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The map label for this gene is cbbZ [H]

Identifier: 220905162

GI number: 220905162

Start: 2289595

End: 2290260

Strand: Direct

Name: cbbZ [H]

Synonym: Ddes_1900

Alternate gene names: 220905162

Gene position: 2289595-2290260 (Clockwise)

Preceding gene: 220905161

Following gene: 220905163

Centisome position: 79.68

GC content: 57.66

Gene sequence:

>666_bases
ATGAGTGTACTGTTTCCCCACGGCCTTGCAGGAGTCATCTTTGACTGCGATGGCGTGATGATAGATTCGCGCGAATCCAA
CAATATTTTCTACAATCGCGTTCTTGAGCACTTTGATTTACCGCCCATGACGCCGGAGCAGGAAGAATACTGCTTTATGG
CTACAGCCGTACAGTCCCTGCTGCATATTGTGCCGCCGCACCTTCACGGCCAGATAGAGTATGTAACACGCGAGGTGGTC
AACTACCGGCGCGACATCTTGCCCATGCTGCGCCTGCAGCCGGGATTTACCGAATTTATTGATGACCTTCGCGACCGCCG
TGTGCGCATGGCCGTGCATACCAACCGCAGGTTTGAGGGAATACAAACGGTTCTGGACATTTTCGGCCTGCCCACCTATT
TTGATCCTGTGGTCGCGGCCGATACGGCAGCGCCCAAACCGTCTCCCGAAGGCACACGGCACATCTGTTCCGCCTGGGGA
GTTTCGCCCGAAACCGTGCTTTTTGTGGGCGACAGCGAACATGACAAGGAAGCGGCCCGGGGGGCGGGCGTAGTATTTGC
GGCATTTGGCAGCGGGCCTCTCCGGGGGCAGATAACAGTCACGGATTATGCAGGCCTGCACGCCGCGCTGGACCGGACTT
TGCCGCCCCAAAAGGCCGAGGCGTGA

Upstream 100 bases:

>100_bases
AGGCCCGTGCCCCGGCATGGCGGATTCTCGGCCGCAAACAACCCACCGGTTCTCCGCCTCTGGATGTCGAGCGCCTGTGG
CTCGTATGGAGGCCCACATC

Downstream 100 bases:

>100_bases
GATCAGGCCCCGCCGGACCTCCCCGAACGTATTTTTTTGACACAAAGACCGCCATTCTGGAGGGCGCATGATTGTTCTGG
CCAATACCATGAGCGCCGTT

Product: HAD-superfamily hydrolase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSVLFPHGLAGVIFDCDGVMIDSRESNNIFYNRVLEHFDLPPMTPEQEEYCFMATAVQSLLHIVPPHLHGQIEYVTREVV
NYRRDILPMLRLQPGFTEFIDDLRDRRVRMAVHTNRRFEGIQTVLDIFGLPTYFDPVVAADTAAPKPSPEGTRHICSAWG
VSPETVLFVGDSEHDKEAARGAGVVFAAFGSGPLRGQITVTDYAGLHAALDRTLPPQKAEA

Sequences:

>Translated_221_residues
MSVLFPHGLAGVIFDCDGVMIDSRESNNIFYNRVLEHFDLPPMTPEQEEYCFMATAVQSLLHIVPPHLHGQIEYVTREVV
NYRRDILPMLRLQPGFTEFIDDLRDRRVRMAVHTNRRFEGIQTVLDIFGLPTYFDPVVAADTAAPKPSPEGTRHICSAWG
VSPETVLFVGDSEHDKEAARGAGVVFAAFGSGPLRGQITVTDYAGLHAALDRTLPPQKAEA
>Mature_220_residues
SVLFPHGLAGVIFDCDGVMIDSRESNNIFYNRVLEHFDLPPMTPEQEEYCFMATAVQSLLHIVPPHLHGQIEYVTREVVN
YRRDILPMLRLQPGFTEFIDDLRDRRVRMAVHTNRRFEGIQTVLDIFGLPTYFDPVVAADTAAPKPSPEGTRHICSAWGV
SPETVLFVGDSEHDKEAARGAGVVFAAFGSGPLRGQITVTDYAGLHAALDRTLPPQKAEA

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 24589; Mature: 24458

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLFPHGLAGVIFDCDGVMIDSRESNNIFYNRVLEHFDLPPMTPEQEEYCFMATAVQSL
CCEECCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LHIVPPHLHGQIEYVTREVVNYRRDILPMLRLQPGFTEFIDDLRDRRVRMAVHTNRRFEG
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEEEECCCCHHHH
IQTVLDIFGLPTYFDPVVAADTAAPKPSPEGTRHICSAWGVSPETVLFVGDSEHDKEAAR
HHHHHHHHCCCCHHCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHC
GAGVVFAAFGSGPLRGQITVTDYAGLHAALDRTLPPQKAEA
CCCEEEEEECCCCCCEEEEEECCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SVLFPHGLAGVIFDCDGVMIDSRESNNIFYNRVLEHFDLPPMTPEQEEYCFMATAVQSL
CEECCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LHIVPPHLHGQIEYVTREVVNYRRDILPMLRLQPGFTEFIDDLRDRRVRMAVHTNRRFEG
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEEEECCCCHHHH
IQTVLDIFGLPTYFDPVVAADTAAPKPSPEGTRHICSAWGVSPETVLFVGDSEHDKEAAR
HHHHHHHHCCCCHHCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHC
GAGVVFAAFGSGPLRGQITVTDYAGLHAALDRTLPPQKAEA
CCCEEEEEECCCCCCEEEEEECCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA