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The map label for this gene is yebA [H]

Identifier: 220915887

GI number: 220915887

Start: 866752

End: 867669

Strand: Direct

Name: yebA [H]

Synonym: A2cp1_0771

Alternate gene names: 220915887

Gene position: 866752-867669 (Clockwise)

Preceding gene: 220915886

Following gene: 220915889

Centisome position: 17.23

GC content: 70.37

Gene sequence:

>918_bases
ATGGCGGTACCGCCCAAGACCCAGGTGTTCACGGTCATCGTGGTCTCCGACCACTCGCAGGCGATCCGCAAGTTCCGCGT
CCCCCAGAAGTGGCTGAAGAAGGCGGCTTACGGCGGCGGTGCCGTCGTGCTGGTCGGGCTGCTCGCCCTCGGTCACTACC
TCTCCCTGCTCGGGTCGTCCTCGGAGAACGGCGTCCTCAAGGAGGAGAACGCCCAGCTCCGATCGCAGATCCTGCTGGTC
CAGGAGAAGGTCGCCCACATCTCGGCGACCCTCGACCGCGTCGAGCGCTTCGACGCGAAGCTCCGCACCGCGGTGACGCA
GCTCCAGGATCCGGAGCGGAACCTCGCCATCGGGCCGGTCGGCAACGCCGACGGCGAGCCGTCGATCCCCGGGCCCGCCC
CCGCCGCCGAGGCGAGCATCGCCGCGCTGCCCGGGAAGCTGGGCTCGCTCGAGACCGAGGCCTCGCGCCAGGAGCAGAGC
CTGCGCGAGCTGCAGGAGTACTTCGACGACCAGCGCTCGCTGCTCGCCTCCACGCCGTCGATCTGGCCGGCGCGCGGCTG
GGTGACCTCCGACTTCGGTACCCGCATCGACCCGTACACGGCCGAGCGGAAGATGCACCAGGGCCTCGACATCGCCACCC
CGCACGGCCAGCCCATCTACACGCCGTCGGACGGCACGGTGGTGTTCGCCGGCACCGAGGGCGCGTACGGCAAGGTGCTG
GTCCTCGACCACGGCTACGGCGTGAAGACCCGCTACGCCCACCTCTCCGAGGTCTTCGTCCGCCTGGGCGACCGCGTGAA
GCGCGGCGACAAGGTGGCCGCCGTCGGCAACACCGGCCGCTCCACCGGCCCGCACCTGCACTACGAGGTGCGCGTGAACG
GCATCCCGGAGAACCCGAGGAAGTTCATCCTGGAGTGA

Upstream 100 bases:

>100_bases
TGCCTCGGGGTCCCGTACCTCCGGGACTGGCGTTCATCCTGCGGCGTCGCGTCGCTAGCTTCTCGGGCGCATGCCTGGGG
ACCAACGGAGCGTGGATCGG

Downstream 100 bases:

>100_bases
TCCCGGCGGCCGGCGCTCGCGCGCCGCCGTGGTGAGCCCCGGGATGGCGCCGATGGCGAGCGCGTCGAGCCGCGAGCGGG
CCGCCGCCCGTGTCTCAGCG

Product: peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MAVPPKTQVFTVIVVSDHSQAIRKFRVPQKWLKKAAYGGGAVVLVGLLALGHYLSLLGSSSENGVLKEENAQLRSQILLV
QEKVAHISATLDRVERFDAKLRTAVTQLQDPERNLAIGPVGNADGEPSIPGPAPAAEASIAALPGKLGSLETEASRQEQS
LRELQEYFDDQRSLLASTPSIWPARGWVTSDFGTRIDPYTAERKMHQGLDIATPHGQPIYTPSDGTVVFAGTEGAYGKVL
VLDHGYGVKTRYAHLSEVFVRLGDRVKRGDKVAAVGNTGRSTGPHLHYEVRVNGIPENPRKFILE

Sequences:

>Translated_305_residues
MAVPPKTQVFTVIVVSDHSQAIRKFRVPQKWLKKAAYGGGAVVLVGLLALGHYLSLLGSSSENGVLKEENAQLRSQILLV
QEKVAHISATLDRVERFDAKLRTAVTQLQDPERNLAIGPVGNADGEPSIPGPAPAAEASIAALPGKLGSLETEASRQEQS
LRELQEYFDDQRSLLASTPSIWPARGWVTSDFGTRIDPYTAERKMHQGLDIATPHGQPIYTPSDGTVVFAGTEGAYGKVL
VLDHGYGVKTRYAHLSEVFVRLGDRVKRGDKVAAVGNTGRSTGPHLHYEVRVNGIPENPRKFILE
>Mature_304_residues
AVPPKTQVFTVIVVSDHSQAIRKFRVPQKWLKKAAYGGGAVVLVGLLALGHYLSLLGSSSENGVLKEENAQLRSQILLVQ
EKVAHISATLDRVERFDAKLRTAVTQLQDPERNLAIGPVGNADGEPSIPGPAPAAEASIAALPGKLGSLETEASRQEQSL
RELQEYFDDQRSLLASTPSIWPARGWVTSDFGTRIDPYTAERKMHQGLDIATPHGQPIYTPSDGTVVFAGTEGAYGKVLV
LDHGYGVKTRYAHLSEVFVRLGDRVKRGDKVAAVGNTGRSTGPHLHYEVRVNGIPENPRKFILE

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=113, Percent_Identity=46.9026548672566, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789099, Length=123, Percent_Identity=35.7723577235772, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87082174, Length=128, Percent_Identity=32.03125, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082297, Length=158, Percent_Identity=26.5822784810127, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 33086; Mature: 32955

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPPKTQVFTVIVVSDHSQAIRKFRVPQKWLKKAAYGGGAVVLVGLLALGHYLSLLGSS
CCCCCCCEEEEEEEECCCHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
SENGVLKEENAQLRSQILLVQEKVAHISATLDRVERFDAKLRTAVTQLQDPERNLAIGPV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
GNADGEPSIPGPAPAAEASIAALPGKLGSLETEASRQEQSLRELQEYFDDQRSLLASTPS
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IWPARGWVTSDFGTRIDPYTAERKMHQGLDIATPHGQPIYTPSDGTVVFAGTEGAYGKVL
CCCCCCCEECCCCCCCCCHHHHHHHHCCCCEECCCCCEEEECCCCEEEEEECCCCCEEEE
VLDHGYGVKTRYAHLSEVFVRLGDRVKRGDKVAAVGNTGRSTGPHLHYEVRVNGIPENPR
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCH
KFILE
HHCCC
>Mature Secondary Structure 
AVPPKTQVFTVIVVSDHSQAIRKFRVPQKWLKKAAYGGGAVVLVGLLALGHYLSLLGSS
CCCCCCEEEEEEEECCCHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
SENGVLKEENAQLRSQILLVQEKVAHISATLDRVERFDAKLRTAVTQLQDPERNLAIGPV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
GNADGEPSIPGPAPAAEASIAALPGKLGSLETEASRQEQSLRELQEYFDDQRSLLASTPS
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IWPARGWVTSDFGTRIDPYTAERKMHQGLDIATPHGQPIYTPSDGTVVFAGTEGAYGKVL
CCCCCCCEECCCCCCCCCHHHHHHHHCCCCEECCCCCEEEECCCCEEEEEECCCCCEEEE
VLDHGYGVKTRYAHLSEVFVRLGDRVKRGDKVAAVGNTGRSTGPHLHYEVRVNGIPENPR
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCH
KFILE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]