| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220914924
Identifier: 220914924
GI number: 220914924
Start: 299142
End: 300722
Strand: Reverse
Name: 220914924
Synonym: Mnod_8077
Alternate gene names: NA
Gene position: 300722-299142 (Counterclockwise)
Preceding gene: 220914925
Following gene: 220914921
Centisome position: 65.65
GC content: 74.57
Gene sequence:
>1581_bases ATGCCGGACGAGAGCCAGAGCGAGACTGTGGACTTCCTCCGGCGCTGCCTTGCCGGTCACGGCAGGCTCGAGACGATCCG CACGCACATCTCCGTCGTGCTCCTGGCGGAGGATCGCGTGTACAAGCTCAAGCGCGCGGTGCGCTTCCCCTTCGTCGATT TCTCGGCGCCGGAGGCGCGGCTGGCGGCCTGCGAGGCCGAGCTCGCCCTCAACCGCCGCACGGCGCCCGCCCTGTATCGC GGGGTGCACCGGATCACGCGGACGCCCGACGGGGGGCTCGCCCTCGACGGCACCGGCCCCCTGGTCGACGCGGTCGTGGC GATGCGGCGCTTCCCGCAAGGTGACCTGTTCGACGCCATGACCCGGGAGGGGCGGCTCACCCCCGCCCTCGTCGCCGCCC TCGCTCACCGCATCGCCGCCTTCCACGCCGCCGCGGAGATCAGCCGCGCCCCTGGCGGTGCGGCCGCCATGGCGGCCCTC GTCGCCCTGAACGACCGGGGGCTGCGGGCCTGCGGGCTCGCAAGCGCCGGAGAGGCCGACGCCCTCACGGCCCGCTTCGA GGCCGCGCTCGCCCGGCACGGCGACCGGCTGGAGGCGCGGCGCGCCGCCGGCAAGGTGCGCCGCTGCCATGGCGACCTGA CGCTGCGCAACATCTGCCTGTACGAGGGGGTGCCGACGCCGTTCGACTGCCTCGAATTCGACGAGGCCCTCGCCACGATC GACGTGCTCTACGACCTCGCCTTCGTGCTGATGGATCTGTGGCATCGCGGCCGGCGCGACCTCGCGAACCTGCTGTTCAA CCGCTACTTGGACGAGAGCGACGAGGCGGACGGCGCCGGCCTGCTGCCTTTCCTGATGGCGATCCGCGCCGTCATCCGCG CGCATGTCACGGCGACCCAGGCGGCGGAGGCGCCCGGCGAGACTGCCCGTGCGCTGCGGGACGAGGCGCGGGCCTATCTC GATCTCGCCGGCACCCTGCTCGCCGAGGAACCTGCGACCCTGGTGGCGGTCGGGGGCCTGAGCGGATCCGGCAAGTCGAC CTTCGCCGCCGCGCTCGCGCCCTGGCTCGGCGCCCCGCCCGGGGCGCGCATCGTGAGCAGCGACCGCACGCGCAAGCGCC TGCACGGCGTCAGCGCCGTGACGCGGCTCTCCGACTCGGCCTATGCGCCCTCCGTCTCCGAACGGGTCTATGCGGCGATG CGCGACGAGGCGGCCCGGGTGCTCGCCACCGGCGGCGCAGTGATCCTCGATGCGGTCTTCGATCGTCCCGAGGCACGGGA GGCCGTCGAAGCGCTGGCACGGCGGTGCGGCGTCCCCTTCCGGGGGGTGTGGCTGCAGGCGCCCGCGGCGATGCTCGCGG CCCGCATCCGCGCCCGGCGGGACGATCCCTCCGACGCCACGATCGAGGTCCTGGCCGCGCAGGCCAGCCGCGACTGCGGC CCGATGACGTGGCATTGCCTCGACGCGCAGCTGCCGGCGGAGACGTTGCGCGCGACGATCCTGGCGAGCTGCGGAACGGG CGAGGCGAAGGCCGAGGCGAGCCGGGGCGGGACCGCGGGGACCGAGGTGCTCCCGGCCTGA
Upstream 100 bases:
>100_bases AGCCGTGGGCGATCCGCGCACGGAGCCGGCCGCCGCGGCGGGCCCGCGCGGGCGCGCAGGCGAATCTGGTTTGACCCCCT CATGTGACGGGACCGATGCC
Downstream 100 bases:
>100_bases CGGATGAAGCCTCAGGATGAGCCATAGGAATCGGTGCACCCCGAGATGGTGCGTTGTCGATCGAGACCGCGTCAGCCCAC GCAAGGATGTCCGCCTGACG
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MPDESQSETVDFLRRCLAGHGRLETIRTHISVVLLAEDRVYKLKRAVRFPFVDFSAPEARLAACEAELALNRRTAPALYR GVHRITRTPDGGLALDGTGPLVDAVVAMRRFPQGDLFDAMTREGRLTPALVAALAHRIAAFHAAAEISRAPGGAAAMAAL VALNDRGLRACGLASAGEADALTARFEAALARHGDRLEARRAAGKVRRCHGDLTLRNICLYEGVPTPFDCLEFDEALATI DVLYDLAFVLMDLWHRGRRDLANLLFNRYLDESDEADGAGLLPFLMAIRAVIRAHVTATQAAEAPGETARALRDEARAYL DLAGTLLAEEPATLVAVGGLSGSGKSTFAAALAPWLGAPPGARIVSSDRTRKRLHGVSAVTRLSDSAYAPSVSERVYAAM RDEAARVLATGGAVILDAVFDRPEAREAVEALARRCGVPFRGVWLQAPAAMLAARIRARRDDPSDATIEVLAAQASRDCG PMTWHCLDAQLPAETLRATILASCGTGEAKAEASRGGTAGTEVLPA
Sequences:
>Translated_526_residues MPDESQSETVDFLRRCLAGHGRLETIRTHISVVLLAEDRVYKLKRAVRFPFVDFSAPEARLAACEAELALNRRTAPALYR GVHRITRTPDGGLALDGTGPLVDAVVAMRRFPQGDLFDAMTREGRLTPALVAALAHRIAAFHAAAEISRAPGGAAAMAAL VALNDRGLRACGLASAGEADALTARFEAALARHGDRLEARRAAGKVRRCHGDLTLRNICLYEGVPTPFDCLEFDEALATI DVLYDLAFVLMDLWHRGRRDLANLLFNRYLDESDEADGAGLLPFLMAIRAVIRAHVTATQAAEAPGETARALRDEARAYL DLAGTLLAEEPATLVAVGGLSGSGKSTFAAALAPWLGAPPGARIVSSDRTRKRLHGVSAVTRLSDSAYAPSVSERVYAAM RDEAARVLATGGAVILDAVFDRPEAREAVEALARRCGVPFRGVWLQAPAAMLAARIRARRDDPSDATIEVLAAQASRDCG PMTWHCLDAQLPAETLRATILASCGTGEAKAEASRGGTAGTEVLPA >Mature_525_residues PDESQSETVDFLRRCLAGHGRLETIRTHISVVLLAEDRVYKLKRAVRFPFVDFSAPEARLAACEAELALNRRTAPALYRG VHRITRTPDGGLALDGTGPLVDAVVAMRRFPQGDLFDAMTREGRLTPALVAALAHRIAAFHAAAEISRAPGGAAAMAALV ALNDRGLRACGLASAGEADALTARFEAALARHGDRLEARRAAGKVRRCHGDLTLRNICLYEGVPTPFDCLEFDEALATID VLYDLAFVLMDLWHRGRRDLANLLFNRYLDESDEADGAGLLPFLMAIRAVIRAHVTATQAAEAPGETARALRDEARAYLD LAGTLLAEEPATLVAVGGLSGSGKSTFAAALAPWLGAPPGARIVSSDRTRKRLHGVSAVTRLSDSAYAPSVSERVYAAMR DEAARVLATGGAVILDAVFDRPEAREAVEALARRCGVPFRGVWLQAPAAMLAARIRARRDDPSDATIEVLAAQASRDCGP MTWHCLDAQLPAETLRATILASCGTGEAKAEASRGGTAGTEVLPA
Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]
COG id: COG2187
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 56020; Mature: 55888
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDESQSETVDFLRRCLAGHGRLETIRTHISVVLLAEDRVYKLKRAVRFPFVDFSAPEAR CCCCCHHHHHHHHHHHHHCCCHHHHHHHHEEEEEEECHHHHHHHHHHHCCCCCCCCCHHH LAACEAELALNRRTAPALYRGVHRITRTPDGGLALDGTGPLVDAVVAMRRFPQGDLFDAM HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHH TREGRLTPALVAALAHRIAAFHAAAEISRAPGGAAAMAALVALNDRGLRACGLASAGEAD HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH ALTARFEAALARHGDRLEARRAAGKVRRCHGDLTLRNICLYEGVPTPFDCLEFDEALATI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCHHHHHHHHHHHHH DVLYDLAFVLMDLWHRGRRDLANLLFNRYLDESDEADGAGLLPFLMAIRAVIRAHVTATQ HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAEAPGETARALRDEARAYLDLAGTLLAEEPATLVAVGGLSGSGKSTFAAALAPWLGAPP HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCC GARIVSSDRTRKRLHGVSAVTRLSDSAYAPSVSERVYAAMRDEAARVLATGGAVILDAVF CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DRPEAREAVEALARRCGVPFRGVWLQAPAAMLAARIRARRDDPSDATIEVLAAQASRDCG CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC PMTWHCLDAQLPAETLRATILASCGTGEAKAEASRGGTAGTEVLPA CCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PDESQSETVDFLRRCLAGHGRLETIRTHISVVLLAEDRVYKLKRAVRFPFVDFSAPEAR CCCCHHHHHHHHHHHHHCCCHHHHHHHHEEEEEEECHHHHHHHHHHHCCCCCCCCCHHH LAACEAELALNRRTAPALYRGVHRITRTPDGGLALDGTGPLVDAVVAMRRFPQGDLFDAM HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHH TREGRLTPALVAALAHRIAAFHAAAEISRAPGGAAAMAALVALNDRGLRACGLASAGEAD HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH ALTARFEAALARHGDRLEARRAAGKVRRCHGDLTLRNICLYEGVPTPFDCLEFDEALATI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCHHHHHHHHHHHHH DVLYDLAFVLMDLWHRGRRDLANLLFNRYLDESDEADGAGLLPFLMAIRAVIRAHVTATQ HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAEAPGETARALRDEARAYLDLAGTLLAEEPATLVAVGGLSGSGKSTFAAALAPWLGAPP HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCC GARIVSSDRTRKRLHGVSAVTRLSDSAYAPSVSERVYAAMRDEAARVLATGGAVILDAVF CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DRPEAREAVEALARRCGVPFRGVWLQAPAAMLAARIRARRDDPSDATIEVLAAQASRDCG CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC PMTWHCLDAQLPAETLRATILASCGTGEAKAEASRGGTAGTEVLPA CCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]