| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905173
Identifier: 220905173
GI number: 220905173
Start: 2301010
End: 2301786
Strand: Direct
Name: 220905173
Synonym: Ddes_1911
Alternate gene names: NA
Gene position: 2301010-2301786 (Clockwise)
Preceding gene: 220905172
Following gene: 220905174
Centisome position: 80.08
GC content: 63.58
Gene sequence:
>777_bases GTGAGCCTGCTCATCTGCGCTGCCACTGGCCCGGAACTGGGGGGCCTTCTGCCGGGTTTTGCCCCGCCTTCCGCGTCTGG GGGGCATGGCGGAGCACACGGGGCCGAGAGGTATACTGCGGATGCCACGGCATGGCCCGAAATGCGGCTCTGGCCTGTAC AGCTTAAAAAAAGCGCGGCACTGTGCTGCCTTACAGGTATCGGCCCGGTTAACGCGGCCCTTGCCATGGGGCATGCCCTG AGCCGCGCCGAAGCCGAAGGCTCTCCCATAAGCGCAGTGCTTAATGTGGGCCTTGCCGGAGCTTTTGACCTTGCAAGCCA CCCCCTGCTTTCCCATTGCCTGGTGCAGGAGGAAATATGGCCGGAATATGGCCTGCATGACGGCCAGACCGTTATTGCCG GGGCTTTTGGTTTTCCGCAGTGGCAGCCCCCGCAAGGAGAGGCCGTGCGTGACCGCCTGCCGCTTTGCGGCGTTGAGGCC CTGTCGCCGTTCGGGGGCAGATGTGATGACGGCACACTGGCCCCTTGCCGCTCGCTGACCGTGGCGGGCGTCAGTGCAAG CTTTGCGCGCGCGGCGGATCTGCGGAGCCGCTATCAGGCTGATCTGGAAAATATGGAAGGCTTTGCCGTGGCTTATGCCT GCGCACGCCAAGGCATCGCCTGTGTGGAAGTACGCAGCGTGTCCAACAAGGTGGGTCCCCGCGCCAGAGAGGAAAAAGAT TTTCCCGGCGCATTGCGAGCCCTTGCCCAGGTGCTACCCGCCCTTAACCTCATCTGA
Upstream 100 bases:
>100_bases TCGCCCAGCCGGACAAGGCCGTGGTGCTGGACGTAAAAAGCTTTCTCGACCCCGCTGCCATGCGCAGCGCGGGCATAGAT TACTGGAGGCTGTAAACCGC
Downstream 100 bases:
>100_bases GTAGTGAAATGATTCAACTCAAAGCACGCATTGCCCTGGAACTTCCGGCCATCAACCGCGCCCTTGACCGGGCTGTGGAG GTATTGCCCGAACCGGTACG
Product: purine or other phosphorylase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSLLICAATGPELGGLLPGFAPPSASGGHGGAHGAERYTADATAWPEMRLWPVQLKKSAALCCLTGIGPVNAALAMGHAL SRAEAEGSPISAVLNVGLAGAFDLASHPLLSHCLVQEEIWPEYGLHDGQTVIAGAFGFPQWQPPQGEAVRDRLPLCGVEA LSPFGGRCDDGTLAPCRSLTVAGVSASFARAADLRSRYQADLENMEGFAVAYACARQGIACVEVRSVSNKVGPRAREEKD FPGALRALAQVLPALNLI
Sequences:
>Translated_258_residues MSLLICAATGPELGGLLPGFAPPSASGGHGGAHGAERYTADATAWPEMRLWPVQLKKSAALCCLTGIGPVNAALAMGHAL SRAEAEGSPISAVLNVGLAGAFDLASHPLLSHCLVQEEIWPEYGLHDGQTVIAGAFGFPQWQPPQGEAVRDRLPLCGVEA LSPFGGRCDDGTLAPCRSLTVAGVSASFARAADLRSRYQADLENMEGFAVAYACARQGIACVEVRSVSNKVGPRAREEKD FPGALRALAQVLPALNLI >Mature_257_residues SLLICAATGPELGGLLPGFAPPSASGGHGGAHGAERYTADATAWPEMRLWPVQLKKSAALCCLTGIGPVNAALAMGHALS RAEAEGSPISAVLNVGLAGAFDLASHPLLSHCLVQEEIWPEYGLHDGQTVIAGAFGFPQWQPPQGEAVRDRLPLCGVEAL SPFGGRCDDGTLAPCRSLTVAGVSASFARAADLRSRYQADLENMEGFAVAYACARQGIACVEVRSVSNKVGPRAREEKDF PGALRALAQVLPALNLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26780; Mature: 26649
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLICAATGPELGGLLPGFAPPSASGGHGGAHGAERYTADATAWPEMRLWPVQLKKSAA CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEHHHHHCCCE LCCLTGIGPVNAALAMGHALSRAEAEGSPISAVLNVGLAGAFDLASHPLLSHCLVQEEIW EEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHC PEYGLHDGQTVIAGAFGFPQWQPPQGEAVRDRLPLCGVEALSPFGGRCDDGTLAPCRSLT CCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHEE VAGVSASFARAADLRSRYQADLENMEGFAVAYACARQGIACVEVRSVSNKVGPRAREEKD ECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCC FPGALRALAQVLPALNLI CCHHHHHHHHHHHHHCCC >Mature Secondary Structure SLLICAATGPELGGLLPGFAPPSASGGHGGAHGAERYTADATAWPEMRLWPVQLKKSAA CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEHHHHHCCCE LCCLTGIGPVNAALAMGHALSRAEAEGSPISAVLNVGLAGAFDLASHPLLSHCLVQEEIW EEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHC PEYGLHDGQTVIAGAFGFPQWQPPQGEAVRDRLPLCGVEALSPFGGRCDDGTLAPCRSLT CCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHEE VAGVSASFARAADLRSRYQADLENMEGFAVAYACARQGIACVEVRSVSNKVGPRAREEKD ECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCC FPGALRALAQVLPALNLI CCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA