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The map label for this gene is fliC [C]

Identifier: 220905543

GI number: 220905543

Start: 2747091

End: 2747978

Strand: Direct

Name: fliC [C]

Synonym: Ddes_2282

Alternate gene names: 220905543

Gene position: 2747091-2747978 (Clockwise)

Preceding gene: 220905540

Following gene: 220905545

Centisome position: 95.6

GC content: 60.14

Gene sequence:

>888_bases
ATGTATATCAATCACAACCAGATGGCCACCCAGGTGGCCAACACGCTGACATCGCACTACGGCAATCTGTCGTCCTCGGT
GCAGCGCTTGTCCACGGGCCTGCGCATCAACTCCGCGGCCGACGACGCCGCCGGCCTCGCCATCCGCGAACTGATGCGTA
CCGACATCGCCGCCCTGCAGCAGGGTGTCCGCAACGCCAACGACGCCATTTCCCTCATCCAGACCGCCGACGGCGCTCTG
GCCGTTATTGACGAAAAGCTCATACGCATGAAGGAACTGGCCGAACAGGCAGCCACCGGCACCTATGACTCCACACAGCG
CCTGATGATCGAATCGGAGTACCAGGCCATGGCTTCGGAAATTACCCGAATCGCCAATGCCACGGACTTCAACGGCATTC
ATCTGCTGAACGGCAACCTGTCGAGCGATACGCACAACGGCAGCGATCTGACCGCCACCGGCAAGATGAAGATTCACTTC
GGCAGCATGAACGACTCGGCTGAAGACTATTACTACATCCAGATCGGCACGAGCACCGCCTCTGCCCTGGGTGTGGGCAA
TCAGGCCGACAAGACATCTGCCGCCTACACGGTTTCCACGCAGGAAGCCGCGCAGAAGGCCCTTGTGGGCCTGAACGACG
CCGTGGTCTCCAAGGACAAGATCCGCGCTCACCTTGGCGCGTTGCAGAACAGGCTGGAAAACACCATTTCCAACCTGACC
ACCCAGACGCAGAACCTGCAGGCTGCCGAATCCCGCATTTCCGACGTGGACGTGGCCACGGAAATGACGGCGTTCGTACG
CAACCAGATCCTCACCCAGTCCGCTGTGGCCATGCTTTCGCAGGCCAACAGCATGCCCCAGATGGCTATGCAGCTTATCG
GCCGCTAA

Upstream 100 bases:

>100_bases
TCATCCGTTCGTCAGTACGAACACTGTGCGGCGACAGCCCGCAAGGAAGCGGGCGCGCGCAAGCATCGCCGGGCATGCAG
AACATTCAGGGAGGAATGTC

Downstream 100 bases:

>100_bases
ATCGCCACCAGGCAACTGGTTGAGGGCGTGCCACAGCACGCACACCAAATATCCCCGGAGGAAACCCTCCGGGGATATTT
ATTTCGGGACATGCCCAGGC

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: Class B [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MYINHNQMATQVANTLTSHYGNLSSSVQRLSTGLRINSAADDAAGLAIRELMRTDIAALQQGVRNANDAISLIQTADGAL
AVIDEKLIRMKELAEQAATGTYDSTQRLMIESEYQAMASEITRIANATDFNGIHLLNGNLSSDTHNGSDLTATGKMKIHF
GSMNDSAEDYYYIQIGTSTASALGVGNQADKTSAAYTVSTQEAAQKALVGLNDAVVSKDKIRAHLGALQNRLENTISNLT
TQTQNLQAAESRISDVDVATEMTAFVRNQILTQSAVAMLSQANSMPQMAMQLIGR

Sequences:

>Translated_295_residues
MYINHNQMATQVANTLTSHYGNLSSSVQRLSTGLRINSAADDAAGLAIRELMRTDIAALQQGVRNANDAISLIQTADGAL
AVIDEKLIRMKELAEQAATGTYDSTQRLMIESEYQAMASEITRIANATDFNGIHLLNGNLSSDTHNGSDLTATGKMKIHF
GSMNDSAEDYYYIQIGTSTASALGVGNQADKTSAAYTVSTQEAAQKALVGLNDAVVSKDKIRAHLGALQNRLENTISNLT
TQTQNLQAAESRISDVDVATEMTAFVRNQILTQSAVAMLSQANSMPQMAMQLIGR
>Mature_295_residues
MYINHNQMATQVANTLTSHYGNLSSSVQRLSTGLRINSAADDAAGLAIRELMRTDIAALQQGVRNANDAISLIQTADGAL
AVIDEKLIRMKELAEQAATGTYDSTQRLMIESEYQAMASEITRIANATDFNGIHLLNGNLSSDTHNGSDLTATGKMKIHF
GSMNDSAEDYYYIQIGTSTASALGVGNQADKTSAAYTVSTQEAAQKALVGLNDAVVSKDKIRAHLGALQNRLENTISNLT
TQTQNLQAAESRISDVDVATEMTAFVRNQILTQSAVAMLSQANSMPQMAMQLIGR

Specific function: Component of the core of the flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=160, Percent_Identity=41.25, Blast_Score=111, Evalue=5e-26,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 31623; Mature: 31623

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYINHNQMATQVANTLTSHYGNLSSSVQRLSTGLRINSAADDAAGLAIRELMRTDIAALQ
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHH
QGVRNANDAISLIQTADGALAVIDEKLIRMKELAEQAATGTYDSTQRLMIESEYQAMASE
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ITRIANATDFNGIHLLNGNLSSDTHNGSDLTATGKMKIHFGSMNDSAEDYYYIQIGTSTA
HHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEECEEEEEECCCCCCCCCEEEEEEECCCH
SALGVGNQADKTSAAYTVSTQEAAQKALVGLNDAVVSKDKIRAHLGALQNRLENTISNLT
HHHCCCCCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQTQNLQAAESRISDVDVATEMTAFVRNQILTQSAVAMLSQANSMPQMAMQLIGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MYINHNQMATQVANTLTSHYGNLSSSVQRLSTGLRINSAADDAAGLAIRELMRTDIAALQ
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHH
QGVRNANDAISLIQTADGALAVIDEKLIRMKELAEQAATGTYDSTQRLMIESEYQAMASE
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ITRIANATDFNGIHLLNGNLSSDTHNGSDLTATGKMKIHFGSMNDSAEDYYYIQIGTSTA
HHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEECEEEEEECCCCCCCCCEEEEEEECCCH
SALGVGNQADKTSAAYTVSTQEAAQKALVGLNDAVVSKDKIRAHLGALQNRLENTISNLT
HHHCCCCCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQTQNLQAAESRISDVDVATEMTAFVRNQILTQSAVAMLSQANSMPQMAMQLIGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3045083 [H]