| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905618
Identifier: 220905618
GI number: 220905618
Start: 2838186
End: 2839301
Strand: Reverse
Name: 220905618
Synonym: Ddes_2358
Alternate gene names: NA
Gene position: 2839301-2838186 (Counterclockwise)
Preceding gene: 220905619
Following gene: 220905616
Centisome position: 98.81
GC content: 47.4
Gene sequence:
>1116_bases ATGGCAACCCAGTATCACTATAACCAATTTCCGCCCGTTACCCTAGAATGGGATAAGCTTATTCCTTTGCTTGGGCCTAC CCGCGCAGCTGTTGCCCATTATGATGGTGTCCTCAGTGCTGTGCCCAATGCCGATGTGTTGCTCTCCCCTCTGACCACAC AAGAGGCGGTGCTTTCATCGCGTATTGAGGGTACGCAAGCTACAATGGGCGAAGTGTTGGAGTATGAAGCAGCTGGCGAT ACGGGCAAATATGATGAGAATCGTAAAGCAGACATCTTTGAGGTTCTCAATTATCGTAGTGCCATGCGTGAGGCCGAAAA ACTTCTTAAGGAACTCCCCTTGTCTCAAAGGGTTATTAAGAATGTCCATGAGGTATTGCTTTCGGGGGTACGAGGTCAAA ACAAATCGCCGGGTGAATACCGAAGAATTCCAAACTGGATCGGTCCGCAAGGATGCACTATCGAAACTGCGTATTTTGTT CCTATTAGTGCCGAAAAACTTCCAGACGGCATAAATGCATGGGAAAAATTTATTCATGCCGACTACTTGGATAGTTTGGT TCAGCTAGCCTTGTTGCATGTTGAATTTGAAGCATTGCATCCTTTTCTTGATGGCAATGGCCGCCTTGGGCGTATGCTTG TACCGCTGTTTATGTGGCAAAAGCAGATAATCTCTCGCCCAACATTTTATATCAGTGCCGTATTCGAAAGTGATAGAGAG GCTTACTATACGCATCTTCGCGCCGTCTCCCAGAATGGCGCATGGACAGAGTGGTGTATTTTTTTCTTGCAAGCCTTACA AACGCAAGCAGACGAAAATACACGTAAGGCAAAAGGTATCCTTGAGCTCTACGAAAAAATGAAGCACGCCATTCCTGCGT TACTCAACTCACAACATGTTATTCAAGCTGTGGATTGGATTTTTAATGTGCCTATTTTCTCCGGTTCAACATTTGTCCGT GAAGCAGGAATTCCAGAAGCCACGGCCCGCCGCATCTTACCTCTGCTTGCGGAGGCAAGCATTCTCAAAATTATTGCGCC CGCCAGTGGTCGGCGTGCGGCAGTATACAGTTTTCCGGCCCTGCTCAATCTTGCTGAGGGTCGCCAGTGTTTTTAG
Upstream 100 bases:
>100_bases GTTCTTGCTCAGATCGCTCAAGCGCCTTACAGTAATCAGGTACCCTTCAAGTGCCACAACGCCACCAAGCCCAAAGTGAT TGCCCTCCCAAGGAGCAGAC
Downstream 100 bases:
>100_bases TACCAGTCGAGATTTGTAGCGCACAAATGCGCGGCAAAGGTTTTTGTTGCGCATTTTTTTGATTTTTTGCGCAACAAAAA CCTTTGCCGCGCATTTGTGC
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MATQYHYNQFPPVTLEWDKLIPLLGPTRAAVAHYDGVLSAVPNADVLLSPLTTQEAVLSSRIEGTQATMGEVLEYEAAGD TGKYDENRKADIFEVLNYRSAMREAEKLLKELPLSQRVIKNVHEVLLSGVRGQNKSPGEYRRIPNWIGPQGCTIETAYFV PISAEKLPDGINAWEKFIHADYLDSLVQLALLHVEFEALHPFLDGNGRLGRMLVPLFMWQKQIISRPTFYISAVFESDRE AYYTHLRAVSQNGAWTEWCIFFLQALQTQADENTRKAKGILELYEKMKHAIPALLNSQHVIQAVDWIFNVPIFSGSTFVR EAGIPEATARRILPLLAEASILKIIAPASGRRAAVYSFPALLNLAEGRQCF
Sequences:
>Translated_371_residues MATQYHYNQFPPVTLEWDKLIPLLGPTRAAVAHYDGVLSAVPNADVLLSPLTTQEAVLSSRIEGTQATMGEVLEYEAAGD TGKYDENRKADIFEVLNYRSAMREAEKLLKELPLSQRVIKNVHEVLLSGVRGQNKSPGEYRRIPNWIGPQGCTIETAYFV PISAEKLPDGINAWEKFIHADYLDSLVQLALLHVEFEALHPFLDGNGRLGRMLVPLFMWQKQIISRPTFYISAVFESDRE AYYTHLRAVSQNGAWTEWCIFFLQALQTQADENTRKAKGILELYEKMKHAIPALLNSQHVIQAVDWIFNVPIFSGSTFVR EAGIPEATARRILPLLAEASILKIIAPASGRRAAVYSFPALLNLAEGRQCF >Mature_370_residues ATQYHYNQFPPVTLEWDKLIPLLGPTRAAVAHYDGVLSAVPNADVLLSPLTTQEAVLSSRIEGTQATMGEVLEYEAAGDT GKYDENRKADIFEVLNYRSAMREAEKLLKELPLSQRVIKNVHEVLLSGVRGQNKSPGEYRRIPNWIGPQGCTIETAYFVP ISAEKLPDGINAWEKFIHADYLDSLVQLALLHVEFEALHPFLDGNGRLGRMLVPLFMWQKQIISRPTFYISAVFESDREA YYTHLRAVSQNGAWTEWCIFFLQALQTQADENTRKAKGILELYEKMKHAIPALLNSQHVIQAVDWIFNVPIFSGSTFVRE AGIPEATARRILPLLAEASILKIIAPASGRRAAVYSFPALLNLAEGRQCF
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 41671; Mature: 41540
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQYHYNQFPPVTLEWDKLIPLLGPTRAAVAHYDGVLSAVPNADVLLSPLTTQEAVLSS CCCCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHH RIEGTQATMGEVLEYEAAGDTGKYDENRKADIFEVLNYRSAMREAEKLLKELPLSQRVIK HCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH NVHEVLLSGVRGQNKSPGEYRRIPNWIGPQGCTIETAYFVPISAEKLPDGINAWEKFIHA HHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEECHHHCCCHHHHHHHHHHH DYLDSLVQLALLHVEFEALHPFLDGNGRLGRMLVPLFMWQKQIISRPTFYISAVFESDRE HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCHH AYYTHLRAVSQNGAWTEWCIFFLQALQTQADENTRKAKGILELYEKMKHAIPALLNSQHV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH IQAVDWIFNVPIFSGSTFVREAGIPEATARRILPLLAEASILKIIAPASGRRAAVYSFPA HHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEHHHH LLNLAEGRQCF HHHHCCCCCCC >Mature Secondary Structure ATQYHYNQFPPVTLEWDKLIPLLGPTRAAVAHYDGVLSAVPNADVLLSPLTTQEAVLSS CCCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHH RIEGTQATMGEVLEYEAAGDTGKYDENRKADIFEVLNYRSAMREAEKLLKELPLSQRVIK HCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH NVHEVLLSGVRGQNKSPGEYRRIPNWIGPQGCTIETAYFVPISAEKLPDGINAWEKFIHA HHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEECHHHCCCHHHHHHHHHHH DYLDSLVQLALLHVEFEALHPFLDGNGRLGRMLVPLFMWQKQIISRPTFYISAVFESDRE HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCHH AYYTHLRAVSQNGAWTEWCIFFLQALQTQADENTRKAKGILELYEKMKHAIPALLNSQHV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH IQAVDWIFNVPIFSGSTFVREAGIPEATARRILPLLAEASILKIIAPASGRRAAVYSFPA HHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEHHHH LLNLAEGRQCF HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]