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The map label for this gene is atpH

Identifier: 220905447

GI number: 220905447

Start: 2635892

End: 2636443

Strand: Direct

Name: atpH

Synonym: Ddes_2185

Alternate gene names: 220905447

Gene position: 2635892-2636443 (Clockwise)

Preceding gene: 220905446

Following gene: 220905448

Centisome position: 91.73

GC content: 56.52

Gene sequence:

>552_bases
TTGATCGACACCGTGGTTGCACGCAGGTACGCCAACGCCATCTTTGCGTTGGGCAAGAAGGATGGGGACGACGCCCTGAG
CTCGCGCGGTGAATGCCTTGCCGCTCTCGGCGAAGCGCTTGCCGCCGCGCCCGGACTTGACATGACCCTTAAAAGTCCCG
TGATCGGCGTGGAAGAAAAAAAAGCGGTTCTTGACAAACTGCTGGGCAAGCTCAAGGCCGACCAGACGATGCGCAGCTTC
TGCTTTTTGCTGGCAGACAAGGAAAGGCTCGCCTTTCTGCGCGAAATTTCCGCCTGGTATGGCAAACTGCTTGACGAAGC
CAAGGGCATTGTCCGGGGCGAACTCGTCACGGCAGTAAAACTTTCTGCCGACAAAAAGGCCAAGCTCAAAGAATCGCTGG
AAAAGAAAACCGGCACCGCCCTTGAGCTTACCTTTGCCGTCGACAAAGACATACTAGGGGGGATGGTGCTCAAAATGGGT
GACCGGGTGCTGGACGCAAGTCTGCGCGCGCAATTGGGTATCCTTCGGGAGACTTTCAAGAGGGGTGAATAG

Upstream 100 bases:

>100_bases
ACGAAATCGTGGATGCCGCCGAAAAGGCCCTGAGCGGCAAGCTCAATGCCGATGCCCACGACAAGCTTATCGCCAACTCC
CTTAAAAAGGTGGTGCTCCA

Downstream 100 bases:

>100_bases
CACATGCAGATCAAAGCGGAAGAGATAAGCAAGATCATTGAGGATCAAATCCAGAACTACGAGCAGCGCGTAGAAATGAG
CGAAACCGGCACCGTGCTTT

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MIDTVVARRYANAIFALGKKDGDDALSSRGECLAALGEALAAAPGLDMTLKSPVIGVEEKKAVLDKLLGKLKADQTMRSF
CFLLADKERLAFLREISAWYGKLLDEAKGIVRGELVTAVKLSADKKAKLKESLEKKTGTALELTFAVDKDILGGMVLKMG
DRVLDASLRAQLGILRETFKRGE

Sequences:

>Translated_183_residues
MIDTVVARRYANAIFALGKKDGDDALSSRGECLAALGEALAAAPGLDMTLKSPVIGVEEKKAVLDKLLGKLKADQTMRSF
CFLLADKERLAFLREISAWYGKLLDEAKGIVRGELVTAVKLSADKKAKLKESLEKKTGTALELTFAVDKDILGGMVLKMG
DRVLDASLRAQLGILRETFKRGE
>Mature_183_residues
MIDTVVARRYANAIFALGKKDGDDALSSRGECLAALGEALAAAPGLDMTLKSPVIGVEEKKAVLDKLLGKLKADQTMRSF
CFLLADKERLAFLREISAWYGKLLDEAKGIVRGELVTAVKLSADKKAKLKESLEKKTGTALELTFAVDKDILGGMVLKMG
DRVLDASLRAQLGILRETFKRGE

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_DESDA (B8J436)

Other databases:

- EMBL:   CP001358
- RefSeq:   YP_002480759.1
- GeneID:   7285901
- GenomeReviews:   CP001358_GR
- KEGG:   dds:Ddes_2185
- HOGENOM:   HBG668108
- ProtClustDB:   PRK13429
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19829; Mature: 19829

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTVVARRYANAIFALGKKDGDDALSSRGECLAALGEALAAAPGLDMTLKSPVIGVEEK
CCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
KAVLDKLLGKLKADQTMRSFCFLLADKERLAFLREISAWYGKLLDEAKGIVRGELVTAVK
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSADKKAKLKESLEKKTGTALELTFAVDKDILGGMVLKMGDRVLDASLRAQLGILRETFK
HCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGE
CCC
>Mature Secondary Structure
MIDTVVARRYANAIFALGKKDGDDALSSRGECLAALGEALAAAPGLDMTLKSPVIGVEEK
CCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
KAVLDKLLGKLKADQTMRSFCFLLADKERLAFLREISAWYGKLLDEAKGIVRGELVTAVK
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSADKKAKLKESLEKKTGTALELTFAVDKDILGGMVLKMGDRVLDASLRAQLGILRETFK
HCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA