGWLLVRLMGRRPTWR
ARRVSW
>Mature_246_residues
MIPLSDDVPTERTPAVTLLFIAANVLAFLWQVDVLALPDALASGRLMEYVGARLGDTALRGGVVPFEILTFSDVYPRDLV
PPPLTVLTAMFLHGGLVHVGSNMLFLWIFGNNVEDALGRGRFVLFYLACGVVAAVVQVVASAATGDLEVPMVGASGAIAG
VLAAYMVLFPRARVTTLVIIVIFIRIIPVPAAFFIGLWFLLQVLSIFFGGNTGVALFAHVGGFVAGWLLVRLMGRRPTWR
ARRVSW

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26494; Mature: 26494

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLSDDVPTERTPAVTLLFIAANVLAFLWQVDVLALPDALASGRLMEYVGARLGDTALR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHCCHHHH
GGVVPFEILTFSDVYPRDLVPPPLTVLTAMFLHGGLVHVGSNMLFLWIFGNNVEDALGRG
CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHEECCCEEEEEEECCCHHHHHCCC
RFVLFYLACGVVAAVVQVVASAATGDLEVPMVGASGAIAGVLAAYMVLFPRARVTTLVII
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHH
VIFIRIIPVPAAFFIGLWFLLQVLSIFFGGNTGVALFAHVGGFVAGWLLVRLMGRRPTWR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
ARRVSW
CCCCCC
>Mature Secondary Structure
MIPLSDDVPTERTPAVTLLFIAANVLAFLWQVDVLALPDALASGRLMEYVGARLGDTALR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHCCHHHH
GGVVPFEILTFSDVYPRDLVPPPLTVLTAMFLHGGLVHVGSNMLFLWIFGNNVEDALGRG
CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHEECCCEEEEEEECCCHHHHHCCC
RFVLFYLACGVVAAVVQVVASAATGDLEVPMVGASGAIAGVLAAYMVLFPRARVTTLVII
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHH
VIFIRIIPVPAAFFIGLWFLLQVLSIFFGGNTGVALFAHVGGFVAGWLLVRLMGRRPTWR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
ARRVSW
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA