| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is prpC [H]
Identifier: 220915886
GI number: 220915886
Start: 865715
End: 866557
Strand: Direct
Name: prpC [H]
Synonym: A2cp1_0770
Alternate gene names: 220915886
Gene position: 865715-866557 (Clockwise)
Preceding gene: 220915885
Following gene: 220915887
Centisome position: 17.21
GC content: 70.82
Gene sequence:
>843_bases ATGGCAACCGCGTTGACCCCTCAGTCTGCGGAAAGGTACGCTCCGCGCGTGGCGGCCACGCCTGTCCTGACGATCGCTGC CCACGGCGTCACGGACGTCGGCCAGCGGCGCGATCACAACGAGGACGCGTTCCTGGTCGATCCCGCGCTGGGGCTGTACG TGGTCGCCGACGGCATGGGCGGCCACGCGGGCGGCGGCACGGCATCCCGGCTCGCGGTCGAGACCATCCAGGAGTCGATC CGCGCGGCGCGCGACGGCGCGCCGGAGGTGTTCGAGGGGGCGAACGGGGTCGAGGACAGCCGCCTCCCGGACCTGCTCCG CGACGCGGTCGAGGCGGCCTGCGCGCGGATCTTCCAGACGGCCCAGGACGCTCCCGAGCTCGCCGGGATGGGGACCACCG TCACCGCGGCGCTCATCGACGGCCGGGTGGCGTTCGTGGCGCACGTGGGCGACAGCCGCTGCTACCTGCTGCGCGAGGGG CGCATCTACCAGGTCTCCGAGGACCACTCGCTCGTCAACGAGCAGCTCAAGGCCGGCACCATCAGCGCCGACGAGGCGAA GCACAGCCGCTTCAAGAACATCATCACTCGATCGGTGGGGTTCGAGGCGCAGGTCCAGGTCGATCTCATGGGCCTCGAGC TCGAGGACGGCGACGGGCTCGTGATCTGCTGCGACGGCCTGTCCAACCTGGTGGACGACGACGAGATCCTCCAGATCGTG GACGAATGCCCCATCGACGCGTCGCCGGCGCGCCTGGTCGAGCTCGCGAACGATCGCGGCGGCGACGACAACATCACCGT GATCGTGATCCGGGCGGGCCGCGAGCCGATCCTGGCCGGCTGA
Upstream 100 bases:
>100_bases TGAGCCGCCCGCGCGGCCGACCGGGGGATCCTGGGACGCCGCGGGGTCGCACCGGGCCGTCGAGGGGTCACGAACGCGGA CCGCGGCGTTCGGCGAGACG
Downstream 100 bases:
>100_bases CGCCTGCCCGCCCGCTCGCGCAGTGCGGGTCCGGGCTGGGGTAAGGTGGGCAAAACCCTTTCTTGACAGGCAACTTCGGG CTCTGTTACCGGTCTGCCTC
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MATALTPQSAERYAPRVAATPVLTIAAHGVTDVGQRRDHNEDAFLVDPALGLYVVADGMGGHAGGGTASRLAVETIQESI RAARDGAPEVFEGANGVEDSRLPDLLRDAVEAACARIFQTAQDAPELAGMGTTVTAALIDGRVAFVAHVGDSRCYLLREG RIYQVSEDHSLVNEQLKAGTISADEAKHSRFKNIITRSVGFEAQVQVDLMGLELEDGDGLVICCDGLSNLVDDDEILQIV DECPIDASPARLVELANDRGGDDNITVIVIRAGREPILAG
Sequences:
>Translated_280_residues MATALTPQSAERYAPRVAATPVLTIAAHGVTDVGQRRDHNEDAFLVDPALGLYVVADGMGGHAGGGTASRLAVETIQESI RAARDGAPEVFEGANGVEDSRLPDLLRDAVEAACARIFQTAQDAPELAGMGTTVTAALIDGRVAFVAHVGDSRCYLLREG RIYQVSEDHSLVNEQLKAGTISADEAKHSRFKNIITRSVGFEAQVQVDLMGLELEDGDGLVICCDGLSNLVDDDEILQIV DECPIDASPARLVELANDRGGDDNITVIVIRAGREPILAG >Mature_279_residues ATALTPQSAERYAPRVAATPVLTIAAHGVTDVGQRRDHNEDAFLVDPALGLYVVADGMGGHAGGGTASRLAVETIQESIR AARDGAPEVFEGANGVEDSRLPDLLRDAVEAACARIFQTAQDAPELAGMGTTVTAALIDGRVAFVAHVGDSRCYLLREGR IYQVSEDHSLVNEQLKAGTISADEAKHSRFKNIITRSVGFEAQVQVDLMGLELEDGDGLVICCDGLSNLVDDDEILQIVD ECPIDASPARLVELANDRGGDDNITVIVIRAGREPILAG
Specific function: Protein phosphatase that dephosphorylates prkC and fusA (elongation factor G). PrpC and prkC are cotranscribed, which suggests that they form a functional couple in vivo, prpC's primary role being possibly to counter the action of prkC. May be involved in
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015655 - InterPro: IPR001932 - InterPro: IPR014045 [H]
Pfam domain/function: PF00481 PP2C [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 29583; Mature: 29452
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATALTPQSAERYAPRVAATPVLTIAAHGVTDVGQRRDHNEDAFLVDPALGLYVVADGMG CCCCCCCCCHHHHCCCHHCCCEEEEEECCCHHHHHCCCCCCCEEEECCCCEEEEEEECCC GHAGGGTASRLAVETIQESIRAARDGAPEVFEGANGVEDSRLPDLLRDAVEAACARIFQT CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AQDAPELAGMGTTVTAALIDGRVAFVAHVGDSRCYLLREGRIYQVSEDHSLVNEQLKAGT HHCCHHHHCCCCHHHHHHHCCCEEEEEEECCCEEEEEECCEEEEECCCHHHHHHHHHCCC ISADEAKHSRFKNIITRSVGFEAQVQVDLMGLELEDGDGLVICCDGLSNLVDDDEILQIV CCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEECCHHHHCCHHHHHHHH DECPIDASPARLVELANDRGGDDNITVIVIRAGREPILAG HHCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure ATALTPQSAERYAPRVAATPVLTIAAHGVTDVGQRRDHNEDAFLVDPALGLYVVADGMG CCCCCCCCHHHHCCCHHCCCEEEEEECCCHHHHHCCCCCCCEEEECCCCEEEEEEECCC GHAGGGTASRLAVETIQESIRAARDGAPEVFEGANGVEDSRLPDLLRDAVEAACARIFQT CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AQDAPELAGMGTTVTAALIDGRVAFVAHVGDSRCYLLREGRIYQVSEDHSLVNEQLKAGT HHCCHHHHCCCCHHHHHHHCCCEEEEEEECCCEEEEEECCEEEEECCCHHHHHHHHHCCC ISADEAKHSRFKNIITRSVGFEAQVQVDLMGLELEDGDGLVICCDGLSNLVDDDEILQIV CCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEECCHHHHCCHHHHHHHH DECPIDASPARLVELANDRGGDDNITVIVIRAGREPILAG HHCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]