Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220905163

Identifier: 220905163

GI number: 220905163

Start: 2290328

End: 2290630

Strand: Direct

Name: 220905163

Synonym: Ddes_1901

Alternate gene names: NA

Gene position: 2290328-2290630 (Clockwise)

Preceding gene: 220905162

Following gene: 220905164

Centisome position: 79.71

GC content: 55.45

Gene sequence:

>303_bases
ATGATTGTTCTGGCCAATACCATGAGCGCCGTTGCCATGATTCTCGGCTCACTGCTGAACCTGTATTTCTGGATAGTCAT
CATCGCGGCCGTGCTTACCTGGGTGCGGCCCGACCCGTATAATCCCATAGTGCGCACCCTGCGCGCCCTCACGGAACCCG
TGTTTTACCGTGTGCGCAAGTGGCTGCCTTTTACCTACACCACCGGCATGGACTTTTCTCCGGTGGTGGTGCTGCTGAGC
ATTGAGCTTTTCAACCGCATTGTGGTTGCCTCTCTTGCCCAGTACGCGCTTGCCATTCAATAA

Upstream 100 bases:

>100_bases
CGGACTTTGCCGCCCCAAAAGGCCGAGGCGTGAGATCAGGCCCCGCCGGACCTCCCCGAACGTATTTTTTTGACACAAAG
ACCGCCATTCTGGAGGGCGC

Downstream 100 bases:

>100_bases
CCCTGGCTTCCTCGCGGGCGTCCGCGTTCGAACATCTAACAATGGAGATTTCTTATGGATCAGCATGAACTAGAACTACT
AAACAAGTATGCGGCTACTG

Product: hypothetical protein

Products: NA

Alternate protein names: YGGT Family Protein; Integral Membrane Protein; Riboflavin Synthase Alpha Subunit

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MIVLANTMSAVAMILGSLLNLYFWIVIIAAVLTWVRPDPYNPIVRTLRALTEPVFYRVRKWLPFTYTTGMDFSPVVVLLS
IELFNRIVVASLAQYALAIQ

Sequences:

>Translated_100_residues
MIVLANTMSAVAMILGSLLNLYFWIVIIAAVLTWVRPDPYNPIVRTLRALTEPVFYRVRKWLPFTYTTGMDFSPVVVLLS
IELFNRIVVASLAQYALAIQ
>Mature_100_residues
MIVLANTMSAVAMILGSLLNLYFWIVIIAAVLTWVRPDPYNPIVRTLRALTEPVFYRVRKWLPFTYTTGMDFSPVVVLLS
IELFNRIVVASLAQYALAIQ

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11362; Mature: 11362

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLANTMSAVAMILGSLLNLYFWIVIIAAVLTWVRPDPYNPIVRTLRALTEPVFYRVRK
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
WLPFTYTTGMDFSPVVVLLSIELFNRIVVASLAQYALAIQ
HCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVLANTMSAVAMILGSLLNLYFWIVIIAAVLTWVRPDPYNPIVRTLRALTEPVFYRVRK
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
WLPFTYTTGMDFSPVVVLLSIELFNRIVVASLAQYALAIQ
HCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA