Definition Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession NC_011891
Length 5,029,329

Click here to switch to the map view.

The map label for this gene is yhbJ [C]

Identifier: 220915286

GI number: 220915286

Start: 183160

End: 184044

Strand: Direct

Name: yhbJ [C]

Synonym: A2cp1_0165

Alternate gene names: 220915286

Gene position: 183160-184044 (Clockwise)

Preceding gene: 220915285

Following gene: 220915287

Centisome position: 3.64

GC content: 72.66

Gene sequence:

>885_bases
ATGACCGCCACGGTGAGCCACGCCGGGCCGCAGGTGGTGATCCTCACCGGCGTGTCCGGCTCGGGGAAGTCCACCGCGCT
GCGCGCGCTGGAGGACGCCGGCTTCTACTGCGTCGACAACCTACCCATCGTCTTCCTCGAGAAGCTGCTCGAGCTCTCCG
GCCACACCGCCGGCGAGGTCTCGCGCATGGCGCTCGTGGTGGACGCGCGCGAGGGGCGCTTCCTGGTGGAGGCGCCGCGG
ATCATCCGCGAGCTCCGCCAGAAGGGCGCCGACGTGGAGGTGCTGTTCCTCGACGCCTCCGACGAGGCGCTGGTCCGGCG
CTACTCCGAGACGCGCCGCCGCCACCCGCTGGCCGGGGAGGGCGGCACCGTCCCCGACGGCATCGCGGCCGAGCGGCTGG
CGCTCGCGGACGTGCGCGGCATCGCCGACGAGGTGATCGACACCACCACGCTCAACGTCCACGAGCTGAAGCGGCTCGTC
ACCCGCCGCTTCGTGGCCGGCGAGGGCGCGAAGCTGGGCGTGACGCTCGTGTCCTTCGGGTTCCGGTTCGGCATCCCGAC
GCACGCCGACCTGGTGCTCGACGTGCGCTTCCTGCCGAACCCGTTCTTCGTGCCGGAGCTGAAGCCGCACCCCGGGACGG
ATCCGCGCGTGGCGGAGTTCGTGCTGGGCCAGGCGGACGCGAAGGCGTTCCTGGAGCGGCTCACGGACCTGCTCGGCTTC
CTGCTGCCGCGCTACCGGAACGAGGGGAAGAGCTACCTCACGATCGCCATCGGCTGCACCGGCGGCAAGCACCGCTCGGT
GGCGCTCGCCGCCGCGCTCGCCGAGCGGCTCGAGGGCTCCGGCCAGCCGGTCCGGCTCTGGCACCGCGACGTCGAGAAGG
AGTAG

Upstream 100 bases:

>100_bases
TCAAGCTCCAGGGGCACCACTCCGCCCGCGAGTTCCAGGAGCGACTGAACCGCGCCATCGCGCTCGCGCCGGGCGGGCGC
GTCGGGGAGATCGACGTCGA

Downstream 100 bases:

>100_bases
CCGCGCCCGGGCGTTCGGCGCTGGCCGCCGGGGCCCGCGGCGTATATGGTACGCGCGCGCCGGGGGGGCCGGACGCGGCC
GGCCGCTCATCCGCCGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTATVSHAGPQVVILTGVSGSGKSTALRALEDAGFYCVDNLPIVFLEKLLELSGHTAGEVSRMALVVDAREGRFLVEAPR
IIRELRQKGADVEVLFLDASDEALVRRYSETRRRHPLAGEGGTVPDGIAAERLALADVRGIADEVIDTTTLNVHELKRLV
TRRFVAGEGAKLGVTLVSFGFRFGIPTHADLVLDVRFLPNPFFVPELKPHPGTDPRVAEFVLGQADAKAFLERLTDLLGF
LLPRYRNEGKSYLTIAIGCTGGKHRSVALAAALAERLEGSGQPVRLWHRDVEKE

Sequences:

>Translated_294_residues
MTATVSHAGPQVVILTGVSGSGKSTALRALEDAGFYCVDNLPIVFLEKLLELSGHTAGEVSRMALVVDAREGRFLVEAPR
IIRELRQKGADVEVLFLDASDEALVRRYSETRRRHPLAGEGGTVPDGIAAERLALADVRGIADEVIDTTTLNVHELKRLV
TRRFVAGEGAKLGVTLVSFGFRFGIPTHADLVLDVRFLPNPFFVPELKPHPGTDPRVAEFVLGQADAKAFLERLTDLLGF
LLPRYRNEGKSYLTIAIGCTGGKHRSVALAAALAERLEGSGQPVRLWHRDVEKE
>Mature_293_residues
TATVSHAGPQVVILTGVSGSGKSTALRALEDAGFYCVDNLPIVFLEKLLELSGHTAGEVSRMALVVDAREGRFLVEAPRI
IRELRQKGADVEVLFLDASDEALVRRYSETRRRHPLAGEGGTVPDGIAAERLALADVRGIADEVIDTTTLNVHELKRLVT
RRFVAGEGAKLGVTLVSFGFRFGIPTHADLVLDVRFLPNPFFVPELKPHPGTDPRVAEFVLGQADAKAFLERLTDLLGFL
LPRYRNEGKSYLTIAIGCTGGKHRSVALAAALAERLEGSGQPVRLWHRDVEKE

Specific function: Displays ATPase and GTPase activities [H]

COG id: COG1660

COG function: function code R; Predicted P-loop-containing kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0042 family [H]

Homologues:

Organism=Escherichia coli, GI1789598, Length=285, Percent_Identity=42.1052631578947, Blast_Score=219, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR005337 [H]

Pfam domain/function: PF03668 ATP_bind_2 [H]

EC number: NA

Molecular weight: Translated: 31993; Mature: 31862

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATVSHAGPQVVILTGVSGSGKSTALRALEDAGFYCVDNLPIVFLEKLLELSGHTAGEV
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCC
SRMALVVDAREGRFLVEAPRIIRELRQKGADVEVLFLDASDEALVRRYSETRRRHPLAGE
EEEEEEEECCCCCEEEHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCC
GGTVPDGIAAERLALADVRGIADEVIDTTTLNVHELKRLVTRRFVAGEGAKLGVTLVSFG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHH
FRFGIPTHADLVLDVRFLPNPFFVPELKPHPGTDPRVAEFVLGQADAKAFLERLTDLLGF
HHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
LLPRYRNEGKSYLTIAIGCTGGKHRSVALAAALAERLEGSGQPVRLWHRDVEKE
HHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHCCCC
>Mature Secondary Structure 
TATVSHAGPQVVILTGVSGSGKSTALRALEDAGFYCVDNLPIVFLEKLLELSGHTAGEV
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCC
SRMALVVDAREGRFLVEAPRIIRELRQKGADVEVLFLDASDEALVRRYSETRRRHPLAGE
EEEEEEEECCCCCEEEHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCC
GGTVPDGIAAERLALADVRGIADEVIDTTTLNVHELKRLVTRRFVAGEGAKLGVTLVSFG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHH
FRFGIPTHADLVLDVRFLPNPFFVPELKPHPGTDPRVAEFVLGQADAKAFLERLTDLLGF
HHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
LLPRYRNEGKSYLTIAIGCTGGKHRSVALAAALAERLEGSGQPVRLWHRDVEKE
HHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA