Click here to switch to the map view.

The map label for this gene is yddV [C]

Identifier: 220915429

GI number: 220915429

Start: 342706

End: 343611

Strand: Direct

Name: yddV [C]

Synonym: A2cp1_0308

Alternate gene names: 220915429

Gene position: 342706-343611 (Clockwise)

Preceding gene: 220915425

Following gene: 220915430

Centisome position: 6.81

GC content: 81.68

Gene sequence:

>906_bases
GTGCCGCGCCGCATCCTGGTCGCCGAGGCCTCCGCGCCGCTCCTCGCGCCGCTGCGCCGGCCGCTCCGCGCGGCCGGCGT
GGAGCTGGACGCGATCTCGCCCGCGGCGGCGTCGGGGCGGCTCGGCCCGGCGTCGCACGTGGCCGCCATCGTGCCCGGCG
GTGCGGGCGGCGCCGAGGCGGTGCGCGCGGTCCGGGCGGCCGATCCGCTGCTGCCGGTCATCGCGCTGTTCGCCGACGAG
GCCGAGGCCGCCGCGGCGGCCCAGGGCGAGGCGCTCGGCGCCGACGGCGCGCTGGTCGCGCCGGTGGGGCCGGCGGCGGT
GGTGGGGGCGTGCCGGCTGGCGGAGCGGCTCCGGGCGGCCACCGCCCGGGCGGTGGAGGCGGACGCGCGCCGCCTCGCGG
CGGAGGCCCCGCGCCACGCGGCCGACCTCGAGTTCCTGAAGCGCCTCCTGCCGCTCGAGGTGAAGCGCTCGCGCCGGTAC
GGCTACCCGGTGTCGGTGGCGCTCGTGGCGGTGGACCGGTTCGCCGAGGTGGCCGGGCGGCTCGGCCCGCACGGCCGCGC
CGCGCTCATGGCCGAGGTGCTCGGGCTGCTGGCCGCGTCGGTGCGCGACATCGACCTCGCGGCGCCGTTCACCGGCGAGC
GGTTCGTGGTGCTCATGCCGCACACGCGCGCCGAGGGCGCGCTGCAGGTGGCCCGGCGGCTCTGCGCGCGCATCCGCGAG
CGCGGCGCGGGCGAGGGGATCACCGTCAGCGCCGGCGTGGCCGGGCACGACGGCGACGGGACGGTGTCGTTCGGCGGGCT
GGTGAAGCGCGCCGCCGAGGCGCTCACGCGGGCGCGCGCCGCGGGCGGCGACCGGGCCGAGCCGGCGGAGCCGCCGCGCC
GCCGCGACCGCATCGTCTTGGGGTGA

Upstream 100 bases:

>100_bases
GGCGGCGTTGCCGGCGAAGTCCCCCACCGTCGTGTTCACCTGCGCGAGCGCGATGCGTCCGGAACGGGCCATGGGAGAGG
ATGCTACATTAGGAGCCATC

Downstream 100 bases:

>100_bases
CCGCATGCGCCGCTCCCTCGCCGCCGCCGCGCCCGCCCTCGTCGTCGCGACCGCGCTGGTCGCCGCGGGCGGGCTCGCCG
CGTGCCGCCGCGCCGCCCCG

Product: diguanylate cyclase

Products: NA

Alternate protein names: Response Regulator; Response Regulator Receiver Modulated Diguanylate Cyclase; Diguanylate Cyclase; Response Regulator Receiver Protein

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MPRRILVAEASAPLLAPLRRPLRAAGVELDAISPAAASGRLGPASHVAAIVPGGAGGAEAVRAVRAADPLLPVIALFADE
AEAAAAAQGEALGADGALVAPVGPAAVVGACRLAERLRAATARAVEADARRLAAEAPRHAADLEFLKRLLPLEVKRSRRY
GYPVSVALVAVDRFAEVAGRLGPHGRAALMAEVLGLLAASVRDIDLAAPFTGERFVVLMPHTRAEGALQVARRLCARIRE
RGAGEGITVSAGVAGHDGDGTVSFGGLVKRAAEALTRARAAGGDRAEPAEPPRRRDRIVLG

Sequences:

>Translated_301_residues
MPRRILVAEASAPLLAPLRRPLRAAGVELDAISPAAASGRLGPASHVAAIVPGGAGGAEAVRAVRAADPLLPVIALFADE
AEAAAAAQGEALGADGALVAPVGPAAVVGACRLAERLRAATARAVEADARRLAAEAPRHAADLEFLKRLLPLEVKRSRRY
GYPVSVALVAVDRFAEVAGRLGPHGRAALMAEVLGLLAASVRDIDLAAPFTGERFVVLMPHTRAEGALQVARRLCARIRE
RGAGEGITVSAGVAGHDGDGTVSFGGLVKRAAEALTRARAAGGDRAEPAEPPRRRDRIVLG
>Mature_300_residues
PRRILVAEASAPLLAPLRRPLRAAGVELDAISPAAASGRLGPASHVAAIVPGGAGGAEAVRAVRAADPLLPVIALFADEA
EAAAAAQGEALGADGALVAPVGPAAVVGACRLAERLRAATARAVEADARRLAAEAPRHAADLEFLKRLLPLEVKRSRRYG
YPVSVALVAVDRFAEVAGRLGPHGRAALMAEVLGLLAASVRDIDLAAPFTGERFVVLMPHTRAEGALQVARRLCARIRER
GAGEGITVSAGVAGHDGDGTVSFGGLVKRAAEALTRARAAGGDRAEPAEPPRRRDRIVLG

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30802; Mature: 30671

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRILVAEASAPLLAPLRRPLRAAGVELDAISPAAASGRLGPASHVAAIVPGGAGGAEA
CCCEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHEEEEECCCCCHHHH
VRAVRAADPLLPVIALFADEAEAAAAAQGEALGADGALVAPVGPAAVVGACRLAERLRAA
HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH
TARAVEADARRLAAEAPRHAADLEFLKRLLPLEVKRSRRYGYPVSVALVAVDRFAEVAGR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
LGPHGRAALMAEVLGLLAASVRDIDLAAPFTGERFVVLMPHTRAEGALQVARRLCARIRE
CCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
RGAGEGITVSAGVAGHDGDGTVSFGGLVKRAAEALTRARAAGGDRAEPAEPPRRRDRIVL
CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCC
G
C
>Mature Secondary Structure 
PRRILVAEASAPLLAPLRRPLRAAGVELDAISPAAASGRLGPASHVAAIVPGGAGGAEA
CCEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHEEEEECCCCCHHHH
VRAVRAADPLLPVIALFADEAEAAAAAQGEALGADGALVAPVGPAAVVGACRLAERLRAA
HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH
TARAVEADARRLAAEAPRHAADLEFLKRLLPLEVKRSRRYGYPVSVALVAVDRFAEVAGR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
LGPHGRAALMAEVLGLLAASVRDIDLAAPFTGERFVVLMPHTRAEGALQVARRLCARIRE
CCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
RGAGEGITVSAGVAGHDGDGTVSFGGLVKRAAEALTRARAAGGDRAEPAEPPRRRDRIVL
CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA