| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is sfsA [H]
Identifier: 220905507
GI number: 220905507
Start: 2706253
End: 2707059
Strand: Direct
Name: sfsA [H]
Synonym: Ddes_2246
Alternate gene names: 220905507
Gene position: 2706253-2707059 (Clockwise)
Preceding gene: 220905505
Following gene: 220905512
Centisome position: 94.18
GC content: 63.82
Gene sequence:
>807_bases ATGCCCAAGCAGATTCCCCACACGGCACACCAGCCCCTGCTGCCCATGCCGCAGGGCTGCGTGATCGGCAGCTTTGTGCA GCGGCGCAAGCGCTTCAGCGTAGAACTGCGCGTCAACGGCGGGGAGCTGTGGGTACACAGCAATAATTCCGGCAGCATGC TGGGCCTCACCCGGCCGGGCAATCCCGTTCTTGCTTCCCCGGCGGCCAATCCTGCCCGCAAGCTCAAATATACGCAGGAG TGCGTATGGCTGCCCCAGACGGCAACGCCCGCCGCCCCTGATGCCCCTGCCGGCGCCGATCCATACGCCAGACCCGGCTT TTGGGTAGGTGTAAACACCAATATGCCCAACCGCATGCTTGAGGCCGCCTTTCATGCCGGACGCCTTGCCTTTGCGCAAG GCTACACCAGCCTTGTCCGCGAGGCCAGACGCGGGCAAAGCCGCCTGGACGGATTGCTCACAGGTCCCGGCCTGCCGCCC CTGTGGGTGGAATGTAAAAACGTCACCATGATGGAAGACGACGCCGCCTGCTTTCCTGACGCGGCCAGCGAACGCGGACA AAAACATCTGCGCGAGCTGATGGACATTGTGGCCCAGGGCGAACGGGCCGCCATGCTGTACCTTGTGCAGCGCCCGGACG GCAGCTGTTTTGCCCCGGCGGACTTTATCGACCCGGAATACGCGCGCCTTTTTTACGCCGCGCTAGCCTGCGGGGTGGAA ATATACCCGTACCGTGCTCTTGTGGATGTAGCGGGCATAGACCTCGGCCCGCTCATTCCCCTGCGCCCTGCGCCGCAAAA CGGCTAA
Upstream 100 bases:
>100_bases ACAGACCCGTCAGGCACAGCAAAAAAAAACCTGCGGCCTACAAACAGACCAGGCGGCGCAAGATGCCCCTGCCCACACCG AGGCCCCGGCCGCCGCAAAC
Downstream 100 bases:
>100_bases ACGCGGACCATAAAAAAGGTCCCCTGGGGACCTTTTGAGATTATTATAATTTGAAAAACCTAAATGCCCCGACGCGGCAC AAGAGTGTAACGCGCCGCAT
Product: sugar fermentation stimulation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MPKQIPHTAHQPLLPMPQGCVIGSFVQRRKRFSVELRVNGGELWVHSNNSGSMLGLTRPGNPVLASPAANPARKLKYTQE CVWLPQTATPAAPDAPAGADPYARPGFWVGVNTNMPNRMLEAAFHAGRLAFAQGYTSLVREARRGQSRLDGLLTGPGLPP LWVECKNVTMMEDDAACFPDAASERGQKHLRELMDIVAQGERAAMLYLVQRPDGSCFAPADFIDPEYARLFYAALACGVE IYPYRALVDVAGIDLGPLIPLRPAPQNG
Sequences:
>Translated_268_residues MPKQIPHTAHQPLLPMPQGCVIGSFVQRRKRFSVELRVNGGELWVHSNNSGSMLGLTRPGNPVLASPAANPARKLKYTQE CVWLPQTATPAAPDAPAGADPYARPGFWVGVNTNMPNRMLEAAFHAGRLAFAQGYTSLVREARRGQSRLDGLLTGPGLPP LWVECKNVTMMEDDAACFPDAASERGQKHLRELMDIVAQGERAAMLYLVQRPDGSCFAPADFIDPEYARLFYAALACGVE IYPYRALVDVAGIDLGPLIPLRPAPQNG >Mature_267_residues PKQIPHTAHQPLLPMPQGCVIGSFVQRRKRFSVELRVNGGELWVHSNNSGSMLGLTRPGNPVLASPAANPARKLKYTQEC VWLPQTATPAAPDAPAGADPYARPGFWVGVNTNMPNRMLEAAFHAGRLAFAQGYTSLVREARRGQSRLDGLLTGPGLPPL WVECKNVTMMEDDAACFPDAASERGQKHLRELMDIVAQGERAAMLYLVQRPDGSCFAPADFIDPEYARLFYAALACGVEI YPYRALVDVAGIDLGPLIPLRPAPQNG
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family [H]
Homologues:
Organism=Escherichia coli, GI1786340, Length=242, Percent_Identity=35.1239669421488, Blast_Score=142, Evalue=3e-35,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005224 [H]
Pfam domain/function: PF03749 SfsA [H]
EC number: NA
Molecular weight: Translated: 29142; Mature: 29011
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKQIPHTAHQPLLPMPQGCVIGSFVQRRKRFSVELRVNGGELWVHSNNSGSMLGLTRPG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEECCCEEEEEECCCCCEEEEECCC NPVLASPAANPARKLKYTQECVWLPQTATPAAPDAPAGADPYARPGFWVGVNTNMPNRML CCEEECCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH EAAFHAGRLAFAQGYTSLVREARRGQSRLDGLLTGPGLPPLWVECKNVTMMEDDAACFPD HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEECCEEEECCCCCCCCC AASERGQKHLRELMDIVAQGERAAMLYLVQRPDGSCFAPADFIDPEYARLFYAALACGVE HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEECCHHCCCHHHHHHHHHHHHHCCE IYPYRALVDVAGIDLGPLIPLRPAPQNG EECHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PKQIPHTAHQPLLPMPQGCVIGSFVQRRKRFSVELRVNGGELWVHSNNSGSMLGLTRPG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEECCCEEEEEECCCCCEEEEECCC NPVLASPAANPARKLKYTQECVWLPQTATPAAPDAPAGADPYARPGFWVGVNTNMPNRML CCEEECCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH EAAFHAGRLAFAQGYTSLVREARRGQSRLDGLLTGPGLPPLWVECKNVTMMEDDAACFPD HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEECCEEEECCCCCCCCC AASERGQKHLRELMDIVAQGERAAMLYLVQRPDGSCFAPADFIDPEYARLFYAALACGVE HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEECCHHCCCHHHHHHHHHHHHHCCE IYPYRALVDVAGIDLGPLIPLRPAPQNG EECHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA