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The map label for this gene is sufD [C]

Identifier: 220916009

GI number: 220916009

Start: 1014218

End: 1015531

Strand: Direct

Name: sufD [C]

Synonym: A2cp1_0895

Alternate gene names: 220916009

Gene position: 1014218-1015531 (Clockwise)

Preceding gene: 220916008

Following gene: 220916010

Centisome position: 20.17

GC content: 78.08

Gene sequence:

>1314_bases
GTGACCCCGGCGGAGCAGAGCCTGGCGGCCGCGTTCCGCGGCGGCGCGGGCGAGCCGGCCTGGCTGGCGGACGCGCGCGC
GGGTGCGCTCGCGGCCTTCCGCGCGGCCGGCCTGCCCACCCCCCGCCACGAGGACTGGCGCTTCACCAGCCTGGCCGCGC
TCTCGACGCTGTCGCTCGCGCCCGCGCCGGACGACGGCGAGGGCCCCGCGCGCGCGCTGCTCGCCGGCCGGCCCGCGCCC
GAGGGCGCGCGCCTGGTGTTCGAGAACGGCCGCTTCCGCCGCGAGCTGTCGAGCGGGGCGCCGCTCCCGGCCGGCGCGGT
CCTGGGGAGCCTGGCGGACGCGCTCCGCCACGCGCCCGAGGCGGTGCGGCCGCACCTCGGCCGCCTGGCCCGCGTGGACG
GGCTCGCGTTCACCGCGCTGAACGGCGCCCTGCTGGAGGACGGCGCGTTCCTGCTGCTGCCCCCGGGCGCGCGCGTGGAG
GCGCCCATCGAGCTCGTCTTCGCGACCGGCGCGGCCGGGCGCGCGGTGGCGGTGCACCCGCGGGTGCTGGTGGTGGCCGG
CGAGGGCGCCCGGGCCACGCTCGCGGAGGTGCACCTCGGAACGAGCGACACGTACCTCGCCAACTCGGTGACGGAGCTGG
TGCTGGGCGAGGGCGCCGAGATCGAGCACCTCCGGCTCCAGGACGAGGGCGCGCGCGCGTTCCACGTGAGCGCGCTGTTC
GCCGAGCAGGCGGCCCGCTCGCGCCTCACCGCGCACGGCCTGGCGCTGGGGGGGCAGCTCGCGCGCAGCGAGGTGCGGGC
GCGGCTGGCCGGCGAGGGCGCGGAGCTGGCCGTTTCGGGGCTCTACATGGCCGACGGCGCGCGCACCACCGACGCGTTCA
CCTGGGTGGAGCACGCGGTCCCGCGCTGCACCACCACCGAGACGTACAAGGGCATCCTGGACGGCCGCGCGCGCGGCGTG
TTCGCCGGGCGGATCGTGGTCCAGCCGGGCGCGCAGAAGACCAGCGCGCGCCAGATGAACTCGAACCTGCTCCTCTCCGA
CGACGCCATCGTGGACACGAAGCCCCAGCTCGAGATCTTCGCGGACGACGTGAAGTGCGGCCACGGCGGCACCGTGGGCC
AGCTCGACGAGGCGGCGCTGTTCTACCTGCGCTCGCGCGGGGTGGAGGAGGCCGAGGCCCGCAGCCTGCTCATCTGGGCG
TTCGCGGCGGAGATGGTGGACCTGGTGCGGCCGGCCGGCCTGCACGCGCGCGCGCGGGAGCTCGTCGCGGCGCGGCTGCC
GGCGGGGCGGAAGGTGCTGGAGGCGGCGGCATGA

Upstream 100 bases:

>100_bases
GCGGGCCGGAGCTGGCCGACGAGCTGGAGCGCACCGGCTACGCCTGGGTGGACGGCGCGCGGCCGGAGGTGGAGCGCGCC
GCCAGCGCGGGGGCGCTGTC

Downstream 100 bases:

>100_bases
GCACGGCGGAGGCACAGGCGGCCGGCGGGCGGGCGGCGCGGCCGGAGGCGCGCGAGGGCGCGCGCGGCGCGTTCGACGTC
GAGCGGGTGCGGGCCGAGTT

Product: FeS assembly protein SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MTPAEQSLAAAFRGGAGEPAWLADARAGALAAFRAAGLPTPRHEDWRFTSLAALSTLSLAPAPDDGEGPARALLAGRPAP
EGARLVFENGRFRRELSSGAPLPAGAVLGSLADALRHAPEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPPGARVE
APIELVFATGAAGRAVAVHPRVLVVAGEGARATLAEVHLGTSDTYLANSVTELVLGEGAEIEHLRLQDEGARAFHVSALF
AEQAARSRLTAHGLALGGQLARSEVRARLAGEGAELAVSGLYMADGARTTDAFTWVEHAVPRCTTTETYKGILDGRARGV
FAGRIVVQPGAQKTSARQMNSNLLLSDDAIVDTKPQLEIFADDVKCGHGGTVGQLDEAALFYLRSRGVEEAEARSLLIWA
FAAEMVDLVRPAGLHARARELVAARLPAGRKVLEAAA

Sequences:

>Translated_437_residues
MTPAEQSLAAAFRGGAGEPAWLADARAGALAAFRAAGLPTPRHEDWRFTSLAALSTLSLAPAPDDGEGPARALLAGRPAP
EGARLVFENGRFRRELSSGAPLPAGAVLGSLADALRHAPEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPPGARVE
APIELVFATGAAGRAVAVHPRVLVVAGEGARATLAEVHLGTSDTYLANSVTELVLGEGAEIEHLRLQDEGARAFHVSALF
AEQAARSRLTAHGLALGGQLARSEVRARLAGEGAELAVSGLYMADGARTTDAFTWVEHAVPRCTTTETYKGILDGRARGV
FAGRIVVQPGAQKTSARQMNSNLLLSDDAIVDTKPQLEIFADDVKCGHGGTVGQLDEAALFYLRSRGVEEAEARSLLIWA
FAAEMVDLVRPAGLHARARELVAARLPAGRKVLEAAA
>Mature_436_residues
TPAEQSLAAAFRGGAGEPAWLADARAGALAAFRAAGLPTPRHEDWRFTSLAALSTLSLAPAPDDGEGPARALLAGRPAPE
GARLVFENGRFRRELSSGAPLPAGAVLGSLADALRHAPEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPPGARVEA
PIELVFATGAAGRAVAVHPRVLVVAGEGARATLAEVHLGTSDTYLANSVTELVLGEGAEIEHLRLQDEGARAFHVSALFA
EQAARSRLTAHGLALGGQLARSEVRARLAGEGAELAVSGLYMADGARTTDAFTWVEHAVPRCTTTETYKGILDGRARGVF
AGRIVVQPGAQKTSARQMNSNLLLSDDAIVDTKPQLEIFADDVKCGHGGTVGQLDEAALFYLRSRGVEEAEARSLLIWAF
AAEMVDLVRPAGLHARARELVAARLPAGRKVLEAAA

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=400, Percent_Identity=32.75, Blast_Score=194, Evalue=7e-51,
Organism=Escherichia coli, GI87081955, Length=456, Percent_Identity=22.5877192982456, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 45588; Mature: 45457

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAEQSLAAAFRGGAGEPAWLADARAGALAAFRAAGLPTPRHEDWRFTSLAALSTLSLA
CCCCHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC
PAPDDGEGPARALLAGRPAPEGARLVFENGRFRRELSSGAPLPAGAVLGSLADALRHAPE
CCCCCCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHCHH
AVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPPGARVEAPIELVFATGAAGRAVAVHP
HHHHHHHHHHHHCCEEEEEECCCEECCCCEEEECCCCCCCCCEEEEEECCCCCCEEEECC
RVLVVAGEGARATLAEVHLGTSDTYLANSVTELVLGEGAEIEHLRLQDEGARAFHVSALF
EEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEHHHHH
AEQAARSRLTAHGLALGGQLARSEVRARLAGEGAELAVSGLYMADGARTTDAFTWVEHAV
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHC
PRCTTTETYKGILDGRARGVFAGRIVVQPGAQKTSARQMNSNLLLSDDAIVDTKPQLEIF
CCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHCCCCEEEECCCEECCCCCEEEE
ADDVKCGHGGTVGQLDEAALFYLRSRGVEEAEARSLLIWAFAAEMVDLVRPAGLHARARE
ECCEECCCCCCCCCHHHHHHHHHHHCCCCCHHHCEEEHHHHHHHHHHHHCCCCCHHHHHH
LVAARLPAGRKVLEAAA
HHHHHCCCCHHHHHHCC
>Mature Secondary Structure 
TPAEQSLAAAFRGGAGEPAWLADARAGALAAFRAAGLPTPRHEDWRFTSLAALSTLSLA
CCCHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC
PAPDDGEGPARALLAGRPAPEGARLVFENGRFRRELSSGAPLPAGAVLGSLADALRHAPE
CCCCCCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHCHH
AVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPPGARVEAPIELVFATGAAGRAVAVHP
HHHHHHHHHHHHCCEEEEEECCCEECCCCEEEECCCCCCCCCEEEEEECCCCCCEEEECC
RVLVVAGEGARATLAEVHLGTSDTYLANSVTELVLGEGAEIEHLRLQDEGARAFHVSALF
EEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEHHHHH
AEQAARSRLTAHGLALGGQLARSEVRARLAGEGAELAVSGLYMADGARTTDAFTWVEHAV
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHC
PRCTTTETYKGILDGRARGVFAGRIVVQPGAQKTSARQMNSNLLLSDDAIVDTKPQLEIF
CCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHCCCCEEEECCCEECCCCCEEEE
ADDVKCGHGGTVGQLDEAALFYLRSRGVEEAEARSLLIWAFAAEMVDLVRPAGLHARARE
ECCEECCCCCCCCCHHHHHHHHHHHCCCCCHHHCEEEHHHHHHHHHHHHCCCCCHHHHHH
LVAARLPAGRKVLEAAA
HHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]