Definition Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession NC_011891
Length 5,029,329

Click here to switch to the map view.

The map label for this gene is 220915430

Identifier: 220915430

GI number: 220915430

Start: 343616

End: 344680

Strand: Direct

Name: 220915430

Synonym: A2cp1_0309

Alternate gene names: NA

Gene position: 343616-344680 (Clockwise)

Preceding gene: 220915429

Following gene: 220915431

Centisome position: 6.83

GC content: 83.19

Gene sequence:

>1065_bases
ATGCGCCGCTCCCTCGCCGCCGCCGCGCCCGCCCTCGTCGTCGCGACCGCGCTGGTCGCCGCGGGCGGGCTCGCCGCGTG
CCGCCGCGCCGCCCCGGCGCTCCCCGAGGTCCGCCTGCACGCCTCGCCCGACCTGCCGGCCGAGGTGGTGCGCGACCTCG
CCGCCCGCTTCGCGGTGGCGCGGGTGGTGCTCGTGCCCCGCGCCGAGGAGGCGGAGGTGGCCTGGGCCTCGGATCCCGCG
GCCCTCCTCGCGCTCGCGCCCCGGCTCGTGCCCGGCAGCGCCGCGCCGGAGCCGGCCACGGCGCAGTTCGCCGACCCTCA
GGGCCGCTTCGCCCCGGTGGCGGCGCGCGCGCGGGTGCTGCTCGTCGCGCGCGACGCGCGGCTCCCGGTGGACCCCACCA
ACCTGCGCGACCTCGCCGATCCGCGCCTGCGGGGCCGCGTCGCGCTCGCGCACCCGGCGCGCGGCGCCGGCCCGGCGACC
TGCGCGGCCCTCTCGCTCGTGTACGGCGAGGCGAGCCTGGGGCGCTTCCTGCGGCTGGTCGCGGCGAACGCGCCGGTGGT
GGTGGGCTCGGACGCGGAGGTGCGCGCGGCGGTGGCGGCGGGGCGCGCCGCGGTGGGCCTCGCGGGCTCGGTGGACGGCG
CCGCCGGCGCGGCGAGCGCGGCCGCGCTGCGCGTCGTCTACCCGGACCAGGCCGGGCGCGGCGCGGTGGTGCTGCCCACG
GCGGCGGCGGCGCTCGCGCCGGCGGCGGGCGGCGCACCCTCGCCCGCGGCGGTGCGGCTGGTGGCCTGGCTGGCCGGCGC
GGACGCGGAGCGGATCCTGGTCGCGCGCGCGCCCGGGCTCCTGCCGCTGCGCCCGGAGGTCCCCGTGCCGGTCGGCGTCG
AGCCCGCCGGCAACCTGCGCGCGCTCCCGCTCGACTGGGATGGGCTCGCCGCGGAGGCTGCCCGGCTCGCGCCGCTGCTC
GAGCGCTGGCCGGACGCGTTCGCTGGCGCGGGGACCGGACGCGGGGCGGCGAGGGAAGCGGCGGCTCCCGAGGGACGGCC
GGGGCGCCTCGAACACGCACCGTGA

Upstream 100 bases:

>100_bases
GCCGCCGAGGCGCTCACGCGGGCGCGCGCCGCGGGCGGCGACCGGGCCGAGCCGGCGGAGCCGCCGCGCCGCCGCGACCG
CATCGTCTTGGGGTGACCGC

Downstream 100 bases:

>100_bases
ATGCGCTCGCCGCGTCTGCCCGGACCCACGGTCGCGGTCGCCCCCGGGTCGCCCGCACACCCTTCACCGAGCGGCTGCGG
CGACGGTTCACGCCCCATTA

Product: Fe3+ ABC transporter periplasmic ligand binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRRSLAAAAPALVVATALVAAGGLAACRRAAPALPEVRLHASPDLPAEVVRDLAARFAVARVVLVPRAEEAEVAWASDPA
ALLALAPRLVPGSAAPEPATAQFADPQGRFAPVAARARVLLVARDARLPVDPTNLRDLADPRLRGRVALAHPARGAGPAT
CAALSLVYGEASLGRFLRLVAANAPVVVGSDAEVRAAVAAGRAAVGLAGSVDGAAGAASAAALRVVYPDQAGRGAVVLPT
AAAALAPAAGGAPSPAAVRLVAWLAGADAERILVARAPGLLPLRPEVPVPVGVEPAGNLRALPLDWDGLAAEAARLAPLL
ERWPDAFAGAGTGRGAAREAAAPEGRPGRLEHAP

Sequences:

>Translated_354_residues
MRRSLAAAAPALVVATALVAAGGLAACRRAAPALPEVRLHASPDLPAEVVRDLAARFAVARVVLVPRAEEAEVAWASDPA
ALLALAPRLVPGSAAPEPATAQFADPQGRFAPVAARARVLLVARDARLPVDPTNLRDLADPRLRGRVALAHPARGAGPAT
CAALSLVYGEASLGRFLRLVAANAPVVVGSDAEVRAAVAAGRAAVGLAGSVDGAAGAASAAALRVVYPDQAGRGAVVLPT
AAAALAPAAGGAPSPAAVRLVAWLAGADAERILVARAPGLLPLRPEVPVPVGVEPAGNLRALPLDWDGLAAEAARLAPLL
ERWPDAFAGAGTGRGAAREAAAPEGRPGRLEHAP
>Mature_354_residues
MRRSLAAAAPALVVATALVAAGGLAACRRAAPALPEVRLHASPDLPAEVVRDLAARFAVARVVLVPRAEEAEVAWASDPA
ALLALAPRLVPGSAAPEPATAQFADPQGRFAPVAARARVLLVARDARLPVDPTNLRDLADPRLRGRVALAHPARGAGPAT
CAALSLVYGEASLGRFLRLVAANAPVVVGSDAEVRAAVAAGRAAVGLAGSVDGAAGAASAAALRVVYPDQAGRGAVVLPT
AAAALAPAAGGAPSPAAVRLVAWLAGADAERILVARAPGLLPLRPEVPVPVGVEPAGNLRALPLDWDGLAAEAARLAPLL
ERWPDAFAGAGTGRGAAREAAAPEGRPGRLEHAP

Specific function: Unknown

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35312; Mature: 35312

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSLAAAAPALVVATALVAAGGLAACRRAAPALPEVRLHASPDLPAEVVRDLAARFAVA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
RVVLVPRAEEAEVAWASDPAALLALAPRLVPGSAAPEPATAQFADPQGRFAPVAARARVL
HHEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHCEEEE
LVARDARLPVDPTNLRDLADPRLRGRVALAHPARGAGPATCAALSLVYGEASLGRFLRLV
EEEECCCCCCCCCCCHHHCCCHHHCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
AANAPVVVGSDAEVRAAVAAGRAAVGLAGSVDGAAGAASAAALRVVYPDQAGRGAVVLPT
HCCCCEEECCCCHHHHHHHHCCHHEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEECC
AAAALAPAAGGAPSPAAVRLVAWLAGADAERILVARAPGLLPLRPEVPVPVGVEPAGNLR
HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
ALPLDWDGLAAEAARLAPLLERWPDAFAGAGTGRGAAREAAAPEGRPGRLEHAP
EECCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRSLAAAAPALVVATALVAAGGLAACRRAAPALPEVRLHASPDLPAEVVRDLAARFAVA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
RVVLVPRAEEAEVAWASDPAALLALAPRLVPGSAAPEPATAQFADPQGRFAPVAARARVL
HHEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHCEEEE
LVARDARLPVDPTNLRDLADPRLRGRVALAHPARGAGPATCAALSLVYGEASLGRFLRLV
EEEECCCCCCCCCCCHHHCCCHHHCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
AANAPVVVGSDAEVRAAVAAGRAAVGLAGSVDGAAGAASAAALRVVYPDQAGRGAVVLPT
HCCCCEEECCCCHHHHHHHHCCHHEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEECC
AAAALAPAAGGAPSPAAVRLVAWLAGADAERILVARAPGLLPLRPEVPVPVGVEPAGNLR
HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
ALPLDWDGLAAEAARLAPLLERWPDAFAGAGTGRGAAREAAAPEGRPGRLEHAP
EECCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA