| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220915430
Identifier: 220915430
GI number: 220915430
Start: 343616
End: 344680
Strand: Direct
Name: 220915430
Synonym: A2cp1_0309
Alternate gene names: NA
Gene position: 343616-344680 (Clockwise)
Preceding gene: 220915429
Following gene: 220915431
Centisome position: 6.83
GC content: 83.19
Gene sequence:
>1065_bases ATGCGCCGCTCCCTCGCCGCCGCCGCGCCCGCCCTCGTCGTCGCGACCGCGCTGGTCGCCGCGGGCGGGCTCGCCGCGTG CCGCCGCGCCGCCCCGGCGCTCCCCGAGGTCCGCCTGCACGCCTCGCCCGACCTGCCGGCCGAGGTGGTGCGCGACCTCG CCGCCCGCTTCGCGGTGGCGCGGGTGGTGCTCGTGCCCCGCGCCGAGGAGGCGGAGGTGGCCTGGGCCTCGGATCCCGCG GCCCTCCTCGCGCTCGCGCCCCGGCTCGTGCCCGGCAGCGCCGCGCCGGAGCCGGCCACGGCGCAGTTCGCCGACCCTCA GGGCCGCTTCGCCCCGGTGGCGGCGCGCGCGCGGGTGCTGCTCGTCGCGCGCGACGCGCGGCTCCCGGTGGACCCCACCA ACCTGCGCGACCTCGCCGATCCGCGCCTGCGGGGCCGCGTCGCGCTCGCGCACCCGGCGCGCGGCGCCGGCCCGGCGACC TGCGCGGCCCTCTCGCTCGTGTACGGCGAGGCGAGCCTGGGGCGCTTCCTGCGGCTGGTCGCGGCGAACGCGCCGGTGGT GGTGGGCTCGGACGCGGAGGTGCGCGCGGCGGTGGCGGCGGGGCGCGCCGCGGTGGGCCTCGCGGGCTCGGTGGACGGCG CCGCCGGCGCGGCGAGCGCGGCCGCGCTGCGCGTCGTCTACCCGGACCAGGCCGGGCGCGGCGCGGTGGTGCTGCCCACG GCGGCGGCGGCGCTCGCGCCGGCGGCGGGCGGCGCACCCTCGCCCGCGGCGGTGCGGCTGGTGGCCTGGCTGGCCGGCGC GGACGCGGAGCGGATCCTGGTCGCGCGCGCGCCCGGGCTCCTGCCGCTGCGCCCGGAGGTCCCCGTGCCGGTCGGCGTCG AGCCCGCCGGCAACCTGCGCGCGCTCCCGCTCGACTGGGATGGGCTCGCCGCGGAGGCTGCCCGGCTCGCGCCGCTGCTC GAGCGCTGGCCGGACGCGTTCGCTGGCGCGGGGACCGGACGCGGGGCGGCGAGGGAAGCGGCGGCTCCCGAGGGACGGCC GGGGCGCCTCGAACACGCACCGTGA
Upstream 100 bases:
>100_bases GCCGCCGAGGCGCTCACGCGGGCGCGCGCCGCGGGCGGCGACCGGGCCGAGCCGGCGGAGCCGCCGCGCCGCCGCGACCG CATCGTCTTGGGGTGACCGC
Downstream 100 bases:
>100_bases ATGCGCTCGCCGCGTCTGCCCGGACCCACGGTCGCGGTCGCCCCCGGGTCGCCCGCACACCCTTCACCGAGCGGCTGCGG CGACGGTTCACGCCCCATTA
Product: Fe3+ ABC transporter periplasmic ligand binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRRSLAAAAPALVVATALVAAGGLAACRRAAPALPEVRLHASPDLPAEVVRDLAARFAVARVVLVPRAEEAEVAWASDPA ALLALAPRLVPGSAAPEPATAQFADPQGRFAPVAARARVLLVARDARLPVDPTNLRDLADPRLRGRVALAHPARGAGPAT CAALSLVYGEASLGRFLRLVAANAPVVVGSDAEVRAAVAAGRAAVGLAGSVDGAAGAASAAALRVVYPDQAGRGAVVLPT AAAALAPAAGGAPSPAAVRLVAWLAGADAERILVARAPGLLPLRPEVPVPVGVEPAGNLRALPLDWDGLAAEAARLAPLL ERWPDAFAGAGTGRGAAREAAAPEGRPGRLEHAP
Sequences:
>Translated_354_residues MRRSLAAAAPALVVATALVAAGGLAACRRAAPALPEVRLHASPDLPAEVVRDLAARFAVARVVLVPRAEEAEVAWASDPA ALLALAPRLVPGSAAPEPATAQFADPQGRFAPVAARARVLLVARDARLPVDPTNLRDLADPRLRGRVALAHPARGAGPAT CAALSLVYGEASLGRFLRLVAANAPVVVGSDAEVRAAVAAGRAAVGLAGSVDGAAGAASAAALRVVYPDQAGRGAVVLPT AAAALAPAAGGAPSPAAVRLVAWLAGADAERILVARAPGLLPLRPEVPVPVGVEPAGNLRALPLDWDGLAAEAARLAPLL ERWPDAFAGAGTGRGAAREAAAPEGRPGRLEHAP >Mature_354_residues MRRSLAAAAPALVVATALVAAGGLAACRRAAPALPEVRLHASPDLPAEVVRDLAARFAVARVVLVPRAEEAEVAWASDPA ALLALAPRLVPGSAAPEPATAQFADPQGRFAPVAARARVLLVARDARLPVDPTNLRDLADPRLRGRVALAHPARGAGPAT CAALSLVYGEASLGRFLRLVAANAPVVVGSDAEVRAAVAAGRAAVGLAGSVDGAAGAASAAALRVVYPDQAGRGAVVLPT AAAALAPAAGGAPSPAAVRLVAWLAGADAERILVARAPGLLPLRPEVPVPVGVEPAGNLRALPLDWDGLAAEAARLAPLL ERWPDAFAGAGTGRGAAREAAAPEGRPGRLEHAP
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35312; Mature: 35312
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSLAAAAPALVVATALVAAGGLAACRRAAPALPEVRLHASPDLPAEVVRDLAARFAVA CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHH RVVLVPRAEEAEVAWASDPAALLALAPRLVPGSAAPEPATAQFADPQGRFAPVAARARVL HHEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHCEEEE LVARDARLPVDPTNLRDLADPRLRGRVALAHPARGAGPATCAALSLVYGEASLGRFLRLV EEEECCCCCCCCCCCHHHCCCHHHCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHH AANAPVVVGSDAEVRAAVAAGRAAVGLAGSVDGAAGAASAAALRVVYPDQAGRGAVVLPT HCCCCEEECCCCHHHHHHHHCCHHEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEECC AAAALAPAAGGAPSPAAVRLVAWLAGADAERILVARAPGLLPLRPEVPVPVGVEPAGNLR HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEE ALPLDWDGLAAEAARLAPLLERWPDAFAGAGTGRGAAREAAAPEGRPGRLEHAP EECCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRRSLAAAAPALVVATALVAAGGLAACRRAAPALPEVRLHASPDLPAEVVRDLAARFAVA CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHH RVVLVPRAEEAEVAWASDPAALLALAPRLVPGSAAPEPATAQFADPQGRFAPVAARARVL HHEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHCEEEE LVARDARLPVDPTNLRDLADPRLRGRVALAHPARGAGPATCAALSLVYGEASLGRFLRLV EEEECCCCCCCCCCCHHHCCCHHHCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHH AANAPVVVGSDAEVRAAVAAGRAAVGLAGSVDGAAGAASAAALRVVYPDQAGRGAVVLPT HCCCCEEECCCCHHHHHHHHCCHHEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEECC AAAALAPAAGGAPSPAAVRLVAWLAGADAERILVARAPGLLPLRPEVPVPVGVEPAGNLR HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEE ALPLDWDGLAAEAARLAPLLERWPDAFAGAGTGRGAAREAAAPEGRPGRLEHAP EECCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA