| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220914795
Identifier: 220914795
GI number: 220914795
Start: 156393
End: 157400
Strand: Reverse
Name: 220914795
Synonym: Mnod_7929
Alternate gene names: NA
Gene position: 157400-156393 (Counterclockwise)
Preceding gene: 220914796
Following gene: 220914794
Centisome position: 34.36
GC content: 62.3
Gene sequence:
>1008_bases ATGAAAGCAGTGCGACGCTGGTTGGCCTGCCTGGCCATGATCCCGCTCATGGCCGCCGCCGCCTCGGCCCAAGACAAACC GAAGATCAAGCTCGGCTTCGCCAAATGCGCCCATTGCACCCCGCTGGTGCTCACGCCCGAATACGCGAAGGACATCGATC TTGAGGTGGTGCCCTTTAATACGGGCAACGACGTGCTGACCGCGCTCGTCTCGAAGAGCATCGATGTCGGGCAGATCACC TACCTTCACTACGCGACCGCCCTCGACAAGGGCTTCGACGTCATGGCGATCTCCGGCCAGGTGAATGGCGGCTCGCAGAT CCTGCTGAGCAACGACCTGCCGGTGGAGCCCAACGATTGGGCTGGGCTGAAGACGATGATCGCGGAGCGCAAGGCGGCCG GCAAGCCGCTGAAGGTTGCTGCGTCCCGCGGCAACGCGCAGGACATCCACATGCGCGGGGCCTTCGCCAAGCAGGGCATC GACATCGCCAAGGACGTGGAGTTCGTCAACATCCCGAACCCGTCCGATCATGCTCAGGCGCTGCGCCGCGGCGAAGTCGA CCTGATCTGCTCGGTCGAGCCCTTCGCCACCCAGATTCGCCAAGTGAAAGCGGGCAAGTTCTTCACCTATCCCTACGACC AATCGGCGGGCGAGCTCACCAACCTCATGCTCACCCGGTCTGACGTGATCGTGGCCAACCGCAAGGGCCTGCAATCGACC GTCGGCGCGATCGTCAAGGTCGACGACTTCGTCGCCAAAAACCACGATGCCTGGGTCGGCGTCATCACCAAGGTGACCGG GCTCGACAAGACCATCGCCGAGGGCGCGATCGAGAACCTGAAGCCCGATTACCGGATGTACAAGCCACAGGCTCTGGCGA TCGCGGCGATGATGAAGGAACTGAAGTACATCTCAAAGGACGTCTCGGCCGAAGTGTCCAAGAACATGGACTACAGCTTC CTCCAGGCCGCGTCCGGTCTGTCAGCGGCCGATCTCGGCAACAAGTAG
Upstream 100 bases:
>100_bases GTCGGCCAGACGGCCGATGTGGTCGCTGCGAGCCTTGCCGGCCGAAACAGCCCGACCTCGAGCGCGGCCTGACATCTCAT AGCCGAAGGGGAATACTAGG
Downstream 100 bases:
>100_bases CATCGGGGACGAGGCGCCGTGACCACCCTCATCACCGGCGTCTCCGGCTTCGTGGGCGGCGCGCTTGCCGCCGCTCTCGT CGCCCGGAGCGAGGACGTGA
Product: ABC transporter substrate binding protein
Products: NA
Alternate protein names: NMT1/THI5 Like Domain Protein
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKAVRRWLACLAMIPLMAAAASAQDKPKIKLGFAKCAHCTPLVLTPEYAKDIDLEVVPFNTGNDVLTALVSKSIDVGQIT YLHYATALDKGFDVMAISGQVNGGSQILLSNDLPVEPNDWAGLKTMIAERKAAGKPLKVAASRGNAQDIHMRGAFAKQGI DIAKDVEFVNIPNPSDHAQALRRGEVDLICSVEPFATQIRQVKAGKFFTYPYDQSAGELTNLMLTRSDVIVANRKGLQST VGAIVKVDDFVAKNHDAWVGVITKVTGLDKTIAEGAIENLKPDYRMYKPQALAIAAMMKELKYISKDVSAEVSKNMDYSF LQAASGLSAADLGNK
Sequences:
>Translated_335_residues MKAVRRWLACLAMIPLMAAAASAQDKPKIKLGFAKCAHCTPLVLTPEYAKDIDLEVVPFNTGNDVLTALVSKSIDVGQIT YLHYATALDKGFDVMAISGQVNGGSQILLSNDLPVEPNDWAGLKTMIAERKAAGKPLKVAASRGNAQDIHMRGAFAKQGI DIAKDVEFVNIPNPSDHAQALRRGEVDLICSVEPFATQIRQVKAGKFFTYPYDQSAGELTNLMLTRSDVIVANRKGLQST VGAIVKVDDFVAKNHDAWVGVITKVTGLDKTIAEGAIENLKPDYRMYKPQALAIAAMMKELKYISKDVSAEVSKNMDYSF LQAASGLSAADLGNK >Mature_335_residues MKAVRRWLACLAMIPLMAAAASAQDKPKIKLGFAKCAHCTPLVLTPEYAKDIDLEVVPFNTGNDVLTALVSKSIDVGQIT YLHYATALDKGFDVMAISGQVNGGSQILLSNDLPVEPNDWAGLKTMIAERKAAGKPLKVAASRGNAQDIHMRGAFAKQGI DIAKDVEFVNIPNPSDHAQALRRGEVDLICSVEPFATQIRQVKAGKFFTYPYDQSAGELTNLMLTRSDVIVANRKGLQST VGAIVKVDDFVAKNHDAWVGVITKVTGLDKTIAEGAIENLKPDYRMYKPQALAIAAMMKELKYISKDVSAEVSKNMDYSF LQAASGLSAADLGNK
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36172; Mature: 36172
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVRRWLACLAMIPLMAAAASAQDKPKIKLGFAKCAHCTPLVLTPEYAKDIDLEVVPFN CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCEEEECCCHHCCCCEEEEECC TGNDVLTALVSKSIDVGQITYLHYATALDKGFDVMAISGQVNGGSQILLSNDLPVEPNDW CCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCC AGLKTMIAERKAAGKPLKVAASRGNAQDIHMRGAFAKQGIDIAKDVEFVNIPNPSDHAQA CHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCHHHHCCCCHHHCCEEEECCCCCHHHHH LRRGEVDLICSVEPFATQIRQVKAGKFFTYPYDQSAGELTNLMLTRSDVIVANRKGLQST HHCCCEEEEEECCHHHHHHHHHHCCCEEECCCCCCCHHHHHHEEECCCEEEECCCCHHHH VGAIVKVDDFVAKNHDAWVGVITKVTGLDKTIAEGAIENLKPDYRMYKPQALAIAAMMKE HHHHHEEHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHH LKYISKDVSAEVSKNMDYSFLQAASGLSAADLGNK HHHHHHHHHHHHHCCCCHHHHHHHCCCCHHCCCCC >Mature Secondary Structure MKAVRRWLACLAMIPLMAAAASAQDKPKIKLGFAKCAHCTPLVLTPEYAKDIDLEVVPFN CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCEEEECCCHHCCCCEEEEECC TGNDVLTALVSKSIDVGQITYLHYATALDKGFDVMAISGQVNGGSQILLSNDLPVEPNDW CCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCC AGLKTMIAERKAAGKPLKVAASRGNAQDIHMRGAFAKQGIDIAKDVEFVNIPNPSDHAQA CHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCHHHHCCCCHHHCCEEEECCCCCHHHHH LRRGEVDLICSVEPFATQIRQVKAGKFFTYPYDQSAGELTNLMLTRSDVIVANRKGLQST HHCCCEEEEEECCHHHHHHHHHHCCCEEECCCCCCCHHHHHHEEECCCEEEECCCCHHHH VGAIVKVDDFVAKNHDAWVGVITKVTGLDKTIAEGAIENLKPDYRMYKPQALAIAAMMKE HHHHHEEHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHH LKYISKDVSAEVSKNMDYSFLQAASGLSAADLGNK HHHHHHHHHHHHHCCCCHHHHHHHCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA