| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905168
Identifier: 220905168
GI number: 220905168
Start: 2295197
End: 2297473
Strand: Direct
Name: 220905168
Synonym: Ddes_1906
Alternate gene names: NA
Gene position: 2295197-2297473 (Clockwise)
Preceding gene: 220905167
Following gene: 220905169
Centisome position: 79.88
GC content: 64.91
Gene sequence:
>2277_bases ATGGCTGCCCAAAACGCCCATGAAAATACAGAAGAAATCATCGACCTGACAGAACTTATCGAAAAAGGCGAGGTTCCGGC AACCGACGAGGCCGCCCCCGCTCCCACCGATGACGATCAGAGCGGTCTGCATTCGCACATGCGCAGCCTGAACGAAGAAG GCCGCCAGGCCGATGCGGAAATTGACGATCTGCTGGCGCAGATGGAAGCCAGGGACGATAGTGAAGACATTCCCGCCGAA GGCGAGATGCCACCCGCAGACACAGACAATATTGCGGCTCCGCAAGACGATGAGCCTGCTTTTTCAGGCACTGGCGTTGC GCCTGATGGTCATATTGTGGACCCCAACGAAAAGCTGCATATGCCCGGCATGGGAGACGTCGACAATCTTTTGAATTCTC TCGATATTCCACCACAGCCACCGCAACGCTCCACGGCGGCTCCGTCGCCCCGCAACACGGATGAAGCCGTGGACCAGATG CTGGACGGCCTGACGGGAGCCGCATGCCCCACCGCTGCCCGGCCTGAGACCGCTGCAAACGGCACACACGCCGACACGCC GGATGTGGATGAACTGCTGGCCGCCGGAACCGTGCCGGAGCCTGTTATTTCTGACGAACTGGAAGCCCTGCTCAGCGCAA GCGATCCCGCGGCATGGCACGCCGCTCCCGCCCATGCGGGCAAAGCCGCAAATGACGCTCCAGGCGCCGCAACCGAAGAA CGCCCGACGGCACAGCCCGCACCGACGCCCCCCGGATCGCCGGCCGCTGCCCCGCAGGCAAGCGCCGCTTCCGGCAATGA CGCTGCGCCCCTGCCGGACTCCGGCCCGGAAACAGACACGCCCTTCGATCCCGAAGCGCTTGCCGCAGACCTCGACACAC TGCTGGCCGCCGTCAACCCCGCCCCGGACATTCCGGGCACGGGGCAACCCGCCGTTGCGAAGACCGGCGCCGAGGAACTG GACTTTGACCTGGATGCCCTGCTGGCCGCCGCGGATGCGGAAGAACGCGAAAGCGCGCACACAGTGGCAGAAAAGACGGA CACCCCCGCAGGCAATACCGCGCAAGTTGCGGAGCAACCCGCAGCACAGCCCGAACAGGTTGCTCCGGCCGCCCCTGCGG CTACAAAAGAAGCTCCGCAAACGACAGAACTGCCTGTTACAGAGCCACCCGCACAGCCGGAAGCCACAGCCCAGCCCATG ACGCAGGACGCGACCTCCGGCGCGCCCCAGGCCCCGCTTTCAGATCTGGATATTGACTCCCTGCTGGCCGAAGCCGCCGG AGGCGCAGCAGCCGCTACCGCCCCGCTCCCGGGCGTGACGGACGCGACGGACGCCGAAGCCCCGCCCGCCCGGCAGACGG AAGAAACGCTCCCCACCGAGCAGCCCCACATGGGCGTGAGCGAAGAAGGCGTGGATTCTCCTGACATTGCTGGCAATTAT GACCATACAGAAACCATAGACACCATAAGCACAGCGGCGGCCACTGCAAATGCCGCGGAGGCCCCGGCCGAAACGCCCTA TACGGAAAATACGGAAAAACCGGCAGCCACAGAGAGCACACATGTTGCCGATGCGGCCGATGCAGCAGCTGTAGCAGATC CTCCCCCTGCCCCGGTCGCCGACGTACTTGCTGAACGCCTGGACCAGTGCGAGGAACTGCTGCGCCAGGCCGAAGAGCGC GCGAGCGCTCTGGAGTCAGCCATGGCTGAAGCCCGTGAAGCGGCAGAACAGGCCCGCGCCCTGGCGGATGAAGCGCGCGA GGCAGCCGGCCTGGCCCAGGCAAGCGCCGAGGAAGCGCAAAATACGGCCCGCGCTGTTGGCAGAGATTCTGCCCGCGCTG TAGACGAGGCCCTGCAAGCAGCCCGCAATGCAGAAGAAACAGCCGGGGCCGCCATGCAGCAAGGCAGCGCCGGTCCGGAT ACTGCCGAGGCACTGGCCGAAGCCCTTTTTGAACCGGGCCATCCCCTGCACCAACGCTTCATGGACGCCATACAGGCTGC CGCTGCCCAAGCCGCGCAGCAGGCCGCACAATCGGCGCTTCAGGAGACTGCCGGGCAGGCTCCTGCTTCCGGCCCCAGCG AAGACCCCGCCCTGGCAGAGCGTCTGGACAATGCAGACCTGATGTTGCGCGGCACTTCAGCCCGCCTGGATTCCATAGAA GAACGGCTGGACGGTCTTGAACCCCGCTTCAACGAGCAGGTGGAAAAATCTGCGGCAGCCGCGGCAGCCCGCATATTACG CGAAGAAATCGCCCGTCTGCTGGAAAGCGAGGCATAG
Upstream 100 bases:
>100_bases CTCCGGCTGGCACGGCCAGCGGCCACCATACCGCATACTGGCGACAAATCCCGCCCTTCCGGCCCCGAAGCCGATTGTTC CTAACCCCATGAGGTCGCGC
Downstream 100 bases:
>100_bases CAAAGAGATCTGCGCTCGGGCAAAAGAGCGGACAATCATTGGCAATGGCAATCTGCCCGGTGCGGTTTTTTGCAAAAATT CGCACCGTAAAGCGTGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 758; Mature: 757
Protein sequence:
>758_residues MAAQNAHENTEEIIDLTELIEKGEVPATDEAAPAPTDDDQSGLHSHMRSLNEEGRQADAEIDDLLAQMEARDDSEDIPAE GEMPPADTDNIAAPQDDEPAFSGTGVAPDGHIVDPNEKLHMPGMGDVDNLLNSLDIPPQPPQRSTAAPSPRNTDEAVDQM LDGLTGAACPTAARPETAANGTHADTPDVDELLAAGTVPEPVISDELEALLSASDPAAWHAAPAHAGKAANDAPGAATEE RPTAQPAPTPPGSPAAAPQASAASGNDAAPLPDSGPETDTPFDPEALAADLDTLLAAVNPAPDIPGTGQPAVAKTGAEEL DFDLDALLAAADAEERESAHTVAEKTDTPAGNTAQVAEQPAAQPEQVAPAAPAATKEAPQTTELPVTEPPAQPEATAQPM TQDATSGAPQAPLSDLDIDSLLAEAAGGAAAATAPLPGVTDATDAEAPPARQTEETLPTEQPHMGVSEEGVDSPDIAGNY DHTETIDTISTAAATANAAEAPAETPYTENTEKPAATESTHVADAADAAAVADPPPAPVADVLAERLDQCEELLRQAEER ASALESAMAEAREAAEQARALADEAREAAGLAQASAEEAQNTARAVGRDSARAVDEALQAARNAEETAGAAMQQGSAGPD TAEALAEALFEPGHPLHQRFMDAIQAAAAQAAQQAAQSALQETAGQAPASGPSEDPALAERLDNADLMLRGTSARLDSIE ERLDGLEPRFNEQVEKSAAAAAARILREEIARLLESEA
Sequences:
>Translated_758_residues MAAQNAHENTEEIIDLTELIEKGEVPATDEAAPAPTDDDQSGLHSHMRSLNEEGRQADAEIDDLLAQMEARDDSEDIPAE GEMPPADTDNIAAPQDDEPAFSGTGVAPDGHIVDPNEKLHMPGMGDVDNLLNSLDIPPQPPQRSTAAPSPRNTDEAVDQM LDGLTGAACPTAARPETAANGTHADTPDVDELLAAGTVPEPVISDELEALLSASDPAAWHAAPAHAGKAANDAPGAATEE RPTAQPAPTPPGSPAAAPQASAASGNDAAPLPDSGPETDTPFDPEALAADLDTLLAAVNPAPDIPGTGQPAVAKTGAEEL DFDLDALLAAADAEERESAHTVAEKTDTPAGNTAQVAEQPAAQPEQVAPAAPAATKEAPQTTELPVTEPPAQPEATAQPM TQDATSGAPQAPLSDLDIDSLLAEAAGGAAAATAPLPGVTDATDAEAPPARQTEETLPTEQPHMGVSEEGVDSPDIAGNY DHTETIDTISTAAATANAAEAPAETPYTENTEKPAATESTHVADAADAAAVADPPPAPVADVLAERLDQCEELLRQAEER ASALESAMAEAREAAEQARALADEAREAAGLAQASAEEAQNTARAVGRDSARAVDEALQAARNAEETAGAAMQQGSAGPD TAEALAEALFEPGHPLHQRFMDAIQAAAAQAAQQAAQSALQETAGQAPASGPSEDPALAERLDNADLMLRGTSARLDSIE ERLDGLEPRFNEQVEKSAAAAAARILREEIARLLESEA >Mature_757_residues AAQNAHENTEEIIDLTELIEKGEVPATDEAAPAPTDDDQSGLHSHMRSLNEEGRQADAEIDDLLAQMEARDDSEDIPAEG EMPPADTDNIAAPQDDEPAFSGTGVAPDGHIVDPNEKLHMPGMGDVDNLLNSLDIPPQPPQRSTAAPSPRNTDEAVDQML DGLTGAACPTAARPETAANGTHADTPDVDELLAAGTVPEPVISDELEALLSASDPAAWHAAPAHAGKAANDAPGAATEER PTAQPAPTPPGSPAAAPQASAASGNDAAPLPDSGPETDTPFDPEALAADLDTLLAAVNPAPDIPGTGQPAVAKTGAEELD FDLDALLAAADAEERESAHTVAEKTDTPAGNTAQVAEQPAAQPEQVAPAAPAATKEAPQTTELPVTEPPAQPEATAQPMT QDATSGAPQAPLSDLDIDSLLAEAAGGAAAATAPLPGVTDATDAEAPPARQTEETLPTEQPHMGVSEEGVDSPDIAGNYD HTETIDTISTAAATANAAEAPAETPYTENTEKPAATESTHVADAADAAAVADPPPAPVADVLAERLDQCEELLRQAEERA SALESAMAEAREAAEQARALADEAREAAGLAQASAEEAQNTARAVGRDSARAVDEALQAARNAEETAGAAMQQGSAGPDT AEALAEALFEPGHPLHQRFMDAIQAAAAQAAQQAAQSALQETAGQAPASGPSEDPALAERLDNADLMLRGTSARLDSIEE RLDGLEPRFNEQVEKSAAAAAARILREEIARLLESEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77343; Mature: 77212
Theoretical pI: Translated: 3.72; Mature: 3.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQNAHENTEEIIDLTELIEKGEVPATDEAAPAPTDDDQSGLHSHMRSLNEEGRQADAE CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IDDLLAQMEARDDSEDIPAEGEMPPADTDNIAAPQDDEPAFSGTGVAPDGHIVDPNEKLH HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC MPGMGDVDNLLNSLDIPPQPPQRSTAAPSPRNTDEAVDQMLDGLTGAACPTAARPETAAN CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC GTHADTPDVDELLAAGTVPEPVISDELEALLSASDPAAWHAAPAHAGKAANDAPGAATEE CCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHCCCHHHCCCCCCCCCCCCCCC RPTAQPAPTPPGSPAAAPQASAASGNDAAPLPDSGPETDTPFDPEALAADLDTLLAAVNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC APDIPGTGQPAVAKTGAEELDFDLDALLAAADAEERESAHTVAEKTDTPAGNTAQVAEQP CCCCCCCCCCHHHHCCHHHHCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHCC AAQPEQVAPAAPAATKEAPQTTELPVTEPPAQPEATAQPMTQDATSGAPQAPLSDLDIDS CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHH LLAEAAGGAAAATAPLPGVTDATDAEAPPARQTEETLPTEQPHMGVSEEGVDSPDIAGNY HHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC DHTETIDTISTAAATANAAEAPAETPYTENTEKPAATESTHVADAADAAAVADPPPAPVA CCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHH DVLAERLDQCEELLRQAEERASALESAMAEAREAAEQARALADEAREAAGLAQASAEEAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTARAVGRDSARAVDEALQAARNAEETAGAAMQQGSAGPDTAEALAEALFEPGHPLHQRF HHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH MDAIQAAAAQAAQQAAQSALQETAGQAPASGPSEDPALAERLDNADLMLRGTSARLDSIE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEECCHHHHHHHH ERLDGLEPRFNEQVEKSAAAAAARILREEIARLLESEA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAQNAHENTEEIIDLTELIEKGEVPATDEAAPAPTDDDQSGLHSHMRSLNEEGRQADAE CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IDDLLAQMEARDDSEDIPAEGEMPPADTDNIAAPQDDEPAFSGTGVAPDGHIVDPNEKLH HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC MPGMGDVDNLLNSLDIPPQPPQRSTAAPSPRNTDEAVDQMLDGLTGAACPTAARPETAAN CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC GTHADTPDVDELLAAGTVPEPVISDELEALLSASDPAAWHAAPAHAGKAANDAPGAATEE CCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHCCCHHHCCCCCCCCCCCCCCC RPTAQPAPTPPGSPAAAPQASAASGNDAAPLPDSGPETDTPFDPEALAADLDTLLAAVNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC APDIPGTGQPAVAKTGAEELDFDLDALLAAADAEERESAHTVAEKTDTPAGNTAQVAEQP CCCCCCCCCCHHHHCCHHHHCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHCC AAQPEQVAPAAPAATKEAPQTTELPVTEPPAQPEATAQPMTQDATSGAPQAPLSDLDIDS CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHH LLAEAAGGAAAATAPLPGVTDATDAEAPPARQTEETLPTEQPHMGVSEEGVDSPDIAGNY HHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC DHTETIDTISTAAATANAAEAPAETPYTENTEKPAATESTHVADAADAAAVADPPPAPVA CCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHH DVLAERLDQCEELLRQAEERASALESAMAEAREAAEQARALADEAREAAGLAQASAEEAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTARAVGRDSARAVDEALQAARNAEETAGAAMQQGSAGPDTAEALAEALFEPGHPLHQRF HHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH MDAIQAAAAQAAQQAAQSALQETAGQAPASGPSEDPALAERLDNADLMLRGTSARLDSIE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEECCHHHHHHHH ERLDGLEPRFNEQVEKSAAAAAARILREEIARLLESEA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA