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The map label for this gene is ycjC [C]

Identifier: 220905587

GI number: 220905587

Start: 2800383

End: 2800952

Strand: Direct

Name: ycjC [C]

Synonym: Ddes_2327

Alternate gene names: 220905587

Gene position: 2800383-2800952 (Clockwise)

Preceding gene: 220905585

Following gene: 220905588

Centisome position: 97.46

GC content: 59.12

Gene sequence:

>570_bases
ATGCCCGCTGCCCGTACCATCGGTTCGCGTATCCGTGCCTTTCGCGAAGAGCGCGAGGTCGACCTCGAAACCCTGGCCCA
GAATACCGGCCTGGACCAGTGCTACCTGCAAAAGCTTGAAAGCGACACCATCTATCCGAGCATCGGTCCCCTGCAAAAGG
TGGCCCGCGCCCTTGGCGTGCGCCTGGGGACATTTCTGGACGACCAGTTCACCCGCGACCCCATCATGGGCTGCATCCAC
AATTCATGCGAAGGTGAAGAAGCCCTGCACACAGGCCGCATCCCGCGGCCGAGCTATACCTACCAGCCTCTGGGCAAGGG
CAAGAACGACCGCAACATGGAGCCGTTCCACATCCGCATTTTCCCCGACAGCGGCGAACGCAAAACCAGTTCGCATCAGG
GCGAAGAATTCATTCTGGTGCTCAAGGGGGAACTGCTGGTTGTTTACGGGCGTGAAAACCACGTGCTCAAGCCCGGCGAA
ACCATCTATTATAATTCCATCGTTCCTCATTATGTAGGCGCGGCGGGCGATGAGCCGGTGGAAATTCTGGCCGTGGCCTA
CAACCCCTAG

Upstream 100 bases:

>100_bases
CCCCCAGGCCAGGCGGAATACCGCTTTTTTTCACTGCACCATCAAAAAACGCCCGGACGGCGCGTCACCGTTGCGCCGGG
CTTACAGCCAGGAGCCTGCC

Downstream 100 bases:

>100_bases
GCAGCCGCACGGCCAACGTGCGGCTCTCGGGCGCCCCGGGAGCGAAACAGGCCCACCGCCGTATCATGTGAAAAGCGCCT
ACCGCTGCCCGGCCGCAGAC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Regulatory Protein; MerR Family Transcriptional Regulator; Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; HTH-Type Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcription Regulator; Transcriptional Regulator MerR Family; Cupin 2 Conserved Barrel Domain-Containing Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator Cro/CI Family; Transcriptional Regulator-Like Protein; Cupin Domain Protein; Epoxidase; Helix-Turn-Helix/Cupin Domain Protein; Cupin 2 Barrel Domain-Containing Protein; Transcriptional Regulator Merr Family; Helix-Turn-Helix Transcriptional Regulator; Helix-Turn-Helix Family Protein; Cupin Sensor Transcriptional Regulator; Transcriptional Regulator HTH_3 Family; Helix-Turn-Helix Protein; Transcriptional Regulator Xre Family; XRE Family-Like Protein; Transcriptional Regulator XRE Family With Cupin Sensor; Phosphate Butyryltransferase; Cupin Domain-Containing Protein; Phosphotransbutyrylase

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MPAARTIGSRIRAFREEREVDLETLAQNTGLDQCYLQKLESDTIYPSIGPLQKVARALGVRLGTFLDDQFTRDPIMGCIH
NSCEGEEALHTGRIPRPSYTYQPLGKGKNDRNMEPFHIRIFPDSGERKTSSHQGEEFILVLKGELLVVYGRENHVLKPGE
TIYYNSIVPHYVGAAGDEPVEILAVAYNP

Sequences:

>Translated_189_residues
MPAARTIGSRIRAFREEREVDLETLAQNTGLDQCYLQKLESDTIYPSIGPLQKVARALGVRLGTFLDDQFTRDPIMGCIH
NSCEGEEALHTGRIPRPSYTYQPLGKGKNDRNMEPFHIRIFPDSGERKTSSHQGEEFILVLKGELLVVYGRENHVLKPGE
TIYYNSIVPHYVGAAGDEPVEILAVAYNP
>Mature_188_residues
PAARTIGSRIRAFREEREVDLETLAQNTGLDQCYLQKLESDTIYPSIGPLQKVARALGVRLGTFLDDQFTRDPIMGCIHN
SCEGEEALHTGRIPRPSYTYQPLGKGKNDRNMEPFHIRIFPDSGERKTSSHQGEEFILVLKGELLVVYGRENHVLKPGET
IYYNSIVPHYVGAAGDEPVEILAVAYNP

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21200; Mature: 21069

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAARTIGSRIRAFREEREVDLETLAQNTGLDQCYLQKLESDTIYPSIGPLQKVARALGV
CCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH
RLGTFLDDQFTRDPIMGCIHNSCEGEEALHTGRIPRPSYTYQPLGKGKNDRNMEPFHIRI
HHHHHHCCHHCCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
FPDSGERKTSSHQGEEFILVLKGELLVVYGRENHVLKPGETIYYNSIVPHYVGAAGDEPV
ECCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEECCCCEEEECCCCHHHHCCCCCCCE
EILAVAYNP
EEEEEEECC
>Mature Secondary Structure 
PAARTIGSRIRAFREEREVDLETLAQNTGLDQCYLQKLESDTIYPSIGPLQKVARALGV
CCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH
RLGTFLDDQFTRDPIMGCIHNSCEGEEALHTGRIPRPSYTYQPLGKGKNDRNMEPFHIRI
HHHHHHCCHHCCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
FPDSGERKTSSHQGEEFILVLKGELLVVYGRENHVLKPGETIYYNSIVPHYVGAAGDEPV
ECCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEECCCCEEEECCCCHHHHCCCCCCCE
EILAVAYNP
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA