| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is braF [H]
Identifier: 220914812
GI number: 220914812
Start: 173402
End: 174160
Strand: Reverse
Name: braF [H]
Synonym: Mnod_7949
Alternate gene names: 220914812
Gene position: 174160-173402 (Counterclockwise)
Preceding gene: 220914813
Following gene: 220914811
Centisome position: 38.02
GC content: 71.41
Gene sequence:
>759_bases ATGACGCCGGTCCTTGAGATCGCCGGCCTCGACAAGCGCTTCGGCGGGATCGTCGTGGCGGACGGCATCGACCTGACGCT CCCGGCCGGGCGCATCGTCGGGCTGATCGGGCCGAACGGCGCCGGCAAGACCTCGCTGTTCAACCTGATCTCCGGAGTCT TCCCGTCCGATGCGGGCACGATCCGCCTCGACGGGCAGCGCCTCGACGGACTGCCGATGCACCGCCGCGCCGGCCTCGGC CTCGCCCGCACTTGGCAGAATCTCCGGCTATTCCCGTCCCTGTCGGTCCTCGACAACCTTATGGTGGGGCCGCGCCGCTA CCCGGGCGACCGATTGCTGCGCCTGGCCCTCGATCCATTCGGGGTGCGGGCGCAGGAGGCCGAGACGCGCCGGCGCGCCC GCGAGATCCTGGAGCGGACGCGGCTCGCGGCGGTCGCCGCGACCCGCGCAGCCGACCTCACCTTCGGCCAGCAGAAGCTT GTCGGCGTCGCCCGCGCCCTCATGAACGACGCCCGCTGCCTTCTCCTCGACGAGCCGATGGCTGGGGTCGAGGGGCAGGC CTACGAGGTCATGCAGCAGGTGGTGCGGGACGTGGCCGCGGGCGGCGTCGCGGTCTGCGTCGTCGAGCACAACGTCGCCT TCATCCGCGACCTCTGCGACGAGGGGGTGTTCATGTTCGCCGGCAAGGTGCTGGCGCGCGGACCCGTCGCCGACCTGATC GCCGATCCGCGCCTGACCGAGCTGTATTTCGGGACCTGA
Upstream 100 bases:
>100_bases TCATGTTCACCGGCCTCGTCCTCGTCTTCATGTTCTGGCGGCCGCAAGGGCTGATCGCCGCCGGCGACGCGTGGCGCCCC TCGAAGCGGGAGACCGCCTG
Downstream 100 bases:
>100_bases GACGATGCTGGAGATCCGTTCGCTCTCGGCCGGCTACGGCACGCTCACCGCCCTCGACGGCATTTCCGCCCGGCTGTCGG CGGGTGCCCGGCTCGGCATC
Product: ABC transporter related
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTPVLEIAGLDKRFGGIVVADGIDLTLPAGRIVGLIGPNGAGKTSLFNLISGVFPSDAGTIRLDGQRLDGLPMHRRAGLG LARTWQNLRLFPSLSVLDNLMVGPRRYPGDRLLRLALDPFGVRAQEAETRRRAREILERTRLAAVAATRAADLTFGQQKL VGVARALMNDARCLLLDEPMAGVEGQAYEVMQQVVRDVAAGGVAVCVVEHNVAFIRDLCDEGVFMFAGKVLARGPVADLI ADPRLTELYFGT
Sequences:
>Translated_252_residues MTPVLEIAGLDKRFGGIVVADGIDLTLPAGRIVGLIGPNGAGKTSLFNLISGVFPSDAGTIRLDGQRLDGLPMHRRAGLG LARTWQNLRLFPSLSVLDNLMVGPRRYPGDRLLRLALDPFGVRAQEAETRRRAREILERTRLAAVAATRAADLTFGQQKL VGVARALMNDARCLLLDEPMAGVEGQAYEVMQQVVRDVAAGGVAVCVVEHNVAFIRDLCDEGVFMFAGKVLARGPVADLI ADPRLTELYFGT >Mature_251_residues TPVLEIAGLDKRFGGIVVADGIDLTLPAGRIVGLIGPNGAGKTSLFNLISGVFPSDAGTIRLDGQRLDGLPMHRRAGLGL ARTWQNLRLFPSLSVLDNLMVGPRRYPGDRLLRLALDPFGVRAQEAETRRRAREILERTRLAAVAATRAADLTFGQQKLV GVARALMNDARCLLLDEPMAGVEGQAYEVMQQVVRDVAAGGVAVCVVEHNVAFIRDLCDEGVFMFAGKVLARGPVADLIA DPRLTELYFGT
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI46592964, Length=245, Percent_Identity=26.1224489795918, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI46592956, Length=245, Percent_Identity=26.1224489795918, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI46592898, Length=245, Percent_Identity=26.1224489795918, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI46592915, Length=245, Percent_Identity=26.1224489795918, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI46592971, Length=245, Percent_Identity=26.1224489795918, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI46592978, Length=245, Percent_Identity=26.1224489795918, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI171184400, Length=227, Percent_Identity=25.9911894273128, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI215820660, Length=213, Percent_Identity=26.7605633802817, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI20143975, Length=213, Percent_Identity=26.7605633802817, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI27436953, Length=227, Percent_Identity=27.7533039647577, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI89111135, Length=225, Percent_Identity=27.5555555555556, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI27881501, Length=184, Percent_Identity=28.2608695652174, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI30795238, Length=184, Percent_Identity=28.2608695652174, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI21729873, Length=224, Percent_Identity=26.3392857142857, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI15149474, Length=224, Percent_Identity=26.3392857142857, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI156105685, Length=201, Percent_Identity=27.8606965174129, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI105990541, Length=164, Percent_Identity=28.6585365853659, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI255708477, Length=233, Percent_Identity=24.8927038626609, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI9955968, Length=179, Percent_Identity=25.1396648044693, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI9955966, Length=179, Percent_Identity=25.1396648044693, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI45243524, Length=179, Percent_Identity=25.1396648044693, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI21536378, Length=224, Percent_Identity=23.6607142857143, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1789864, Length=250, Percent_Identity=32, Blast_Score=144, Evalue=8e-36, Organism=Escherichia coli, GI1789593, Length=248, Percent_Identity=31.4516129032258, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1788225, Length=248, Percent_Identity=31.0483870967742, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI1790525, Length=241, Percent_Identity=28.2157676348548, Blast_Score=117, Evalue=7e-28, Organism=Escherichia coli, GI1787029, Length=253, Percent_Identity=29.2490118577075, Blast_Score=114, Evalue=4e-27, Organism=Escherichia coli, GI1788472, Length=239, Percent_Identity=25.9414225941423, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1789991, Length=248, Percent_Identity=28.6290322580645, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1790190, Length=253, Percent_Identity=26.8774703557312, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI48995001, Length=219, Percent_Identity=30.5936073059361, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1787370, Length=245, Percent_Identity=28.9795918367347, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1787792, Length=241, Percent_Identity=29.045643153527, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1786872, Length=213, Percent_Identity=29.1079812206573, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1788897, Length=233, Percent_Identity=30.4721030042918, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788761, Length=228, Percent_Identity=29.8245614035088, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1790544, Length=260, Percent_Identity=28.0769230769231, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI87081709, Length=240, Percent_Identity=27.9166666666667, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87081791, Length=255, Percent_Identity=28.6274509803922, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787712, Length=245, Percent_Identity=27.3469387755102, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787089, Length=247, Percent_Identity=27.9352226720648, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI48994943, Length=236, Percent_Identity=27.9661016949153, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1789672, Length=245, Percent_Identity=25.3061224489796, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1786563, Length=234, Percent_Identity=29.9145299145299, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787105, Length=221, Percent_Identity=29.8642533936652, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786319, Length=242, Percent_Identity=27.6859504132231, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1788210, Length=221, Percent_Identity=26.6968325791855, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1786345, Length=240, Percent_Identity=28.75, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI87081782, Length=238, Percent_Identity=28.9915966386555, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786398, Length=248, Percent_Identity=23.3870967741935, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1788450, Length=245, Percent_Identity=27.3469387755102, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1788644, Length=257, Percent_Identity=28.7937743190661, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1790467, Length=240, Percent_Identity=25.8333333333333, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1790739, Length=233, Percent_Identity=26.6094420600858, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI87082268, Length=252, Percent_Identity=26.1904761904762, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787759, Length=261, Percent_Identity=26.4367816091954, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789586, Length=235, Percent_Identity=27.6595744680851, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI87081834, Length=225, Percent_Identity=25.3333333333333, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788506, Length=250, Percent_Identity=26.4, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI2367384, Length=232, Percent_Identity=25.8620689655172, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1786253, Length=219, Percent_Identity=25.5707762557078, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787500, Length=229, Percent_Identity=22.2707423580786, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787143, Length=238, Percent_Identity=25.2100840336134, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787547, Length=260, Percent_Identity=23.8461538461538, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI87082267, Length=183, Percent_Identity=27.3224043715847, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1786654, Length=233, Percent_Identity=26.6094420600858, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1788053, Length=197, Percent_Identity=30.4568527918782, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1787164, Length=230, Percent_Identity=26.9565217391304, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1789873, Length=207, Percent_Identity=27.0531400966184, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786703, Length=235, Percent_Identity=23.8297872340426, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25146777, Length=227, Percent_Identity=25.9911894273128, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI212646699, Length=228, Percent_Identity=25.4385964912281, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI115533592, Length=204, Percent_Identity=26.9607843137255, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71984940, Length=227, Percent_Identity=25.1101321585903, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17541710, Length=232, Percent_Identity=25, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI71983523, Length=215, Percent_Identity=25.5813953488372, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71983516, Length=215, Percent_Identity=25.5813953488372, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71983510, Length=215, Percent_Identity=25.5813953488372, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115533608, Length=222, Percent_Identity=23.4234234234234, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17567269, Length=237, Percent_Identity=24.0506329113924, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193208177, Length=229, Percent_Identity=25.3275109170306, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI28574150, Length=229, Percent_Identity=25.764192139738, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI116007328, Length=229, Percent_Identity=25.764192139738, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI28574533, Length=216, Percent_Identity=26.3888888888889, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24666092, Length=237, Percent_Identity=26.5822784810127, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI45552337, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552351, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552345, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552347, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552339, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552335, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552363, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552343, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24583969, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552361, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI45552355, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI45552353, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI45552349, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI45552341, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI45552359, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI45552357, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI45550972, Length=243, Percent_Identity=26.3374485596708, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI24643674, Length=193, Percent_Identity=26.9430051813472, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI17136662, Length=229, Percent_Identity=26.6375545851528, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28574744, Length=221, Percent_Identity=25.3393665158371, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28574259, Length=251, Percent_Identity=25.8964143426295, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI221512771, Length=181, Percent_Identity=27.0718232044199, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27129; Mature: 26998
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVLEIAGLDKRFGGIVVADGIDLTLPAGRIVGLIGPNGAGKTSLFNLISGVFPSDAGT CCCCHHHCCCCHHHCCEEEECCCEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCE IRLDGQRLDGLPMHRRAGLGLARTWQNLRLFPSLSVLDNLMVGPRRYPGDRLLRLALDPF EEECCCCCCCCCCHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHEEHHHCCCC GVRAQEAETRRRAREILERTRLAAVAATRAADLTFGQQKLVGVARALMNDARCLLLDEPM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCC AGVEGQAYEVMQQVVRDVAAGGVAVCVVEHNVAFIRDLCDEGVFMFAGKVLARGPVADLI CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCHHHHH ADPRLTELYFGT CCCCHHEEECCC >Mature Secondary Structure TPVLEIAGLDKRFGGIVVADGIDLTLPAGRIVGLIGPNGAGKTSLFNLISGVFPSDAGT CCCHHHCCCCHHHCCEEEECCCEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCE IRLDGQRLDGLPMHRRAGLGLARTWQNLRLFPSLSVLDNLMVGPRRYPGDRLLRLALDPF EEECCCCCCCCCCHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHEEHHHCCCC GVRAQEAETRRRAREILERTRLAAVAATRAADLTFGQQKLVGVARALMNDARCLLLDEPM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCC AGVEGQAYEVMQQVVRDVAAGGVAVCVVEHNVAFIRDLCDEGVFMFAGKVLARGPVADLI CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCHHHHH ADPRLTELYFGT CCCCHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]