Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220905414

Identifier: 220905414

GI number: 220905414

Start: 2595567

End: 2596922

Strand: Direct

Name: 220905414

Synonym: Ddes_2152

Alternate gene names: NA

Gene position: 2595567-2596922 (Clockwise)

Preceding gene: 220905413

Following gene: 220905415

Centisome position: 90.33

GC content: 63.2

Gene sequence:

>1356_bases
GTGCGTACAGCCATAACGTGTCGCCATCCCCTTGCGCGCATGACGCTTGGCCTGCTGCTGCTCATGCTGCTCGGCTGCCT
CAGTGCCTGCAAGATGCCTTTTGGCGGAGGCCAGCGCCCAGCGCCCGCGCCCGTTCAAAGCTCCAAGCCAGAAGCCTGCG
TGGCTCTGGCCCTGCCCGCGTCCGGGCAATATGCGCCCATCGGCAACAAGATCCGCCAGGGCGCGCAGATCGCCCAGAAA
GAAATGGCCGCCAACGGCGTCAACGTGCGCCTTGAAATAATCAACACCGAAGCCTCGGACTGGCTGCAGAAGATTAACGC
CCTGCCCGCCGCCTGTGCTGTGGTGGGCGGCCCCCTGCAGGCATCCGGCTACGCTCAGGCCCGCAAGTCCGGCGCTACGG
ACAAGAAAGCTTTTTTCACCTTTCTGCCCTCGCTGGAACAGGGTGACGAAGGTACGCATGCATGGCGCTTTTTTCCCGGC
CCGCAGGACCAGATTGATGCCCTTGTCGGCTTTGCCACCGACAGCCTGAACATCCACAGCTACGGAGCCTTCTACCCCAG
CGATGCCTATGGCGTGCGCATGACCGGCCTGCTGGAACAAAGCCTGTACAAACGCAACATGCCTCTCCAGAAGGCCGGCT
ACAATCCGTCCGATCCCACATCGTGGAGTTCCGCCGCAGCGCCGCTCATCAACGCCCAGACACCTGAAGGCAGCCGCACC
CCCGTTCCCCAGACCGCCTTTGAAGCGCTTTTTGTGCCGGATTCGTGGAAAAGTATGGACATGCTGACCACAAGTCTGCT
CTATAACGGCGAAGACCGCCTGGTGCTGCTCGGTACGACCCTGTGGGAACAGGGCCTGTACGGCAAGGTGGTCAATTCTC
CTGAAAAATTCGCCCTGGCGGTCTTTCCTGCCGCCTGGAATCCGACCCACGCCCCCCGCGCCCTCCAGTCCTCGAGTTCG
GACTTCTGGACGGCCCTCGGGTACGATTTTGCCCGTTTCAGCGTCAGCCTCGGCCTGACCTCACGTCTGACCGCGCCGGA
AATAACCGCCCGTGCGCAGCGCGCCTCACACATGGTCTGGGGTATGGCTCCCATCACCTGGGACAGCGCGGGCGTGGCGC
ATCAGAAGCTCTTTATCTTCGGCGTGTCCCCCACGGGCATGGTTCCCGTCAACGTAGACGAATTCCGGCAGACACGCAGC
AATATCCTGCAGCAATCCGCCCTGCGCATGCAGGGTCTGCCGCCCGTGGATGCGGAGGGCAACCCCCTTGCGCCCGACGG
GCAGCAGCCGACGTTGCAACCCATCGGCACGACTCCCAGGCCCTCGTACAAGCTGAGCCTGCCGTCGCGCCTGTAG

Upstream 100 bases:

>100_bases
CTGTACTAAAAAGGTCTGGCTCCCTGTGAGCCAGACCTTTTGCTTTTTATGGGCAAGGGGCCATCCGGCCCGTGCCAAAA
CTCTCCTGCCGGAGGATACA

Downstream 100 bases:

>100_bases
GGCTGCCCTATCTTAAAAACTGCTCCCCGCGTGGGTATAGCCGCGCGGGGAGCAGCCGATAACAGCGTTTCGCCGGAACC
TGTTACGGCAAAAAATTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MRTAITCRHPLARMTLGLLLLMLLGCLSACKMPFGGGQRPAPAPVQSSKPEACVALALPASGQYAPIGNKIRQGAQIAQK
EMAANGVNVRLEIINTEASDWLQKINALPAACAVVGGPLQASGYAQARKSGATDKKAFFTFLPSLEQGDEGTHAWRFFPG
PQDQIDALVGFATDSLNIHSYGAFYPSDAYGVRMTGLLEQSLYKRNMPLQKAGYNPSDPTSWSSAAAPLINAQTPEGSRT
PVPQTAFEALFVPDSWKSMDMLTTSLLYNGEDRLVLLGTTLWEQGLYGKVVNSPEKFALAVFPAAWNPTHAPRALQSSSS
DFWTALGYDFARFSVSLGLTSRLTAPEITARAQRASHMVWGMAPITWDSAGVAHQKLFIFGVSPTGMVPVNVDEFRQTRS
NILQQSALRMQGLPPVDAEGNPLAPDGQQPTLQPIGTTPRPSYKLSLPSRL

Sequences:

>Translated_451_residues
MRTAITCRHPLARMTLGLLLLMLLGCLSACKMPFGGGQRPAPAPVQSSKPEACVALALPASGQYAPIGNKIRQGAQIAQK
EMAANGVNVRLEIINTEASDWLQKINALPAACAVVGGPLQASGYAQARKSGATDKKAFFTFLPSLEQGDEGTHAWRFFPG
PQDQIDALVGFATDSLNIHSYGAFYPSDAYGVRMTGLLEQSLYKRNMPLQKAGYNPSDPTSWSSAAAPLINAQTPEGSRT
PVPQTAFEALFVPDSWKSMDMLTTSLLYNGEDRLVLLGTTLWEQGLYGKVVNSPEKFALAVFPAAWNPTHAPRALQSSSS
DFWTALGYDFARFSVSLGLTSRLTAPEITARAQRASHMVWGMAPITWDSAGVAHQKLFIFGVSPTGMVPVNVDEFRQTRS
NILQQSALRMQGLPPVDAEGNPLAPDGQQPTLQPIGTTPRPSYKLSLPSRL
>Mature_451_residues
MRTAITCRHPLARMTLGLLLLMLLGCLSACKMPFGGGQRPAPAPVQSSKPEACVALALPASGQYAPIGNKIRQGAQIAQK
EMAANGVNVRLEIINTEASDWLQKINALPAACAVVGGPLQASGYAQARKSGATDKKAFFTFLPSLEQGDEGTHAWRFFPG
PQDQIDALVGFATDSLNIHSYGAFYPSDAYGVRMTGLLEQSLYKRNMPLQKAGYNPSDPTSWSSAAAPLINAQTPEGSRT
PVPQTAFEALFVPDSWKSMDMLTTSLLYNGEDRLVLLGTTLWEQGLYGKVVNSPEKFALAVFPAAWNPTHAPRALQSSSS
DFWTALGYDFARFSVSLGLTSRLTAPEITARAQRASHMVWGMAPITWDSAGVAHQKLFIFGVSPTGMVPVNVDEFRQTRS
NILQQSALRMQGLPPVDAEGNPLAPDGQQPTLQPIGTTPRPSYKLSLPSRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48561; Mature: 48561

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00844 DALA_DALA_LIGASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTAITCRHPLARMTLGLLLLMLLGCLSACKMPFGGGQRPAPAPVQSSKPEACVALALPA
CCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
SGQYAPIGNKIRQGAQIAQKEMAANGVNVRLEIINTEASDWLQKINALPAACAVVGGPLQ
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHCCCCCC
ASGYAQARKSGATDKKAFFTFLPSLEQGDEGTHAWRFFPGPQDQIDALVGFATDSLNIHS
CCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEE
YGAFYPSDAYGVRMTGLLEQSLYKRNMPLQKAGYNPSDPTSWSSAAAPLINAQTPEGSRT
CCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHCCCEEECCCCCCCCC
PVPQTAFEALFVPDSWKSMDMLTTSLLYNGEDRLVLLGTTLWEQGLYGKVVNSPEKFALA
CCCHHHHHEEECCCCCCHHHHHHHHHEECCCCCEEEEECHHHHCCCCCHHCCCCCEEEEE
VFPAAWNPTHAPRALQSSSSDFWTALGYDFARFSVSLGLTSRLTAPEITARAQRASHMVW
EEECCCCCCCCCHHHHCCCCCHHHHHCCCEEHEEEEECCCCCCCCCHHHHHHHHHHHHEE
GMAPITWDSAGVAHQKLFIFGVSPTGMVPVNVDEFRQTRSNILQQSALRMQGLPPVDAEG
ECCCEEECCCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NPLAPDGQQPTLQPIGTTPRPSYKLSLPSRL
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MRTAITCRHPLARMTLGLLLLMLLGCLSACKMPFGGGQRPAPAPVQSSKPEACVALALPA
CCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
SGQYAPIGNKIRQGAQIAQKEMAANGVNVRLEIINTEASDWLQKINALPAACAVVGGPLQ
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHCCCCCC
ASGYAQARKSGATDKKAFFTFLPSLEQGDEGTHAWRFFPGPQDQIDALVGFATDSLNIHS
CCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEE
YGAFYPSDAYGVRMTGLLEQSLYKRNMPLQKAGYNPSDPTSWSSAAAPLINAQTPEGSRT
CCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHCCCEEECCCCCCCCC
PVPQTAFEALFVPDSWKSMDMLTTSLLYNGEDRLVLLGTTLWEQGLYGKVVNSPEKFALA
CCCHHHHHEEECCCCCCHHHHHHHHHEECCCCCEEEEECHHHHCCCCCHHCCCCCEEEEE
VFPAAWNPTHAPRALQSSSSDFWTALGYDFARFSVSLGLTSRLTAPEITARAQRASHMVW
EEECCCCCCCCCHHHHCCCCCHHHHHCCCEEHEEEEECCCCCCCCCHHHHHHHHHHHHEE
GMAPITWDSAGVAHQKLFIFGVSPTGMVPVNVDEFRQTRSNILQQSALRMQGLPPVDAEG
ECCCEEECCCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NPLAPDGQQPTLQPIGTTPRPSYKLSLPSRL
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA