| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220915355
Identifier: 220915355
GI number: 220915355
Start: 248863
End: 249642
Strand: Direct
Name: 220915355
Synonym: A2cp1_0234
Alternate gene names: NA
Gene position: 248863-249642 (Clockwise)
Preceding gene: 220915353
Following gene: 220915356
Centisome position: 4.95
GC content: 74.36
Gene sequence:
>780_bases ATGTCGCGCACGCGGGTCGCGGTCCTCTCGACCGCCTTCGCGGTGGTGGCCGCGGGGGTGTTCGGGCTCGGGTTCCTGCG CGGCGCCGCCGAGGCGTCCGCCGCGCCCGCGCCGCCGCCGCTCTCCAGCGAGTACCCGGGCGGCGCGCCCATCGACGCGG CGCGCATCCAGACCGGCCGGCTCACCTTCGAGCGGATGCCGGCCGAGGTCTCGGGCGCGCTCGAGCTCCACTCCGCGGAG ATCGTGAAGCAGGCCGAGGTGCTCGCCACCAAGCAGGCCCGCATCACCGGCACCTGCGCGCCCGGCTCCGCCATCCGCGT GGTCGGCCAGGACGGCACGGTGGTGTGCCAGCGCTTCCCCCGCGGCGTCGTCTCGGTGTCCTCGCTCGCCGGCCTCCCGC GCGTCTCCACCACCGCCACCACCCAGCTCAGCGTGCCTGGCGGCGTGGGGCGCTACCAGTCCGCGGGGGAGGACGACTTC CTGGTGGTCCCGGTGGACCTGCCCGACGGCGCGGTGGTGACGGGCTTCTCGTTCGTGTTCTGGGACAGCGACGCCAGGAT CGACGGCGCCGCGTACCTGTACCGCTCCGACGACACCGCCATGGCTGCGCTCGTGACGAAGGAGGCCGCCGACGAGGTGC GGGTGGTGTCCACCCAGGACGTCGCCGCGCAGAAGGTGGACAACGCCGCCTTCGCGTACTTCGTCTACATGCAGCTCTCG GCCGCGGCCGGGCCGCGGCTCGTGCCCATCGCCGCGTCGGTGGCCTACAAGCTGCCGTGA
Upstream 100 bases:
>100_bases CGGCGCGGCCGGGCCGCGTCCCGCGGTCCCCGGATTTGAAGCCCGCCGCTCCCTCGCGGTACAAGCGGACGGTCGATCCT TCACGCAGGGGGGCGTCACC
Downstream 100 bases:
>100_bases GGCGGCGCGCCGGATCGCGCCGCCGCGCGATCCCCGCCGCGATCGACGCGCGGTTTGCGTCTACAATGCCGCTCCCCATG TCCCGAAGCGCCCTCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSRTRVAVLSTAFAVVAAGVFGLGFLRGAAEASAAPAPPPLSSEYPGGAPIDAARIQTGRLTFERMPAEVSGALELHSAE IVKQAEVLATKQARITGTCAPGSAIRVVGQDGTVVCQRFPRGVVSVSSLAGLPRVSTTATTQLSVPGGVGRYQSAGEDDF LVVPVDLPDGAVVTGFSFVFWDSDARIDGAAYLYRSDDTAMAALVTKEAADEVRVVSTQDVAAQKVDNAAFAYFVYMQLS AAAGPRLVPIAASVAYKLP
Sequences:
>Translated_259_residues MSRTRVAVLSTAFAVVAAGVFGLGFLRGAAEASAAPAPPPLSSEYPGGAPIDAARIQTGRLTFERMPAEVSGALELHSAE IVKQAEVLATKQARITGTCAPGSAIRVVGQDGTVVCQRFPRGVVSVSSLAGLPRVSTTATTQLSVPGGVGRYQSAGEDDF LVVPVDLPDGAVVTGFSFVFWDSDARIDGAAYLYRSDDTAMAALVTKEAADEVRVVSTQDVAAQKVDNAAFAYFVYMQLS AAAGPRLVPIAASVAYKLP >Mature_258_residues SRTRVAVLSTAFAVVAAGVFGLGFLRGAAEASAAPAPPPLSSEYPGGAPIDAARIQTGRLTFERMPAEVSGALELHSAEI VKQAEVLATKQARITGTCAPGSAIRVVGQDGTVVCQRFPRGVVSVSSLAGLPRVSTTATTQLSVPGGVGRYQSAGEDDFL VVPVDLPDGAVVTGFSFVFWDSDARIDGAAYLYRSDDTAMAALVTKEAADEVRVVSTQDVAAQKVDNAAFAYFVYMQLSA AAGPRLVPIAASVAYKLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26739; Mature: 26607
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTRVAVLSTAFAVVAAGVFGLGFLRGAAEASAAPAPPPLSSEYPGGAPIDAARIQTGR CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECC LTFERMPAEVSGALELHSAEIVKQAEVLATKQARITGTCAPGSAIRVVGQDGTVVCQRFP EEHHHCCCHHHCCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCEEEECCC RGVVSVSSLAGLPRVSTTATTQLSVPGGVGRYQSAGEDDFLVVPVDLPDGAVVTGFSFVF CCCEEHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEECEEEEE WDSDARIDGAAYLYRSDDTAMAALVTKEAADEVRVVSTQDVAAQKVDNAAFAYFVYMQLS ECCCCCCCCEEEEEECCCCCEEHHHHHHCCCCEEEEECCHHHHHHHCCHHEEEEEEEEHH AAAGPRLVPIAASVAYKLP CCCCCEEEEEEHEEEECCC >Mature Secondary Structure SRTRVAVLSTAFAVVAAGVFGLGFLRGAAEASAAPAPPPLSSEYPGGAPIDAARIQTGR CCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECC LTFERMPAEVSGALELHSAEIVKQAEVLATKQARITGTCAPGSAIRVVGQDGTVVCQRFP EEHHHCCCHHHCCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCEEEECCC RGVVSVSSLAGLPRVSTTATTQLSVPGGVGRYQSAGEDDFLVVPVDLPDGAVVTGFSFVF CCCEEHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEECEEEEE WDSDARIDGAAYLYRSDDTAMAALVTKEAADEVRVVSTQDVAAQKVDNAAFAYFVYMQLS ECCCCCCCCEEEEEECCCCCEEHHHHHHCCCCEEEEECCHHHHHHHCCHHEEEEEEEEHH AAAGPRLVPIAASVAYKLP CCCCCEEEEEEHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA