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The map label for this gene is 220905239

Identifier: 220905239

GI number: 220905239

Start: 2379625

End: 2380476

Strand: Direct

Name: 220905239

Synonym: Ddes_1977

Alternate gene names: NA

Gene position: 2379625-2380476 (Clockwise)

Preceding gene: 220905236

Following gene: 220905240

Centisome position: 82.81

GC content: 64.79

Gene sequence:

>852_bases
ATGTCAACATTCATGTTTTCCAAATGGAGCCCCGGCGGCAACACCACCCTCCTGTTTCCGGAGCACGGCCTTGTTCCCGT
GCAGCAGGCAAACCTTGCCCGCCAGGCCCTGGATCCCTCTGTGCTCGGCGGTGAACAGGCAGGCTTTGTAGATCTTCAGG
CCCACAGCCTGCGCATGGCGGGCGGCGAGTTTTGCGTCAATGCCAGCCGTGCCGTGGGCGCGCTGCTGGCCTGTAAAGAA
GAACGCACCCAAAACGCAGCTGCGCCCCCAACCCCGGAACAGGCGGCACAAGCCGCCCGGCAGTACGAGATCAGCGTCTC
CGGCTGGCAAAGCCCGGTGCGGCTGCTCGTGCGCGGGAGAAGCCCCCTGTGGCAGGTAGAGGCCGTGCTGCGGCTGCCCG
ACGTTTTTATGGAGTGCCTGACCAACGGCATCTGCCTGGTGCGGCTGCCCGGCATCTGCCATCTGCTGCTGGATGCGCGC
ACCCACGGCCACCCCGAAGACTGCCACGCCGCTGCCGCCCTGCTGCGCGAACGCTACAATCTGGAGCAGGAAGAAGCCGT
GGGCGTCATCTGGTGGCAGGTGCTGCAGGGGCAGCTTGATATGTTGCCTCTTGTGCATGTGCGCGACACCCGCACCGATT
ATCTGGAAAGCGCCTGCGGCTCCGGCGCTCTGGCCCTGGCCCTGAGCCGCGCCAAAAGTAACGGCGGCAAACATTTTTCC
ATCATGCAGCCTGGCGGTTCTCCGCTGGAGGTGCGTCTTTTCAGCGAAGACGGAACCGCCATGGCGGGCATAAACGGCCC
GGTAGCCCTGGTTGCCGATGGGCAGGTGTGGTTGCCCGGCGGCGTCATCTGA

Upstream 100 bases:

>100_bases
CTCCTGAAGGCCATATCCGCCTGAAAACACCGCAGTTACGGCTGCTGGACAGCGCCCCGGCCCTGAGGCATACTTATGTC
AGGAGCCAAGGAATATCTCT

Downstream 100 bases:

>100_bases
GTATGGCCGCAAAGCTGCGCGAAGGATTCACCACCGGCTCGGCAGCCACGGGCGCAGCCCTGGCCGCCCTGCACCTGCTG
CGCTCCGGCTCTGCACCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSTFMFSKWSPGGNTTLLFPEHGLVPVQQANLARQALDPSVLGGEQAGFVDLQAHSLRMAGGEFCVNASRAVGALLACKE
ERTQNAAAPPTPEQAAQAARQYEISVSGWQSPVRLLVRGRSPLWQVEAVLRLPDVFMECLTNGICLVRLPGICHLLLDAR
THGHPEDCHAAAALLRERYNLEQEEAVGVIWWQVLQGQLDMLPLVHVRDTRTDYLESACGSGALALALSRAKSNGGKHFS
IMQPGGSPLEVRLFSEDGTAMAGINGPVALVADGQVWLPGGVI

Sequences:

>Translated_283_residues
MSTFMFSKWSPGGNTTLLFPEHGLVPVQQANLARQALDPSVLGGEQAGFVDLQAHSLRMAGGEFCVNASRAVGALLACKE
ERTQNAAAPPTPEQAAQAARQYEISVSGWQSPVRLLVRGRSPLWQVEAVLRLPDVFMECLTNGICLVRLPGICHLLLDAR
THGHPEDCHAAAALLRERYNLEQEEAVGVIWWQVLQGQLDMLPLVHVRDTRTDYLESACGSGALALALSRAKSNGGKHFS
IMQPGGSPLEVRLFSEDGTAMAGINGPVALVADGQVWLPGGVI
>Mature_282_residues
STFMFSKWSPGGNTTLLFPEHGLVPVQQANLARQALDPSVLGGEQAGFVDLQAHSLRMAGGEFCVNASRAVGALLACKEE
RTQNAAAPPTPEQAAQAARQYEISVSGWQSPVRLLVRGRSPLWQVEAVLRLPDVFMECLTNGICLVRLPGICHLLLDART
HGHPEDCHAAAALLRERYNLEQEEAVGVIWWQVLQGQLDMLPLVHVRDTRTDYLESACGSGALALALSRAKSNGGKHFSI
MQPGGSPLEVRLFSEDGTAMAGINGPVALVADGQVWLPGGVI

Specific function: Unknown

COG id: COG0253

COG function: function code E; Diaminopimelate epimerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30376; Mature: 30245

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFMFSKWSPGGNTTLLFPEHGLVPVQQANLARQALDPSVLGGEQAGFVDLQAHSLRMA
CCCCEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEHHEEEEC
GGEFCVNASRAVGALLACKEERTQNAAAPPTPEQAAQAARQYEISVSGWQSPVRLLVRGR
CCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHCCC
SPLWQVEAVLRLPDVFMECLTNGICLVRLPGICHLLLDARTHGHPEDCHAAAALLRERYN
CCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
LEQEEAVGVIWWQVLQGQLDMLPLVHVRDTRTDYLESACGSGALALALSRAKSNGGKHFS
CCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEE
IMQPGGSPLEVRLFSEDGTAMAGINGPVALVADGQVWLPGGVI
EECCCCCCEEEEEECCCCCEEECCCCCEEEEECCEEECCCCCC
>Mature Secondary Structure 
STFMFSKWSPGGNTTLLFPEHGLVPVQQANLARQALDPSVLGGEQAGFVDLQAHSLRMA
CCCEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEHHEEEEC
GGEFCVNASRAVGALLACKEERTQNAAAPPTPEQAAQAARQYEISVSGWQSPVRLLVRGR
CCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHCCC
SPLWQVEAVLRLPDVFMECLTNGICLVRLPGICHLLLDARTHGHPEDCHAAAALLRERYN
CCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
LEQEEAVGVIWWQVLQGQLDMLPLVHVRDTRTDYLESACGSGALALALSRAKSNGGKHFS
CCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEE
IMQPGGSPLEVRLFSEDGTAMAGINGPVALVADGQVWLPGGVI
EECCCCCCEEEEEECCCCCEEECCCCCEEEEECCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA