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The map label for this gene is nuoC [C]

Identifier: 220905146

GI number: 220905146

Start: 2272917

End: 2273453

Strand: Direct

Name: nuoC [C]

Synonym: Ddes_1884

Alternate gene names: 220905146

Gene position: 2272917-2273453 (Clockwise)

Preceding gene: 220905145

Following gene: 220905147

Centisome position: 79.1

GC content: 59.03

Gene sequence:

>537_bases
ATGCAAGAGACCATTAACGGCAACGCCAAAGTCATCGAGGACCTTTCCGCCCTCTGCACCGAGGCCGACGCCATCCACCA
CAGTACCGACAGTTTCGGCAATGCCTTCCACTGGTTCCGGCTGGGTACGCCGCGCATGCTCACCCGCGGCGCGGAAATAC
TGCGCCAGGCCGATGCCCGTCTGGCCATGGTGACGGCCTATAACCGCCGCCAGCTCAGCGAGCCCATGCAGGAAGTGTGT
TACCACTTTGAACTGGATGGTGTTGTTTACAACATGACCGTGACCCTTAACGGCGAGTGGCCCACCGTACCCTCCATCAC
GCCGCTCTTTGCCAACGCGGACTGGCACGAACGGGAAATGATGGAACTTTACGGCATTCAGGTCACGGGGCAGCCCAATC
CCCGCCGGCTCTTTCTTGATGAAGAGCTGGACGCGGGCATTCTCAACGAAGCCGTGCCTCTTTCCATCATGATGAACGGC
GCCTGTACCACCGACCTGTGGGAACGCATCCTCAAGGATAAGGAGAACCAGTCATGA

Upstream 100 bases:

>100_bases
AACGCCTGCCTGCTGCCGGAACCGGGCGAAACCCCGGTGGAAAAGGCCGTAACCTCGGCGGCTCCCACAAAAGATTAGCG
GTCTGCACCGCGGAGAACAT

Downstream 100 bases:

>100_bases
CCAGCACCTTCACCATGCCTCTCGGGCCGGTACACGTGGCCCTTGAGGAACCGGTATACTTCCACCTGACGGTGGACGGT
GAAACCGTGCGTCACGTGGA

Product: NADH dehydrogenase (ubiquinone) 30 kDa subunit

Products: NAD+; ubiquinol [C]

Alternate protein names: Carbon Monoxide-Induced Hydrogenase Subunit CooU; Carbon Monoxide-Induced Hydrogenase CooU Subunit; Hydrogenase Subunit CooU

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MQETINGNAKVIEDLSALCTEADAIHHSTDSFGNAFHWFRLGTPRMLTRGAEILRQADARLAMVTAYNRRQLSEPMQEVC
YHFELDGVVYNMTVTLNGEWPTVPSITPLFANADWHEREMMELYGIQVTGQPNPRRLFLDEELDAGILNEAVPLSIMMNG
ACTTDLWERILKDKENQS

Sequences:

>Translated_178_residues
MQETINGNAKVIEDLSALCTEADAIHHSTDSFGNAFHWFRLGTPRMLTRGAEILRQADARLAMVTAYNRRQLSEPMQEVC
YHFELDGVVYNMTVTLNGEWPTVPSITPLFANADWHEREMMELYGIQVTGQPNPRRLFLDEELDAGILNEAVPLSIMMNG
ACTTDLWERILKDKENQS
>Mature_178_residues
MQETINGNAKVIEDLSALCTEADAIHHSTDSFGNAFHWFRLGTPRMLTRGAEILRQADARLAMVTAYNRRQLSEPMQEVC
YHFELDGVVYNMTVTLNGEWPTVPSITPLFANADWHEREMMELYGIQVTGQPNPRRLFLDEELDAGILNEAVPLSIMMNG
ACTTDLWERILKDKENQS

Specific function: Ndh-1 Shuttles Electrons From NADH, Via Fmn And Iron- Sulfur (Fe-S) Centers, To Quinones In The Respiratory Chain. The Immediate Electron Acceptor For The Enzyme In This Species Is Believed To Be Ubiquinone. Couples The Redox Reaction To Proton Translocat

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.99.5 [C]

Molecular weight: Translated: 20231; Mature: 20231

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQETINGNAKVIEDLSALCTEADAIHHSTDSFGNAFHWFRLGTPRMLTRGAEILRQADAR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCC
LAMVTAYNRRQLSEPMQEVCYHFELDGVVYNMTVTLNGEWPTVPSITPLFANADWHEREM
EEEEEHHHHHHHHHHHHHHHHEEEECCEEEEEEEEECCCCCCCCCCCCEECCCCHHHHHH
MELYGIQVTGQPNPRRLFLDEELDAGILNEAVPLSIMMNGACTTDLWERILKDKENQS
HHHHCEEEECCCCCCEEEECCCCCCCHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQETINGNAKVIEDLSALCTEADAIHHSTDSFGNAFHWFRLGTPRMLTRGAEILRQADAR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCC
LAMVTAYNRRQLSEPMQEVCYHFELDGVVYNMTVTLNGEWPTVPSITPLFANADWHEREM
EEEEEHHHHHHHHHHHHHHHHEEEECCEEEEEEEEECCCCCCCCCCCCEECCCCHHHHHH
MELYGIQVTGQPNPRRLFLDEELDAGILNEAVPLSIMMNGACTTDLWERILKDKENQS
HHHHCEEEECCCCCCEEEECCCCCCCHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Iron [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; ubiquinone [C]

Specific reaction: NADH + ubiquinone = NAD+ + ubiquinol [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA