| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220915606
Identifier: 220915606
GI number: 220915606
Start: 559151
End: 559819
Strand: Direct
Name: 220915606
Synonym: A2cp1_0487
Alternate gene names: NA
Gene position: 559151-559819 (Clockwise)
Preceding gene: 220915605
Following gene: 220915608
Centisome position: 11.12
GC content: 66.52
Gene sequence:
>669_bases ATGGCCCGCGTCCCCAGGTTCGCGCTCGTCGAGCGCGATTCGTCAAATCACTGCACCTGGCGGGCGCACGATCTCGAGTT CGTCTTCGAGGAGCCGGGCGCGCGCGACGAGTTCCTGGAACTCCTGGGTCGGTACAAGGAGCGCTACGGCGTCGAGATCC GGTCGTACTGCCTGATGGGCACCCACCCGCACGTCACCTGCACGTGCCGCCAGGAGCAGGCGCAGTTCAGCCGCTTCTGG CAGGTCGTGAACGGGCAGTTCGCGCGCTGGTACAACAAGGTGAGGAACCGACGCGGTCAGGTCGTGATGGAGCGGATGCG CACGCCACGCATCCAGGAGGGCGGCGCGCATCAGCTCACCGTGATGCGGTACGGCGACCTGAACCCGGTGCGCGCCGGGC TCGTGAAGAGTCCAAAGGACTGGAAGTGGTCGAGCTACCGGCACTATGCGTTCGGCGAGCCGAACCCACTCATCACCGAC GCGCCGGAGTACCTTGCGCTCGGGAAGACGGCTCCGGAGCGCCGAAAGGCTTACCAGACGCTGTTCGCGTTGCCGTTATC CGAGTCGCTTCGCACGCGGCGCGTAGAGCTCGTCAGCTTCCCTTTCGTCGGCGACGCGAGCTGGGTGAGGCGCCGACTCG AGCTCGCAGGGCTTTCGCCACCGGACTGA
Upstream 100 bases:
>100_bases CGCGCCGCGACCGCAGGTCCGTCCTGCGGACGGATGGACGCGAGGTTCGCGAGGAGTTCGGCGGTCGATCGTTGGTATCG GACTTGCGTGAAGGCCCAGG
Downstream 100 bases:
>100_bases CGTCGCGACGCGGGGCCGGGCGCCGCACGCGTGAGGTTCCACGAAACGTGGAACCCGGGCACCGCTGTCGGTTCGCTCCC GTCATCCGCCACGCGACGCG
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase And Inactivated Derivatives Protein; Transposase Or Inactivated Derivative
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MARVPRFALVERDSSNHCTWRAHDLEFVFEEPGARDEFLELLGRYKERYGVEIRSYCLMGTHPHVTCTCRQEQAQFSRFW QVVNGQFARWYNKVRNRRGQVVMERMRTPRIQEGGAHQLTVMRYGDLNPVRAGLVKSPKDWKWSSYRHYAFGEPNPLITD APEYLALGKTAPERRKAYQTLFALPLSESLRTRRVELVSFPFVGDASWVRRRLELAGLSPPD
Sequences:
>Translated_222_residues MARVPRFALVERDSSNHCTWRAHDLEFVFEEPGARDEFLELLGRYKERYGVEIRSYCLMGTHPHVTCTCRQEQAQFSRFW QVVNGQFARWYNKVRNRRGQVVMERMRTPRIQEGGAHQLTVMRYGDLNPVRAGLVKSPKDWKWSSYRHYAFGEPNPLITD APEYLALGKTAPERRKAYQTLFALPLSESLRTRRVELVSFPFVGDASWVRRRLELAGLSPPD >Mature_221_residues ARVPRFALVERDSSNHCTWRAHDLEFVFEEPGARDEFLELLGRYKERYGVEIRSYCLMGTHPHVTCTCRQEQAQFSRFWQ VVNGQFARWYNKVRNRRGQVVMERMRTPRIQEGGAHQLTVMRYGDLNPVRAGLVKSPKDWKWSSYRHYAFGEPNPLITDA PEYLALGKTAPERRKAYQTLFALPLSESLRTRRVELVSFPFVGDASWVRRRLELAGLSPPD
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25978; Mature: 25847
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVPRFALVERDSSNHCTWRAHDLEFVFEEPGARDEFLELLGRYKERYGVEIRSYCLMG CCCCCCEEEEECCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEHEEEEC THPHVTCTCRQEQAQFSRFWQVVNGQFARWYNKVRNRRGQVVMERMRTPRIQEGGAHQLT CCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEE VMRYGDLNPVRAGLVKSPKDWKWSSYRHYAFGEPNPLITDAPEYLALGKTAPERRKAYQT EEEECCCCHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHH LFALPLSESLRTRRVELVSFPFVGDASWVRRRLELAGLSPPD HHHCCCHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure ARVPRFALVERDSSNHCTWRAHDLEFVFEEPGARDEFLELLGRYKERYGVEIRSYCLMG CCCCCEEEEECCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEHEEEEC THPHVTCTCRQEQAQFSRFWQVVNGQFARWYNKVRNRRGQVVMERMRTPRIQEGGAHQLT CCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEE VMRYGDLNPVRAGLVKSPKDWKWSSYRHYAFGEPNPLITDAPEYLALGKTAPERRKAYQT EEEECCCCHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHH LFALPLSESLRTRRVELVSFPFVGDASWVRRRLELAGLSPPD HHHCCCHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA