| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220914688
Identifier: 220914688
GI number: 220914688
Start: 21390
End: 22115
Strand: Reverse
Name: 220914688
Synonym: Mnod_7794
Alternate gene names: NA
Gene position: 22115-21390 (Counterclockwise)
Preceding gene: 220914690
Following gene: 220914687
Centisome position: 4.83
GC content: 68.73
Gene sequence:
>726_bases GTGCTGACGTCAATACCTCAGACCAATCGAGCCCGCCACGCCCCCCACCCTACGGCTGCCGCGTTCACGTTTCCACCGGT GCGCGGCCGCAAGCTCACAGCCGCTTTCGATGGTGGTCGCCTGCCCTCCGACGGCGGTGTCCTCCTGCTCGCCCAGGCCA CGCGCCGGCTCGGCATCGCCGACAGGCTCGCCGCCGTAATCCCGGACTGGCGCGACCCACATCGGATCCGCCACCCGCTC ACCGAGATCCTGCTCGCCCGCATCCTGGCCAGCGCCTGCAGTCACGAGAATGCCGACGATCTCGACCATCTGTGCACCGG CGCCGTCTTCAAGCTCGCCTGCGCGCGTCTGCCGGAGAGCGGCCCCGACCTGATGAGCCAGCCCACCGTCTCGCACCTCG AGAACACGCCTTGTCTGCGCGACCTGATCCGGCTCGGGCGCGTGCTGGTCGATTTCTTCTGCGTTAGCTCCCCCGAGCCG CCGACCGCCATCACCCTGGACATCGACGACACGCTCGACGTGGTCCATGGCCACCAGCAGCTCTCGTTGTTCAACGCCCA TCACGACGAGCGCTGCTTTTTGCCCATCCACGTCTACGACCCTGTCACCGGGCGCGCCGTCGCGGTGATCCTGCGGCCCG GCAAGACGCCGTCAGGGCGGGAAGTCCGCGGGCATCTGCGCAGGCTGGTGCGGGCCATCCGCCGGCATTGCACGCCGAGA ACCTGA
Upstream 100 bases:
>100_bases TCAACGTGATCGGGCGCCACTCTAGCCCGTCTTATTTCCGACAGCCGTGTCCTGAGGGCGGCGAGCGTGGCGTAAAGCCT TGATGTGGCTTAAGGATTGG
Downstream 100 bases:
>100_bases TCAAGCTGCACAAGACGCAGCTCGCGTCCGACCGCACCTCCTGCCAGAGTGCGACTGCCAACCCAATGCGGCTGGTGCTG CACACGGCTGCGCGCTGGCT
Product: transposase IS4 family protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase Family Protein; Transposase Is4 Family Protein; Transposase For Insertion Sequence NGRIS-20g; Transposase Is4-Like Protein
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MLTSIPQTNRARHAPHPTAAAFTFPPVRGRKLTAAFDGGRLPSDGGVLLLAQATRRLGIADRLAAVIPDWRDPHRIRHPL TEILLARILASACSHENADDLDHLCTGAVFKLACARLPESGPDLMSQPTVSHLENTPCLRDLIRLGRVLVDFFCVSSPEP PTAITLDIDDTLDVVHGHQQLSLFNAHHDERCFLPIHVYDPVTGRAVAVILRPGKTPSGREVRGHLRRLVRAIRRHCTPR T
Sequences:
>Translated_241_residues MLTSIPQTNRARHAPHPTAAAFTFPPVRGRKLTAAFDGGRLPSDGGVLLLAQATRRLGIADRLAAVIPDWRDPHRIRHPL TEILLARILASACSHENADDLDHLCTGAVFKLACARLPESGPDLMSQPTVSHLENTPCLRDLIRLGRVLVDFFCVSSPEP PTAITLDIDDTLDVVHGHQQLSLFNAHHDERCFLPIHVYDPVTGRAVAVILRPGKTPSGREVRGHLRRLVRAIRRHCTPR T >Mature_241_residues MLTSIPQTNRARHAPHPTAAAFTFPPVRGRKLTAAFDGGRLPSDGGVLLLAQATRRLGIADRLAAVIPDWRDPHRIRHPL TEILLARILASACSHENADDLDHLCTGAVFKLACARLPESGPDLMSQPTVSHLENTPCLRDLIRLGRVLVDFFCVSSPEP PTAITLDIDDTLDVVHGHQQLSLFNAHHDERCFLPIHVYDPVTGRAVAVILRPGKTPSGREVRGHLRRLVRAIRRHCTPR T
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26568; Mature: 26568
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSIPQTNRARHAPHPTAAAFTFPPVRGRKLTAAFDGGRLPSDGGVLLLAQATRRLGIA CCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCEEEEEHHHHHHCHH DRLAAVIPDWRDPHRIRHPLTEILLARILASACSHENADDLDHLCTGAVFKLACARLPES HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC GPDLMSQPTVSHLENTPCLRDLIRLGRVLVDFFCVSSPEPPTAITLDIDDTLDVVHGHQQ CCCHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCHHH LSLFNAHHDERCFLPIHVYDPVTGRAVAVILRPGKTPSGREVRGHLRRLVRAIRRHCTPR HHHHHCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC T C >Mature Secondary Structure MLTSIPQTNRARHAPHPTAAAFTFPPVRGRKLTAAFDGGRLPSDGGVLLLAQATRRLGIA CCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCEEEEEHHHHHHCHH DRLAAVIPDWRDPHRIRHPLTEILLARILASACSHENADDLDHLCTGAVFKLACARLPES HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC GPDLMSQPTVSHLENTPCLRDLIRLGRVLVDFFCVSSPEPPTAITLDIDDTLDVVHGHQQ CCCHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCHHH LSLFNAHHDERCFLPIHVYDPVTGRAVAVILRPGKTPSGREVRGHLRRLVRAIRRHCTPR HHHHHCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA