| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220914690
Identifier: 220914690
GI number: 220914690
Start: 22867
End: 24117
Strand: Reverse
Name: 220914690
Synonym: Mnod_7797
Alternate gene names: NA
Gene position: 24117-22867 (Counterclockwise)
Preceding gene: 220914692
Following gene: 220914688
Centisome position: 5.26
GC content: 56.35
Gene sequence:
>1251_bases ATGCCGCGACGCTCGAAACCCACGGGTCCGTCAACATCGACCGCTCTCACCCGGGGTGCGAGCGCCACCGAGCCATCGAA GCCGACCCCGATTGAGCAGCCGATCCAATTCGACTTTCTCGCGCAGCAGGACGAGCGGGTCACGAAGATCCTGCGGTTCT GGGACCACGTTCCGTGGGCGGTGCTCTACAAGCACGATGTTATGCGGAGCGGCGCCTATCTGAAGATGGTCACGCGGGCT TTCGACGTCGGCGGGCGTCTTCACCAGTTGCAGATGACCCCGGCGCGTCTAGTGCGGGATGGCCAGGAGTTGGATGACTA TCCGGGAGATCGCGAGCAGCTTATTGAACTTGCTATCCGCAGGCTCGCGGCGATGAAGCGGGAGTTCCGCTTGCATCGGA AGAATGCAAGCAATGTGATCGGTTCGAAAGTTGTAGAAGTCGTTGCTCTTAATTTGGGCATATACGAAATTCAGAATGAG TTGAAACGTAACGGCCATGAGTACAACTACACTCAAATTCTAGAGTCAATCGACATTCTAAACAAAACACATTGCAGCAT CACAGCGTACGACACCGATCAGGACGGCGACGGTGTGGCGCATGTGATGAACGGTCCAATCTTCACACAGGTTTATTTCA CGCGGAACGATAAGGAAGAGAAAAACGCTGCCATGCGGGTTACGATCCACGTGAACTCGCTTGTAGCAGATGCGATCCGC GGGCTCGACTTTTACGATGTGAGCTATGAAGCTCTCATGAAGCTCAAGCCGGTGTCGCGCTGGATCTTCAAGCGCCTGCA TCACGCGATGGTTTTCCCGACGAGCAATGAAGATCCGCGTATTCAGACTATCCGCGCTAGCACTATCCTGGCTTATAGCG GCATGGGCGAATATGCTCGCCTGCGGGATGCTTTGAAACAGATCATGATTTACCTCGACGACCTGAAGCGAAACGGCATT ATCGAGGAGATCATGGCTGAGGACGAATGGGAGGGATCCGGACGCTCGAAGCGCAAAGCGGACGTAAGCTATACGATCCG GATGTCGGAGGAGTTTTACCGGCAGTCGATCCAGGCACAGCAGAGTCGGATCGAAGCACTGACTGACTTCCGCGATATCA CGGGACAGGCCACGCCGGAGGTTTGGACCCCTGCTACGCCGACAGCCCGCTTGGAGGTCGCTAAGAGGCGCACGTCGCGC CGGACCAAGGGTACGAGCGACCTCCCGCTATTCGGCAGCGTTCAGGACTGA
Upstream 100 bases:
>100_bases GCAATAACCCTGAACTGACCCCAAGTTTTTTGCGGCGTGACGCCATTGGCCTTTGACAGGTATTGGGCTGCCGCGTTCAC TGCCACGGCTGGAGGGCTGT
Downstream 100 bases:
>100_bases GGCGACCGGGCTGCGCCAGAGAACTCCCAGGCGCGGGAATCGCCGACCTCGCAGCGGTCGGCAGCCACCGCTTCCATTTC TCGACGGCCACGAGGACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: RepA Protein
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MPRRSKPTGPSTSTALTRGASATEPSKPTPIEQPIQFDFLAQQDERVTKILRFWDHVPWAVLYKHDVMRSGAYLKMVTRA FDVGGRLHQLQMTPARLVRDGQELDDYPGDREQLIELAIRRLAAMKREFRLHRKNASNVIGSKVVEVVALNLGIYEIQNE LKRNGHEYNYTQILESIDILNKTHCSITAYDTDQDGDGVAHVMNGPIFTQVYFTRNDKEEKNAAMRVTIHVNSLVADAIR GLDFYDVSYEALMKLKPVSRWIFKRLHHAMVFPTSNEDPRIQTIRASTILAYSGMGEYARLRDALKQIMIYLDDLKRNGI IEEIMAEDEWEGSGRSKRKADVSYTIRMSEEFYRQSIQAQQSRIEALTDFRDITGQATPEVWTPATPTARLEVAKRRTSR RTKGTSDLPLFGSVQD
Sequences:
>Translated_416_residues MPRRSKPTGPSTSTALTRGASATEPSKPTPIEQPIQFDFLAQQDERVTKILRFWDHVPWAVLYKHDVMRSGAYLKMVTRA FDVGGRLHQLQMTPARLVRDGQELDDYPGDREQLIELAIRRLAAMKREFRLHRKNASNVIGSKVVEVVALNLGIYEIQNE LKRNGHEYNYTQILESIDILNKTHCSITAYDTDQDGDGVAHVMNGPIFTQVYFTRNDKEEKNAAMRVTIHVNSLVADAIR GLDFYDVSYEALMKLKPVSRWIFKRLHHAMVFPTSNEDPRIQTIRASTILAYSGMGEYARLRDALKQIMIYLDDLKRNGI IEEIMAEDEWEGSGRSKRKADVSYTIRMSEEFYRQSIQAQQSRIEALTDFRDITGQATPEVWTPATPTARLEVAKRRTSR RTKGTSDLPLFGSVQD >Mature_415_residues PRRSKPTGPSTSTALTRGASATEPSKPTPIEQPIQFDFLAQQDERVTKILRFWDHVPWAVLYKHDVMRSGAYLKMVTRAF DVGGRLHQLQMTPARLVRDGQELDDYPGDREQLIELAIRRLAAMKREFRLHRKNASNVIGSKVVEVVALNLGIYEIQNEL KRNGHEYNYTQILESIDILNKTHCSITAYDTDQDGDGVAHVMNGPIFTQVYFTRNDKEEKNAAMRVTIHVNSLVADAIRG LDFYDVSYEALMKLKPVSRWIFKRLHHAMVFPTSNEDPRIQTIRASTILAYSGMGEYARLRDALKQIMIYLDDLKRNGII EEIMAEDEWEGSGRSKRKADVSYTIRMSEEFYRQSIQAQQSRIEALTDFRDITGQATPEVWTPATPTARLEVAKRRTSRR TKGTSDLPLFGSVQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47598; Mature: 47467
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRSKPTGPSTSTALTRGASATEPSKPTPIEQPIQFDFLAQQDERVTKILRFWDHVPWA CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCHH VLYKHDVMRSGAYLKMVTRAFDVGGRLHQLQMTPARLVRDGQELDDYPGDREQLIELAIR HHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCHHCCCCCCHHHHHHHHHH RLAAMKREFRLHRKNASNVIGSKVVEVVALNLGIYEIQNELKRNGHEYNYTQILESIDIL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHH NKTHCSITAYDTDQDGDGVAHVMNGPIFTQVYFTRNDKEEKNAAMRVTIHVNSLVADAIR CCCCCEEEEECCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEHHHHHHHHHH GLDFYDVSYEALMKLKPVSRWIFKRLHHAMVFPTSNEDPRIQTIRASTILAYSGMGEYAR CCCEECCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEHHEEEEECCCCHHHH LRDALKQIMIYLDDLKRNGIIEEIMAEDEWEGSGRSKRKADVSYTIRMSEEFYRQSIQAQ HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHH QSRIEALTDFRDITGQATPEVWTPATPTARLEVAKRRTSRRTKGTSDLPLFGSVQD HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PRRSKPTGPSTSTALTRGASATEPSKPTPIEQPIQFDFLAQQDERVTKILRFWDHVPWA CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCHH VLYKHDVMRSGAYLKMVTRAFDVGGRLHQLQMTPARLVRDGQELDDYPGDREQLIELAIR HHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCHHCCCCCCHHHHHHHHHH RLAAMKREFRLHRKNASNVIGSKVVEVVALNLGIYEIQNELKRNGHEYNYTQILESIDIL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHH NKTHCSITAYDTDQDGDGVAHVMNGPIFTQVYFTRNDKEEKNAAMRVTIHVNSLVADAIR CCCCCEEEEECCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEHHHHHHHHHH GLDFYDVSYEALMKLKPVSRWIFKRLHHAMVFPTSNEDPRIQTIRASTILAYSGMGEYAR CCCEECCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEHHEEEEECCCCHHHH LRDALKQIMIYLDDLKRNGIIEEIMAEDEWEGSGRSKRKADVSYTIRMSEEFYRQSIQAQ HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHH QSRIEALTDFRDITGQATPEVWTPATPTARLEVAKRRTSRRTKGTSDLPLFGSVQD HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA