Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220905618

Identifier: 220905618

GI number: 220905618

Start: 2838186

End: 2839301

Strand: Reverse

Name: 220905618

Synonym: Ddes_2358

Alternate gene names: NA

Gene position: 2839301-2838186 (Counterclockwise)

Preceding gene: 220905619

Following gene: 220905616

Centisome position: 98.81

GC content: 47.4

Gene sequence:

>1116_bases
ATGGCAACCCAGTATCACTATAACCAATTTCCGCCCGTTACCCTAGAATGGGATAAGCTTATTCCTTTGCTTGGGCCTAC
CCGCGCAGCTGTTGCCCATTATGATGGTGTCCTCAGTGCTGTGCCCAATGCCGATGTGTTGCTCTCCCCTCTGACCACAC
AAGAGGCGGTGCTTTCATCGCGTATTGAGGGTACGCAAGCTACAATGGGCGAAGTGTTGGAGTATGAAGCAGCTGGCGAT
ACGGGCAAATATGATGAGAATCGTAAAGCAGACATCTTTGAGGTTCTCAATTATCGTAGTGCCATGCGTGAGGCCGAAAA
ACTTCTTAAGGAACTCCCCTTGTCTCAAAGGGTTATTAAGAATGTCCATGAGGTATTGCTTTCGGGGGTACGAGGTCAAA
ACAAATCGCCGGGTGAATACCGAAGAATTCCAAACTGGATCGGTCCGCAAGGATGCACTATCGAAACTGCGTATTTTGTT
CCTATTAGTGCCGAAAAACTTCCAGACGGCATAAATGCATGGGAAAAATTTATTCATGCCGACTACTTGGATAGTTTGGT
TCAGCTAGCCTTGTTGCATGTTGAATTTGAAGCATTGCATCCTTTTCTTGATGGCAATGGCCGCCTTGGGCGTATGCTTG
TACCGCTGTTTATGTGGCAAAAGCAGATAATCTCTCGCCCAACATTTTATATCAGTGCCGTATTCGAAAGTGATAGAGAG
GCTTACTATACGCATCTTCGCGCCGTCTCCCAGAATGGCGCATGGACAGAGTGGTGTATTTTTTTCTTGCAAGCCTTACA
AACGCAAGCAGACGAAAATACACGTAAGGCAAAAGGTATCCTTGAGCTCTACGAAAAAATGAAGCACGCCATTCCTGCGT
TACTCAACTCACAACATGTTATTCAAGCTGTGGATTGGATTTTTAATGTGCCTATTTTCTCCGGTTCAACATTTGTCCGT
GAAGCAGGAATTCCAGAAGCCACGGCCCGCCGCATCTTACCTCTGCTTGCGGAGGCAAGCATTCTCAAAATTATTGCGCC
CGCCAGTGGTCGGCGTGCGGCAGTATACAGTTTTCCGGCCCTGCTCAATCTTGCTGAGGGTCGCCAGTGTTTTTAG

Upstream 100 bases:

>100_bases
GTTCTTGCTCAGATCGCTCAAGCGCCTTACAGTAATCAGGTACCCTTCAAGTGCCACAACGCCACCAAGCCCAAAGTGAT
TGCCCTCCCAAGGAGCAGAC

Downstream 100 bases:

>100_bases
TACCAGTCGAGATTTGTAGCGCACAAATGCGCGGCAAAGGTTTTTGTTGCGCATTTTTTTGATTTTTTGCGCAACAAAAA
CCTTTGCCGCGCATTTGTGC

Product: filamentation induced by cAMP protein Fic

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MATQYHYNQFPPVTLEWDKLIPLLGPTRAAVAHYDGVLSAVPNADVLLSPLTTQEAVLSSRIEGTQATMGEVLEYEAAGD
TGKYDENRKADIFEVLNYRSAMREAEKLLKELPLSQRVIKNVHEVLLSGVRGQNKSPGEYRRIPNWIGPQGCTIETAYFV
PISAEKLPDGINAWEKFIHADYLDSLVQLALLHVEFEALHPFLDGNGRLGRMLVPLFMWQKQIISRPTFYISAVFESDRE
AYYTHLRAVSQNGAWTEWCIFFLQALQTQADENTRKAKGILELYEKMKHAIPALLNSQHVIQAVDWIFNVPIFSGSTFVR
EAGIPEATARRILPLLAEASILKIIAPASGRRAAVYSFPALLNLAEGRQCF

Sequences:

>Translated_371_residues
MATQYHYNQFPPVTLEWDKLIPLLGPTRAAVAHYDGVLSAVPNADVLLSPLTTQEAVLSSRIEGTQATMGEVLEYEAAGD
TGKYDENRKADIFEVLNYRSAMREAEKLLKELPLSQRVIKNVHEVLLSGVRGQNKSPGEYRRIPNWIGPQGCTIETAYFV
PISAEKLPDGINAWEKFIHADYLDSLVQLALLHVEFEALHPFLDGNGRLGRMLVPLFMWQKQIISRPTFYISAVFESDRE
AYYTHLRAVSQNGAWTEWCIFFLQALQTQADENTRKAKGILELYEKMKHAIPALLNSQHVIQAVDWIFNVPIFSGSTFVR
EAGIPEATARRILPLLAEASILKIIAPASGRRAAVYSFPALLNLAEGRQCF
>Mature_370_residues
ATQYHYNQFPPVTLEWDKLIPLLGPTRAAVAHYDGVLSAVPNADVLLSPLTTQEAVLSSRIEGTQATMGEVLEYEAAGDT
GKYDENRKADIFEVLNYRSAMREAEKLLKELPLSQRVIKNVHEVLLSGVRGQNKSPGEYRRIPNWIGPQGCTIETAYFVP
ISAEKLPDGINAWEKFIHADYLDSLVQLALLHVEFEALHPFLDGNGRLGRMLVPLFMWQKQIISRPTFYISAVFESDREA
YYTHLRAVSQNGAWTEWCIFFLQALQTQADENTRKAKGILELYEKMKHAIPALLNSQHVIQAVDWIFNVPIFSGSTFVRE
AGIPEATARRILPLLAEASILKIIAPASGRRAAVYSFPALLNLAEGRQCF

Specific function: Unknown

COG id: COG3177

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fido domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003812 [H]

Pfam domain/function: PF02661 Fic [H]

EC number: NA

Molecular weight: Translated: 41671; Mature: 41540

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQYHYNQFPPVTLEWDKLIPLLGPTRAAVAHYDGVLSAVPNADVLLSPLTTQEAVLSS
CCCCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHH
RIEGTQATMGEVLEYEAAGDTGKYDENRKADIFEVLNYRSAMREAEKLLKELPLSQRVIK
HCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NVHEVLLSGVRGQNKSPGEYRRIPNWIGPQGCTIETAYFVPISAEKLPDGINAWEKFIHA
HHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEECHHHCCCHHHHHHHHHHH
DYLDSLVQLALLHVEFEALHPFLDGNGRLGRMLVPLFMWQKQIISRPTFYISAVFESDRE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCHH
AYYTHLRAVSQNGAWTEWCIFFLQALQTQADENTRKAKGILELYEKMKHAIPALLNSQHV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IQAVDWIFNVPIFSGSTFVREAGIPEATARRILPLLAEASILKIIAPASGRRAAVYSFPA
HHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEHHHH
LLNLAEGRQCF
HHHHCCCCCCC
>Mature Secondary Structure 
ATQYHYNQFPPVTLEWDKLIPLLGPTRAAVAHYDGVLSAVPNADVLLSPLTTQEAVLSS
CCCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHH
RIEGTQATMGEVLEYEAAGDTGKYDENRKADIFEVLNYRSAMREAEKLLKELPLSQRVIK
HCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NVHEVLLSGVRGQNKSPGEYRRIPNWIGPQGCTIETAYFVPISAEKLPDGINAWEKFIHA
HHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEECHHHCCCHHHHHHHHHHH
DYLDSLVQLALLHVEFEALHPFLDGNGRLGRMLVPLFMWQKQIISRPTFYISAVFESDRE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCHH
AYYTHLRAVSQNGAWTEWCIFFLQALQTQADENTRKAKGILELYEKMKHAIPALLNSQHV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IQAVDWIFNVPIFSGSTFVREAGIPEATARRILPLLAEASILKIIAPASGRRAAVYSFPA
HHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEHHHH
LLNLAEGRQCF
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]