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The map label for this gene is yhdX [H]

Identifier: 220914745

GI number: 220914745

Start: 92128

End: 93339

Strand: Reverse

Name: yhdX [H]

Synonym: Mnod_7859

Alternate gene names: 220914745

Gene position: 93339-92128 (Counterclockwise)

Preceding gene: 220914746

Following gene: 220914744

Centisome position: 20.38

GC content: 60.64

Gene sequence:

>1212_bases
ATGTCCGGTGCCGTCCTCGATCCCCGCCTGCATCCTGTCCGGGCAGCGCCCCGCAAGAAACTGAACTTCTCATGGTCTGA
TCCCAGGTTCCGCAACATCGTCTGGCAGGTCGTGATCCTCAGTGCGGTGACGGCGGTCGCATGGTTTCTAATTTCCAATA
CAAATCGTAATCTTGAGCAGCGCCGCATCGCAACCGGGTTCGCGTTTCTTTCCCGCACCGCCGGCATTCCGATCGGAGAG
CATCTGATCGACTATGACCCCGCCGTCAGCACCTACGGGCGCGCGCTGCTGATCGGGGTGCTCAATACCTTGAAAGTGGC
TGTGGTCGGGGTGGTGCTGGCCACGCTCTGGGGCACGCTGCTCGGTATCGCCCGTCTATCGCGGAACTGGCTCGTCTCCA
AGCTAGCTGCGGTCTACGTTGAGATCATCCGTGACGTGCCTCTGCTGCTACAACTCCTATTCTGGTACTCAATTCTGCAG
GCGCTGCCAGCGCCCCGACAGTCCTTCCATCCAGTCCCGGGCGTGTTCCTATCCAACCGTGGCGTGAAGATCCCGTTCGT
TGAGTGGGATGAGCCGTATTGGTGGGCACTGTTGGCACTGACAGTGGGCGCAGTCGGGACGTGGGCGTGGTCGCGCGCCG
CGACACGTCGGCAGGAGCGGATCGGTACCCGTCCGAAGGTCTGGCCGATGGCGATCTTATTGATGGTCGGCTTTCCGGTG
GCAGTCTGGGCGGGACTGGGAGCGCCGTTCGTGGCGGATGTGCCGGAGCTCCGCGGATTCGACTTCAACGGTGGTGGGAC
GATCAGTCCGGAATACGGCGCGCTCACCATGGGGTTAGTGATCTACACGGCGGCTTTCATCGCCGAGATCGTTCGTTCCG
GCATCCTGGCCGTGCCGACGGGCCAATGGGAAGCCGCCGCGGCACTCGGTGTACGGCGCGGCATCATCTTGCGCAAGATC
GTGCTTCCGCAAGCTCTGCGGGTGATCATCCCACCGATGACAAGCCAATATCTGAACCTGATCAAGAACAGCTCGCTCGC
GGTGGCGATCGGCTACCAGGACATCGTTTCCATTGCTAATACGACGCTCAATCAGACTGGGCAGGCCATCGAGGGAATTG
CCATGGTTATGCTGGTCTACCTGGTGATCAGTCTCTCGATTAGCCTATTCATGAATTGGTACAATGGGCGCATCGCGCTC
GTGGAGCGCTGA

Upstream 100 bases:

>100_bases
GCTTGACCGGGGGAGCGCGACAGGGCCGCGCCGGCCTAGCGGAAGGCGCCATTGCCTGCTCGACCTGTCGTAGATCGCCC
CATCCCTTCGTGAGGTGACG

Downstream 100 bases:

>100_bases
GCCATGTCGCAGACCACCACCGCCAAGATTTCGGAAGCTGCCGGCGACCCGGTACCATCAATCGCCGGCATTCCGGCAGC
CCCGATCACGCGCGCCCCAC

Product: polar amino acid ABC transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSGAVLDPRLHPVRAAPRKKLNFSWSDPRFRNIVWQVVILSAVTAVAWFLISNTNRNLEQRRIATGFAFLSRTAGIPIGE
HLIDYDPAVSTYGRALLIGVLNTLKVAVVGVVLATLWGTLLGIARLSRNWLVSKLAAVYVEIIRDVPLLLQLLFWYSILQ
ALPAPRQSFHPVPGVFLSNRGVKIPFVEWDEPYWWALLALTVGAVGTWAWSRAATRRQERIGTRPKVWPMAILLMVGFPV
AVWAGLGAPFVADVPELRGFDFNGGGTISPEYGALTMGLVIYTAAFIAEIVRSGILAVPTGQWEAAAALGVRRGIILRKI
VLPQALRVIIPPMTSQYLNLIKNSSLAVAIGYQDIVSIANTTLNQTGQAIEGIAMVMLVYLVISLSISLFMNWYNGRIAL
VER

Sequences:

>Translated_403_residues
MSGAVLDPRLHPVRAAPRKKLNFSWSDPRFRNIVWQVVILSAVTAVAWFLISNTNRNLEQRRIATGFAFLSRTAGIPIGE
HLIDYDPAVSTYGRALLIGVLNTLKVAVVGVVLATLWGTLLGIARLSRNWLVSKLAAVYVEIIRDVPLLLQLLFWYSILQ
ALPAPRQSFHPVPGVFLSNRGVKIPFVEWDEPYWWALLALTVGAVGTWAWSRAATRRQERIGTRPKVWPMAILLMVGFPV
AVWAGLGAPFVADVPELRGFDFNGGGTISPEYGALTMGLVIYTAAFIAEIVRSGILAVPTGQWEAAAALGVRRGIILRKI
VLPQALRVIIPPMTSQYLNLIKNSSLAVAIGYQDIVSIANTTLNQTGQAIEGIAMVMLVYLVISLSISLFMNWYNGRIAL
VER
>Mature_402_residues
SGAVLDPRLHPVRAAPRKKLNFSWSDPRFRNIVWQVVILSAVTAVAWFLISNTNRNLEQRRIATGFAFLSRTAGIPIGEH
LIDYDPAVSTYGRALLIGVLNTLKVAVVGVVLATLWGTLLGIARLSRNWLVSKLAAVYVEIIRDVPLLLQLLFWYSILQA
LPAPRQSFHPVPGVFLSNRGVKIPFVEWDEPYWWALLALTVGAVGTWAWSRAATRRQERIGTRPKVWPMAILLMVGFPVA
VWAGLGAPFVADVPELRGFDFNGGGTISPEYGALTMGLVIYTAAFIAEIVRSGILAVPTGQWEAAAALGVRRGIILRKIV
LPQALRVIIPPMTSQYLNLIKNSSLAVAIGYQDIVSIANTTLNQTGQAIEGIAMVMLVYLVISLSISLFMNWYNGRIALV
ER

Specific function: Probably part of the binding-protein-dependent transport system ydhWXYZ for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4597

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI48994930, Length=386, Percent_Identity=49.740932642487, Blast_Score=350, Evalue=1e-97,
Organism=Escherichia coli, GI1786874, Length=129, Percent_Identity=40.3100775193798, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1788226, Length=127, Percent_Identity=31.496062992126, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1786873, Length=119, Percent_Identity=35.2941176470588, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI87082239, Length=125, Percent_Identity=31.2, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1787030, Length=130, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1787087, Length=127, Percent_Identity=28.3464566929134, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 44316; Mature: 44185

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGAVLDPRLHPVRAAPRKKLNFSWSDPRFRNIVWQVVILSAVTAVAWFLISNTNRNLEQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RRIATGFAFLSRTAGIPIGEHLIDYDPAVSTYGRALLIGVLNTLKVAVVGVVLATLWGTL
HHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIARLSRNWLVSKLAAVYVEIIRDVPLLLQLLFWYSILQALPAPRQSFHPVPGVFLSNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEECCC
GVKIPFVEWDEPYWWALLALTVGAVGTWAWSRAATRRQERIGTRPKVWPMAILLMVGFPV
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AVWAGLGAPFVADVPELRGFDFNGGGTISPEYGALTMGLVIYTAAFIAEIVRSGILAVPT
HHHHCCCCCHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECC
GQWEAAAALGVRRGIILRKIVLPQALRVIIPPMTSQYLNLIKNSSLAVAIGYQDIVSIAN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECHHHHHHHHH
TTLNQTGQAIEGIAMVMLVYLVISLSISLFMNWYNGRIALVER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure 
SGAVLDPRLHPVRAAPRKKLNFSWSDPRFRNIVWQVVILSAVTAVAWFLISNTNRNLEQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RRIATGFAFLSRTAGIPIGEHLIDYDPAVSTYGRALLIGVLNTLKVAVVGVVLATLWGTL
HHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIARLSRNWLVSKLAAVYVEIIRDVPLLLQLLFWYSILQALPAPRQSFHPVPGVFLSNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEECCC
GVKIPFVEWDEPYWWALLALTVGAVGTWAWSRAATRRQERIGTRPKVWPMAILLMVGFPV
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AVWAGLGAPFVADVPELRGFDFNGGGTISPEYGALTMGLVIYTAAFIAEIVRSGILAVPT
HHHHCCCCCHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECC
GQWEAAAALGVRRGIILRKIVLPQALRVIIPPMTSQYLNLIKNSSLAVAIGYQDIVSIAN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECHHHHHHHHH
TTLNQTGQAIEGIAMVMLVYLVISLSISLFMNWYNGRIALVER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]