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The map label for this gene is insH5 [C]

Identifier: 220914921

GI number: 220914921

Start: 294807

End: 296189

Strand: Reverse

Name: insH5 [C]

Synonym: Mnod_8073

Alternate gene names: 220914921

Gene position: 296189-294807 (Counterclockwise)

Preceding gene: 220914924

Following gene: 220914914

Centisome position: 64.66

GC content: 68.76

Gene sequence:

>1383_bases
ATGATGGGACCTCGGCAAGTCGAGCAGGGCGCCCTGTTTTACGAGTTCTCGCTCGATACCCACGTACCCGCCGACCATCT
CCTGCGCGCCATCGACCGCTTCGTCGACCTGTCGGGCCTACGCGCGCACCTGCGTCCCTTCTACAGCACCACGGGTCGGC
CTTCGGTCGATCCCGAGCTGATGGTTCGCATGCTGCTCGTCGGCTACTGCTTCGGCATCCGCTCCGAGCGCCGTCTGTGC
GAGGAGGTGCATCTCAACCTCGCCTACCGCTGGTTCTGCCGGCTCGGGTTGGATGGCGCGGTGCCCGACCACTCGACCTT
CTCCAAGAACCGACACGGTCGTTTCCGTGACAGCGACCTGCTGCGCGAGGTGTTCGAGACCACCGTGCAGCGCTGCATCG
AGGAGGGGCTGGTCGGTGGCGAGGGCTTCGCGGTCGATGCCAGCCTGATCCGGGCCGATGCCAACAAGCAGCGCTCCGCA
GACGCCTCCGAGGCCGTCGACTGGAACGATCTCGCCCGGATCCGCCGGTCGGTGCGCGAGTACCTCGACACCCTCGACGA
AGCCGCCTGGGGAGCAGCGAGCGAGGTCCAGCCGAAGTTCGTCTCCCGCTCCGACCCGGCGGCGCAGTGGACGGGCGCGC
TGAAGGGCCATGCCTTCTTCGCCTACGCCACCAACTACCTGATCGACCTCGACCACGCCGTGATCGTCGATGTCGAGGCC
AGCCGCGCCATCCGGCAGGCGGAGGTCGGGGCAGCCCGCACCATGATCGCGCGCGCGCAGGACCGCTTCGGGCTGTGGCC
GGCCCGGCTTGCGGCCGACAGTGCCTACGGGTCGGCCGAGCAGCTCGCTTGGCTCGTGCACGAGCGCGGGATCGAGCCGC
ACATCCCCGTCTTCGACAAGTCCGAGCGCCGCGATGGCACCTTCAGCCGGTCAGCCTTCACCTACGACCCTGCAGCCGAT
GCCTACACCTGCCCGGCCGGCCACCCATTGCGGCCACGCCAGAAGGTCTATCGGACGCCGTTCCCGCTCGTCGACGACGA
TGGCATGATGCGCTACCGGGCCAGCAAGCGCGACTGCGACGCCTGCGCGCTGAAGCCACGATGCTGCCCCACCACACCCG
CCCGCAAGATCCCGCGCTCGATCCACGAAGGCGCCCGGCAGATGGCGCGCGACATCTGCGCCTCGGAGGAGGGCCGCACC
TCGCGGCGCGAGCGCAAGAAGGTCGAGATGTTGTTCGCCCACCTCAAGCGAATCCTGAAGCTGGATCGGCTGCGGCTGCG
GGGTCCGAACGGGGCCCGGGACGAGTTCCACCTCGCCGCAGCGGCCCAGAACCTCAGGAAGCTCGCCCAGCTGATCCCGC
TACAGCAGCTGAGCCCGGCCTGA

Upstream 100 bases:

>100_bases
ACGCTACTCCCGCAAAGCGCCGATTCTGTTGAAAAACTCCGCTGTTGCGGCGGTAGTCGCGGGGTGATTCACTCCTGTCG
AAAGACGGAGATCGAAGCAG

Downstream 100 bases:

>100_bases
TCGGCCGGGATCCCCCTCATGTTGGATCGGCTCGCTCAGCCGATCGGTGCTCGATCCAGATCGCCCGCGAGTTTTTCAAC
GAAATCCGCCAGGAGCCGAC

Product: transposase IS4 family protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; Transposase IS4 Family; IS4 Family Transposase; ISPsy22 Transposase Truncated; IS5 Family Transposase N-Terminal Domain Protein; Transposase Is4 Family Protein; ISPsy6 Transposase; Transposase And Inactivated Derivative; ISGsu3 Transposase; Transposase For Insertion Sequence Element; ISMca1 Transposase; IS5 Family Transposase N-Terminal Domain; Transposase Fragment IS5 Family; ISCps6 Transposase; IS4 Transposase; Transposase For IS; Acyl-CoA N-Acyltransferase Domain; ISPpu20 Transposase; Transposase-Related Protein; Transposase Mutator Type; Phage-Associated Cell Wall Hydrolase; Transposase Truncated; ISGsu2 Transposase; Transposase Is4 Family; Transposase For Insertion Sequence NGRIS-8b; ISSag8 Transposase; IS5 Family Transposase; Transposase Fragment

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MMGPRQVEQGALFYEFSLDTHVPADHLLRAIDRFVDLSGLRAHLRPFYSTTGRPSVDPELMVRMLLVGYCFGIRSERRLC
EEVHLNLAYRWFCRLGLDGAVPDHSTFSKNRHGRFRDSDLLREVFETTVQRCIEEGLVGGEGFAVDASLIRADANKQRSA
DASEAVDWNDLARIRRSVREYLDTLDEAAWGAASEVQPKFVSRSDPAAQWTGALKGHAFFAYATNYLIDLDHAVIVDVEA
SRAIRQAEVGAARTMIARAQDRFGLWPARLAADSAYGSAEQLAWLVHERGIEPHIPVFDKSERRDGTFSRSAFTYDPAAD
AYTCPAGHPLRPRQKVYRTPFPLVDDDGMMRYRASKRDCDACALKPRCCPTTPARKIPRSIHEGARQMARDICASEEGRT
SRRERKKVEMLFAHLKRILKLDRLRLRGPNGARDEFHLAAAAQNLRKLAQLIPLQQLSPA

Sequences:

>Translated_460_residues
MMGPRQVEQGALFYEFSLDTHVPADHLLRAIDRFVDLSGLRAHLRPFYSTTGRPSVDPELMVRMLLVGYCFGIRSERRLC
EEVHLNLAYRWFCRLGLDGAVPDHSTFSKNRHGRFRDSDLLREVFETTVQRCIEEGLVGGEGFAVDASLIRADANKQRSA
DASEAVDWNDLARIRRSVREYLDTLDEAAWGAASEVQPKFVSRSDPAAQWTGALKGHAFFAYATNYLIDLDHAVIVDVEA
SRAIRQAEVGAARTMIARAQDRFGLWPARLAADSAYGSAEQLAWLVHERGIEPHIPVFDKSERRDGTFSRSAFTYDPAAD
AYTCPAGHPLRPRQKVYRTPFPLVDDDGMMRYRASKRDCDACALKPRCCPTTPARKIPRSIHEGARQMARDICASEEGRT
SRRERKKVEMLFAHLKRILKLDRLRLRGPNGARDEFHLAAAAQNLRKLAQLIPLQQLSPA
>Mature_460_residues
MMGPRQVEQGALFYEFSLDTHVPADHLLRAIDRFVDLSGLRAHLRPFYSTTGRPSVDPELMVRMLLVGYCFGIRSERRLC
EEVHLNLAYRWFCRLGLDGAVPDHSTFSKNRHGRFRDSDLLREVFETTVQRCIEEGLVGGEGFAVDASLIRADANKQRSA
DASEAVDWNDLARIRRSVREYLDTLDEAAWGAASEVQPKFVSRSDPAAQWTGALKGHAFFAYATNYLIDLDHAVIVDVEA
SRAIRQAEVGAARTMIARAQDRFGLWPARLAADSAYGSAEQLAWLVHERGIEPHIPVFDKSERRDGTFSRSAFTYDPAAD
AYTCPAGHPLRPRQKVYRTPFPLVDDDGMMRYRASKRDCDACALKPRCCPTTPARKIPRSIHEGARQMARDICASEEGRT
SRRERKKVEMLFAHLKRILKLDRLRLRGPNGARDEFHLAAAAQNLRKLAQLIPLQQLSPA

Specific function: Involved in the transposition of the insertion sequence is5 [C]

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51919; Mature: 51919

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGPRQVEQGALFYEFSLDTHVPADHLLRAIDRFVDLSGLRAHLRPFYSTTGRPSVDPEL
CCCCHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
MVRMLLVGYCFGIRSERRLCEEVHLNLAYRWFCRLGLDGAVPDHSTFSKNRHGRFRDSDL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
LREVFETTVQRCIEEGLVGGEGFAVDASLIRADANKQRSADASEAVDWNDLARIRRSVRE
HHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCHHHCCCHHHCCCHHHHHHHHHHHHH
YLDTLDEAAWGAASEVQPKFVSRSDPAAQWTGALKGHAFFAYATNYLIDLDHAVIVDVEA
HHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHCCCEEHEEHHHHHEECCCEEEEEEHH
SRAIRQAEVGAARTMIARAQDRFGLWPARLAADSAYGSAEQLAWLVHERGIEPHIPVFDK
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC
SERRDGTFSRSAFTYDPAADAYTCPAGHPLRPRQKVYRTPFPLVDDDGMMRYRASKRDCD
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCC
ACALKPRCCPTTPARKIPRSIHEGARQMARDICASEEGRTSRRERKKVEMLFAHLKRILK
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDRLRLRGPNGARDEFHLAAAAQNLRKLAQLIPLQQLSPA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCC
>Mature Secondary Structure
MMGPRQVEQGALFYEFSLDTHVPADHLLRAIDRFVDLSGLRAHLRPFYSTTGRPSVDPEL
CCCCHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
MVRMLLVGYCFGIRSERRLCEEVHLNLAYRWFCRLGLDGAVPDHSTFSKNRHGRFRDSDL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
LREVFETTVQRCIEEGLVGGEGFAVDASLIRADANKQRSADASEAVDWNDLARIRRSVRE
HHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCHHHCCCHHHCCCHHHHHHHHHHHHH
YLDTLDEAAWGAASEVQPKFVSRSDPAAQWTGALKGHAFFAYATNYLIDLDHAVIVDVEA
HHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHCCCEEHEEHHHHHEECCCEEEEEEHH
SRAIRQAEVGAARTMIARAQDRFGLWPARLAADSAYGSAEQLAWLVHERGIEPHIPVFDK
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC
SERRDGTFSRSAFTYDPAADAYTCPAGHPLRPRQKVYRTPFPLVDDDGMMRYRASKRDCD
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCC
ACALKPRCCPTTPARKIPRSIHEGARQMARDICASEEGRTSRRERKKVEMLFAHLKRILK
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDRLRLRGPNGARDEFHLAAAAQNLRKLAQLIPLQQLSPA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA