Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220905497

Identifier: 220905497

GI number: 220905497

Start: 2695025

End: 2696605

Strand: Direct

Name: 220905497

Synonym: Ddes_2235

Alternate gene names: NA

Gene position: 2695025-2696605 (Clockwise)

Preceding gene: 220905496

Following gene: 220905500

Centisome position: 93.79

GC content: 32.76

Gene sequence:

>1581_bases
ATGTCTTACAAGTCTTGGATTGATACGTCCTCATTGGATATGAATAATGAAGGGATTAGCTCTATTGTTGCTGAAACCAA
TAAAAAGCTTAGCGATTTTGATAAAAATCATTTTGTTTGTGAAGATGGTGGAAAATTTTTTGTTTATACTGAAAAAACTA
ATGAAGATGATAAATTCATGTTGACACGTCTTTCATATAAAGATTTTGCATTTAGGTATAATTGCAATGACATATATGTT
CCAAGCGGTAAAAAGGATAGCCTTTTTACTAAAAAAGGCATTGCTTCATATTGGATGAGCTGTCCTCAAAAGAGGACATT
TAATGGTATAATTTTTAACCCTAAATATAGTGGAAAGAATTTTTATAACTTGTGGCGCGGTTTTAAAATTACTTCTGATT
GCGACGGCGAGTTTTCACATATTGAAAGACATCTAAAAGAGGTCTGGTGCAACGGGAATGAAGAACATTATTCATATCTT
ATAAAATGGTTTGCTCACATGATTCAATATCCCAGTAAAAAAGCTGGCGTTGCGCTTGTCATAAAGGGTGAGAAAGGCAC
GGGCAAAACTGGCTTTATTTCTAAGCTTGCTGAGAAAATTCTTGGAGAACATTATATGTTGGTTAGTTCTTCACATGATA
TCTATGGTAACTTTAATTCGCAACAATATGCAAAGTTACTGATAACTTTTGATGAAGCTATTTGGAATGGCGGTAAGAGC
ATGGAAGGAAGATTGAAGTCTTTGATTACTGATACAAATATCCTTATTGAAAAAAAGGGTATGGATGCTGAAATCAAGAA
AAATTATTCTCGCTATATTCTTTTAACAAATGAGAAGTTTTCTGTACCTGCAACATATGATGAAAGAAGGTTTTTTGCAT
TAAGAATAAGCAATGAGCGTAGGAATGACATTAAGTATTTTGACGAGTTATATAAAGCGATGGAACATGAAATAGATAAT
TTCTTCGGATTCTTAAAAAAGTTTGATCTTTGTGAAGAAGATGTGTTCACACCTCCTGCCACTTCTGCTTTATTCGAAGA
TGTATTTGCAGGTATGGATTTTTTTGATCAATGGCTTTTTAACTTGATTGATGGGTACGTGATCAAACAAGAAAACAGTT
TCTATTTATGGGATAATTCCATAGAAAAAATTGGATTTAATAAGCATGTGAGGACTAAAACATTATTTGATAACTTTATG
GAGTCTAAAGAAAGGAGTGGTCAGTCATCATTTATTCATACAGTTACTAAATTTACGCAAAAGATGAGCAATGGCAAAAG
GGATTCATATAGTTTTATTTATAGAAAATGTGAAGGGCAAAACTGTATATTTTTGCCATCAATTGATGAGGCAAAAAAAA
TTTATGAGAAGAAATTCTCTTGTATTGTTGAATGGACTGAACTTAATGAAAGCACCAGAGTTCTTAATTATAAAGAAACT
TTAGAGCTGCTTAAAAAAGTTTTAGGCAAAAAATATCGCCAAAAAGATGCCATTAAAACGGCATATCATATGTATAAAGA
TAAACAATTCGCGGAGGAGTTTGGGCAGATCTTTGGCTCCAACACTTCTGGCGCGGCATAA

Upstream 100 bases:

>100_bases
TTGAGTGTGAAGCTAAACGAATTGTCATTGAATTTTGCTAGGTGATATGGGGGGAATTCTCCCCATAAAAATCAAACTTT
ATTAAATTAAGGAGTTTTAT

Downstream 100 bases:

>100_bases
CGTGAGATATTCACAGCTAAAATAGCTGAGGCTTGGCACTCAAGGCCCTTTCCTTTTCTCCTTGGAGTTCATGGTAATAG
GTATCTGCCGTCATTCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MSYKSWIDTSSLDMNNEGISSIVAETNKKLSDFDKNHFVCEDGGKFFVYTEKTNEDDKFMLTRLSYKDFAFRYNCNDIYV
PSGKKDSLFTKKGIASYWMSCPQKRTFNGIIFNPKYSGKNFYNLWRGFKITSDCDGEFSHIERHLKEVWCNGNEEHYSYL
IKWFAHMIQYPSKKAGVALVIKGEKGTGKTGFISKLAEKILGEHYMLVSSSHDIYGNFNSQQYAKLLITFDEAIWNGGKS
MEGRLKSLITDTNILIEKKGMDAEIKKNYSRYILLTNEKFSVPATYDERRFFALRISNERRNDIKYFDELYKAMEHEIDN
FFGFLKKFDLCEEDVFTPPATSALFEDVFAGMDFFDQWLFNLIDGYVIKQENSFYLWDNSIEKIGFNKHVRTKTLFDNFM
ESKERSGQSSFIHTVTKFTQKMSNGKRDSYSFIYRKCEGQNCIFLPSIDEAKKIYEKKFSCIVEWTELNESTRVLNYKET
LELLKKVLGKKYRQKDAIKTAYHMYKDKQFAEEFGQIFGSNTSGAA

Sequences:

>Translated_526_residues
MSYKSWIDTSSLDMNNEGISSIVAETNKKLSDFDKNHFVCEDGGKFFVYTEKTNEDDKFMLTRLSYKDFAFRYNCNDIYV
PSGKKDSLFTKKGIASYWMSCPQKRTFNGIIFNPKYSGKNFYNLWRGFKITSDCDGEFSHIERHLKEVWCNGNEEHYSYL
IKWFAHMIQYPSKKAGVALVIKGEKGTGKTGFISKLAEKILGEHYMLVSSSHDIYGNFNSQQYAKLLITFDEAIWNGGKS
MEGRLKSLITDTNILIEKKGMDAEIKKNYSRYILLTNEKFSVPATYDERRFFALRISNERRNDIKYFDELYKAMEHEIDN
FFGFLKKFDLCEEDVFTPPATSALFEDVFAGMDFFDQWLFNLIDGYVIKQENSFYLWDNSIEKIGFNKHVRTKTLFDNFM
ESKERSGQSSFIHTVTKFTQKMSNGKRDSYSFIYRKCEGQNCIFLPSIDEAKKIYEKKFSCIVEWTELNESTRVLNYKET
LELLKKVLGKKYRQKDAIKTAYHMYKDKQFAEEFGQIFGSNTSGAA
>Mature_525_residues
SYKSWIDTSSLDMNNEGISSIVAETNKKLSDFDKNHFVCEDGGKFFVYTEKTNEDDKFMLTRLSYKDFAFRYNCNDIYVP
SGKKDSLFTKKGIASYWMSCPQKRTFNGIIFNPKYSGKNFYNLWRGFKITSDCDGEFSHIERHLKEVWCNGNEEHYSYLI
KWFAHMIQYPSKKAGVALVIKGEKGTGKTGFISKLAEKILGEHYMLVSSSHDIYGNFNSQQYAKLLITFDEAIWNGGKSM
EGRLKSLITDTNILIEKKGMDAEIKKNYSRYILLTNEKFSVPATYDERRFFALRISNERRNDIKYFDELYKAMEHEIDNF
FGFLKKFDLCEEDVFTPPATSALFEDVFAGMDFFDQWLFNLIDGYVIKQENSFYLWDNSIEKIGFNKHVRTKTLFDNFME
SKERSGQSSFIHTVTKFTQKMSNGKRDSYSFIYRKCEGQNCIFLPSIDEAKKIYEKKFSCIVEWTELNESTRVLNYKETL
ELLKKVLGKKYRQKDAIKTAYHMYKDKQFAEEFGQIFGSNTSGAA

Specific function: Unknown

COG id: COG4983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61530; Mature: 61399

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKSWIDTSSLDMNNEGISSIVAETNKKLSDFDKNHFVCEDGGKFFVYTEKTNEDDKFM
CCCCHHCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCEEEECCCEEEEEECCCCCCCCEE
LTRLSYKDFAFRYNCNDIYVPSGKKDSLFTKKGIASYWMSCPQKRTFNGIIFNPKYSGKN
EEEECCCCEEEEECCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCH
FYNLWRGFKITSDCDGEFSHIERHLKEVWCNGNEEHYSYLIKWFAHMIQYPSKKAGVALV
HHHHHCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE
IKGEKGTGKTGFISKLAEKILGEHYMLVSSSHDIYGNFNSQQYAKLLITFDEAIWNGGKS
EECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHEEEHHHHHCCCCC
MEGRLKSLITDTNILIEKKGMDAEIKKNYSRYILLTNEKFSVPATYDERRFFALRISNER
HHHHHHHHHCCCCEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC
RNDIKYFDELYKAMEHEIDNFFGFLKKFDLCEEDVFTPPATSALFEDVFAGMDFFDQWLF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
NLIDGYVIKQENSFYLWDNSIEKIGFNKHVRTKTLFDNFMESKERSGQSSFIHTVTKFTQ
HHHCCEEEEECCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KMSNGKRDSYSFIYRKCEGQNCIFLPSIDEAKKIYEKKFSCIVEWTELNESTRVLNYKET
HHHCCCCCCHHHHHHEECCCCEEEECCCHHHHHHHHHHHHHEEEHHHCCCCHHEECHHHH
LELLKKVLGKKYRQKDAIKTAYHMYKDKQFAEEFGQIFGSNTSGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SYKSWIDTSSLDMNNEGISSIVAETNKKLSDFDKNHFVCEDGGKFFVYTEKTNEDDKFM
CCCHHCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCEEEECCCEEEEEECCCCCCCCEE
LTRLSYKDFAFRYNCNDIYVPSGKKDSLFTKKGIASYWMSCPQKRTFNGIIFNPKYSGKN
EEEECCCCEEEEECCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCH
FYNLWRGFKITSDCDGEFSHIERHLKEVWCNGNEEHYSYLIKWFAHMIQYPSKKAGVALV
HHHHHCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE
IKGEKGTGKTGFISKLAEKILGEHYMLVSSSHDIYGNFNSQQYAKLLITFDEAIWNGGKS
EECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHEEEHHHHHCCCCC
MEGRLKSLITDTNILIEKKGMDAEIKKNYSRYILLTNEKFSVPATYDERRFFALRISNER
HHHHHHHHHCCCCEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC
RNDIKYFDELYKAMEHEIDNFFGFLKKFDLCEEDVFTPPATSALFEDVFAGMDFFDQWLF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
NLIDGYVIKQENSFYLWDNSIEKIGFNKHVRTKTLFDNFMESKERSGQSSFIHTVTKFTQ
HHHCCEEEEECCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KMSNGKRDSYSFIYRKCEGQNCIFLPSIDEAKKIYEKKFSCIVEWTELNESTRVLNYKET
HHHCCCCCCHHHHHHEECCCCEEEECCCHHHHHHHHHHHHHEEEHHHCCCCHHEECHHHH
LELLKKVLGKKYRQKDAIKTAYHMYKDKQFAEEFGQIFGSNTSGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA