| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220915875
Identifier: 220915875
GI number: 220915875
Start: 851592
End: 852335
Strand: Direct
Name: 220915875
Synonym: A2cp1_0759
Alternate gene names: NA
Gene position: 851592-852335 (Clockwise)
Preceding gene: 220915874
Following gene: 220915876
Centisome position: 16.93
GC content: 71.1
Gene sequence:
>744_bases TTGTCGTCGCTGCGTGAGAAGCTGAAGACGCTGGAGGAGTTGCAGCAGATCGACCTCGACTCGAACGAGGTCAGGGCTGA GCTGGAGACCCTCCCGGCGAAGCGCGCCGAGATCGACCAGCGGGTCGCCGAGGCCCGGAGGGCCTACGACGAGGAGAAGT CCCGCGTCGAGGGGAACGAGCGCGAGCGCCGGCAGCTCGAGTCGCTCCTCGCGATGGAGCGGGACAAGGTCAAGAAGTGG GAGGGCCGCCTGGGCGAGATCCGGACGCCCCGCGAGTACGCCGCGCTCTCCCGCGAGATCGACATCGCGAAGAAGACGAA CGACGGCCAGTCCGAGCAGATCAAGGCGCTGGTCGCGAGCGCCGGCGAGCTCCAGAAGACGCTCGAGGGCAAGGCCGACG CGCTGGCCGAGCGCGAGGAGGCGAACGAGGCGGAGCTGAAGGGCCTCGAGGAGCGGCAGGCGGCCGCCCAGCAGCGCCTG GCCGAGCTCGACGCCCGGCGCGCCGAGGCGGTGAAGCGCGTGGACCCCGGGCTGCTCTCGAAGTACGAGAACATCAAGCG GCGCCGGGCCGGCGTGGCGGTCGCGCAGGTGATCGGCATGACCTGCGACGGCTGCCACCGGCACATCCCGCCCCAGCTCG CCATCACCTTGCAGCGGGCGAACTCGATCGAGACCTGCCCGAACTGCCACCGCATCATCTACGCGGCCGAGGCGGTCAAC CCGCCGGCGCCGCCGCCGGCCTAG
Upstream 100 bases:
>100_bases GCTCAACGGTCAGAGCGCTCGGCTCATAACCGATGCGATCCAGGTTCGAATCCTGGTGGGCCCACTCGTCGCAACCAGCA GGGAGAACGGGAGAACGGCA
Downstream 100 bases:
>100_bases CCGTGGCCAAGGCCGTCCTCGCGGAGCTGCTCCGCTTCATCGCCGCCAACGAGGAGCTCCCGCGGACGCGCGCCCGGTAC CCGGGCTACGACCGCGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSSLREKLKTLEELQQIDLDSNEVRAELETLPAKRAEIDQRVAEARRAYDEEKSRVEGNERERRQLESLLAMERDKVKKW EGRLGEIRTPREYAALSREIDIAKKTNDGQSEQIKALVASAGELQKTLEGKADALAEREEANEAELKGLEERQAAAQQRL AELDARRAEAVKRVDPGLLSKYENIKRRRAGVAVAQVIGMTCDGCHRHIPPQLAITLQRANSIETCPNCHRIIYAAEAVN PPAPPPA
Sequences:
>Translated_247_residues MSSLREKLKTLEELQQIDLDSNEVRAELETLPAKRAEIDQRVAEARRAYDEEKSRVEGNERERRQLESLLAMERDKVKKW EGRLGEIRTPREYAALSREIDIAKKTNDGQSEQIKALVASAGELQKTLEGKADALAEREEANEAELKGLEERQAAAQQRL AELDARRAEAVKRVDPGLLSKYENIKRRRAGVAVAQVIGMTCDGCHRHIPPQLAITLQRANSIETCPNCHRIIYAAEAVN PPAPPPA >Mature_246_residues SSLREKLKTLEELQQIDLDSNEVRAELETLPAKRAEIDQRVAEARRAYDEEKSRVEGNERERRQLESLLAMERDKVKKWE GRLGEIRTPREYAALSREIDIAKKTNDGQSEQIKALVASAGELQKTLEGKADALAEREEANEAELKGLEERQAAAQQRLA ELDARRAEAVKRVDPGLLSKYENIKRRRAGVAVAQVIGMTCDGCHRHIPPQLAITLQRANSIETCPNCHRIIYAAEAVNP PAPPPA
Specific function: Unknown
COG id: COG1579
COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27718; Mature: 27586
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLREKLKTLEELQQIDLDSNEVRAELETLPAKRAEIDQRVAEARRAYDEEKSRVEGNE CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH RERRQLESLLAMERDKVKKWEGRLGEIRTPREYAALSREIDIAKKTNDGQSEQIKALVAS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AGELQKTLEGKADALAEREEANEAELKGLEERQAAAQQRLAELDARRAEAVKRVDPGLLS HHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH KYENIKRRRAGVAVAQVIGMTCDGCHRHIPPQLAITLQRANSIETCPNCHRIIYAAEAVN HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC PPAPPPA CCCCCCC >Mature Secondary Structure SSLREKLKTLEELQQIDLDSNEVRAELETLPAKRAEIDQRVAEARRAYDEEKSRVEGNE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH RERRQLESLLAMERDKVKKWEGRLGEIRTPREYAALSREIDIAKKTNDGQSEQIKALVAS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AGELQKTLEGKADALAEREEANEAELKGLEERQAAAQQRLAELDARRAEAVKRVDPGLLS HHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH KYENIKRRRAGVAVAQVIGMTCDGCHRHIPPQLAITLQRANSIETCPNCHRIIYAAEAVN HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC PPAPPPA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA