| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yhbJ [C]
Identifier: 220915286
GI number: 220915286
Start: 183160
End: 184044
Strand: Direct
Name: yhbJ [C]
Synonym: A2cp1_0165
Alternate gene names: 220915286
Gene position: 183160-184044 (Clockwise)
Preceding gene: 220915285
Following gene: 220915287
Centisome position: 3.64
GC content: 72.66
Gene sequence:
>885_bases ATGACCGCCACGGTGAGCCACGCCGGGCCGCAGGTGGTGATCCTCACCGGCGTGTCCGGCTCGGGGAAGTCCACCGCGCT GCGCGCGCTGGAGGACGCCGGCTTCTACTGCGTCGACAACCTACCCATCGTCTTCCTCGAGAAGCTGCTCGAGCTCTCCG GCCACACCGCCGGCGAGGTCTCGCGCATGGCGCTCGTGGTGGACGCGCGCGAGGGGCGCTTCCTGGTGGAGGCGCCGCGG ATCATCCGCGAGCTCCGCCAGAAGGGCGCCGACGTGGAGGTGCTGTTCCTCGACGCCTCCGACGAGGCGCTGGTCCGGCG CTACTCCGAGACGCGCCGCCGCCACCCGCTGGCCGGGGAGGGCGGCACCGTCCCCGACGGCATCGCGGCCGAGCGGCTGG CGCTCGCGGACGTGCGCGGCATCGCCGACGAGGTGATCGACACCACCACGCTCAACGTCCACGAGCTGAAGCGGCTCGTC ACCCGCCGCTTCGTGGCCGGCGAGGGCGCGAAGCTGGGCGTGACGCTCGTGTCCTTCGGGTTCCGGTTCGGCATCCCGAC GCACGCCGACCTGGTGCTCGACGTGCGCTTCCTGCCGAACCCGTTCTTCGTGCCGGAGCTGAAGCCGCACCCCGGGACGG ATCCGCGCGTGGCGGAGTTCGTGCTGGGCCAGGCGGACGCGAAGGCGTTCCTGGAGCGGCTCACGGACCTGCTCGGCTTC CTGCTGCCGCGCTACCGGAACGAGGGGAAGAGCTACCTCACGATCGCCATCGGCTGCACCGGCGGCAAGCACCGCTCGGT GGCGCTCGCCGCCGCGCTCGCCGAGCGGCTCGAGGGCTCCGGCCAGCCGGTCCGGCTCTGGCACCGCGACGTCGAGAAGG AGTAG
Upstream 100 bases:
>100_bases TCAAGCTCCAGGGGCACCACTCCGCCCGCGAGTTCCAGGAGCGACTGAACCGCGCCATCGCGCTCGCGCCGGGCGGGCGC GTCGGGGAGATCGACGTCGA
Downstream 100 bases:
>100_bases CCGCGCCCGGGCGTTCGGCGCTGGCCGCCGGGGCCCGCGGCGTATATGGTACGCGCGCGCCGGGGGGGCCGGACGCGGCC GGCCGCTCATCCGCCGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTATVSHAGPQVVILTGVSGSGKSTALRALEDAGFYCVDNLPIVFLEKLLELSGHTAGEVSRMALVVDAREGRFLVEAPR IIRELRQKGADVEVLFLDASDEALVRRYSETRRRHPLAGEGGTVPDGIAAERLALADVRGIADEVIDTTTLNVHELKRLV TRRFVAGEGAKLGVTLVSFGFRFGIPTHADLVLDVRFLPNPFFVPELKPHPGTDPRVAEFVLGQADAKAFLERLTDLLGF LLPRYRNEGKSYLTIAIGCTGGKHRSVALAAALAERLEGSGQPVRLWHRDVEKE
Sequences:
>Translated_294_residues MTATVSHAGPQVVILTGVSGSGKSTALRALEDAGFYCVDNLPIVFLEKLLELSGHTAGEVSRMALVVDAREGRFLVEAPR IIRELRQKGADVEVLFLDASDEALVRRYSETRRRHPLAGEGGTVPDGIAAERLALADVRGIADEVIDTTTLNVHELKRLV TRRFVAGEGAKLGVTLVSFGFRFGIPTHADLVLDVRFLPNPFFVPELKPHPGTDPRVAEFVLGQADAKAFLERLTDLLGF LLPRYRNEGKSYLTIAIGCTGGKHRSVALAAALAERLEGSGQPVRLWHRDVEKE >Mature_293_residues TATVSHAGPQVVILTGVSGSGKSTALRALEDAGFYCVDNLPIVFLEKLLELSGHTAGEVSRMALVVDAREGRFLVEAPRI IRELRQKGADVEVLFLDASDEALVRRYSETRRRHPLAGEGGTVPDGIAAERLALADVRGIADEVIDTTTLNVHELKRLVT RRFVAGEGAKLGVTLVSFGFRFGIPTHADLVLDVRFLPNPFFVPELKPHPGTDPRVAEFVLGQADAKAFLERLTDLLGFL LPRYRNEGKSYLTIAIGCTGGKHRSVALAAALAERLEGSGQPVRLWHRDVEKE
Specific function: Displays ATPase and GTPase activities [H]
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family [H]
Homologues:
Organism=Escherichia coli, GI1789598, Length=285, Percent_Identity=42.1052631578947, Blast_Score=219, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR005337 [H]
Pfam domain/function: PF03668 ATP_bind_2 [H]
EC number: NA
Molecular weight: Translated: 31993; Mature: 31862
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATVSHAGPQVVILTGVSGSGKSTALRALEDAGFYCVDNLPIVFLEKLLELSGHTAGEV CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCC SRMALVVDAREGRFLVEAPRIIRELRQKGADVEVLFLDASDEALVRRYSETRRRHPLAGE EEEEEEEECCCCCEEEHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCC GGTVPDGIAAERLALADVRGIADEVIDTTTLNVHELKRLVTRRFVAGEGAKLGVTLVSFG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHH FRFGIPTHADLVLDVRFLPNPFFVPELKPHPGTDPRVAEFVLGQADAKAFLERLTDLLGF HHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH LLPRYRNEGKSYLTIAIGCTGGKHRSVALAAALAERLEGSGQPVRLWHRDVEKE HHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHCCCC >Mature Secondary Structure TATVSHAGPQVVILTGVSGSGKSTALRALEDAGFYCVDNLPIVFLEKLLELSGHTAGEV CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCC SRMALVVDAREGRFLVEAPRIIRELRQKGADVEVLFLDASDEALVRRYSETRRRHPLAGE EEEEEEEECCCCCEEEHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCC GGTVPDGIAAERLALADVRGIADEVIDTTTLNVHELKRLVTRRFVAGEGAKLGVTLVSFG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHH FRFGIPTHADLVLDVRFLPNPFFVPELKPHPGTDPRVAEFVLGQADAKAFLERLTDLLGF HHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH LLPRYRNEGKSYLTIAIGCTGGKHRSVALAAALAERLEGSGQPVRLWHRDVEKE HHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA