Click here to switch to the map view.

The map label for this gene is 220905128

Identifier: 220905128

GI number: 220905128

Start: 2249283

End: 2250338

Strand: Reverse

Name: 220905128

Synonym: Ddes_1866

Alternate gene names: NA

Gene position: 2250338-2249283 (Counterclockwise)

Preceding gene: 220905129

Following gene: 220905127

Centisome position: 78.32

GC content: 63.16

Gene sequence:

>1056_bases
ATGCGTATTGCTTTTGCCAGCGGCAAGGGGGGCGCGGGAAAAACCACGGTAGCGGCCTCACTGGCTGTAACATGGCCCGC
CTCCTGCATGTTGGTGGACGCGGATGTGGAGGCGCCCAACCTGCATCTTTTCCTGCGCCCGCAACTGACAGCGCCCGAGA
GCGTTTTTTTGCCCGTGCCTGAGTTGAACAAGGAAAAGTGCACGGCCTGCGGAGCCTGTGGAGAAATGTGCGCCTATAAG
GCCATTGCGATCCTTGGCGGCAAGCCAGTCATTTTTTCAGACATGTGCCACGGCTGTGGCGGCTGTTTTGCAGTATGCCC
GTCCGGCGCGCTGGACGAAGGGCGGCGCGAACTTGGCAGCCTGCAGTACGGTGTGTGGGGCGTGGCCCAGGGTTGGGAAA
ATACCCTGCTCATGGGCAGAAGCCGTGTGGGTGAAGCCATGTCGCCGCCCCTGCTGCGCGCACTCGAAAAAGCGCTTGAT
GCCCGGTTGGGCGCTCCGTCGGGCGTGAGTGCCGTATCCGCTCCCGTTACGGACTCCGCTTCGGCTGCCGTGCCGCCGGA
GACGCCTTCAGATGTGCTGCCGGATGTTCTGATAGACGCGCCTCCCGGCGTGAGCTGTCCGGCCATGACCACAGCCCGCC
TGGCGGACGTTCTTGTGCTGGTGGCCGAATCAACCCCTTTTGGCATGTATGATTTTACGCTGGCCCATCAGGCATTCAGC
CATCTGGGCATGCCGCTGGCTGTGGTGATGAACCGCGTGGGCATGCCGGGCAACGAGTCCGGCGATGAAATTCTTGACAG
CTACTGCGCGGAAAAAGCTCTGCCACTGCTGGCCCGCCTGCCTTTTGACCGTCAGGCTGCCGAAGATTACGCGCGCGGGC
AGTTGCCGCCTGTGGGGCAGAGTGCCGGTGCACCGGCCTGGCGGCGGCGGTTTGAAACTCTTGGCAAAGACCTGCGGCGA
TGGGCTGCCGCAACGCAAGGCCGCGCAGAAGGAGCGCAGGTTTCCGGAATTTGCGGCGAATCCGCCGGCAGAGGGGGAAA
GCCGTGCGCGAAATAG

Upstream 100 bases:

>100_bases
AGTGTACCAGGATATGGACGGCCGCAGCGTAGGCGAAGCCGTACGTATATATACAAGTGGGGCGGCCAGCCCGGCCCAGG
CTCCCAACAGGTAGGGCGGC

Downstream 100 bases:

>100_bases
TTGTTATCAGCGGCAAGGGCGGAACAGGAAAAACCACGGTCTGCGCTTCGCTGGCGGCGCTGGCTGCACGCGGGGGCGAA
AAGCCCGTGCTGTGCGACCT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MRIAFASGKGGAGKTTVAASLAVTWPASCMLVDADVEAPNLHLFLRPQLTAPESVFLPVPELNKEKCTACGACGEMCAYK
AIAILGGKPVIFSDMCHGCGGCFAVCPSGALDEGRRELGSLQYGVWGVAQGWENTLLMGRSRVGEAMSPPLLRALEKALD
ARLGAPSGVSAVSAPVTDSASAAVPPETPSDVLPDVLIDAPPGVSCPAMTTARLADVLVLVAESTPFGMYDFTLAHQAFS
HLGMPLAVVMNRVGMPGNESGDEILDSYCAEKALPLLARLPFDRQAAEDYARGQLPPVGQSAGAPAWRRRFETLGKDLRR
WAAATQGRAEGAQVSGICGESAGRGGKPCAK

Sequences:

>Translated_351_residues
MRIAFASGKGGAGKTTVAASLAVTWPASCMLVDADVEAPNLHLFLRPQLTAPESVFLPVPELNKEKCTACGACGEMCAYK
AIAILGGKPVIFSDMCHGCGGCFAVCPSGALDEGRRELGSLQYGVWGVAQGWENTLLMGRSRVGEAMSPPLLRALEKALD
ARLGAPSGVSAVSAPVTDSASAAVPPETPSDVLPDVLIDAPPGVSCPAMTTARLADVLVLVAESTPFGMYDFTLAHQAFS
HLGMPLAVVMNRVGMPGNESGDEILDSYCAEKALPLLARLPFDRQAAEDYARGQLPPVGQSAGAPAWRRRFETLGKDLRR
WAAATQGRAEGAQVSGICGESAGRGGKPCAK
>Mature_351_residues
MRIAFASGKGGAGKTTVAASLAVTWPASCMLVDADVEAPNLHLFLRPQLTAPESVFLPVPELNKEKCTACGACGEMCAYK
AIAILGGKPVIFSDMCHGCGGCFAVCPSGALDEGRRELGSLQYGVWGVAQGWENTLLMGRSRVGEAMSPPLLRALEKALD
ARLGAPSGVSAVSAPVTDSASAAVPPETPSDVLPDVLIDAPPGVSCPAMTTARLADVLVLVAESTPFGMYDFTLAHQAFS
HLGMPLAVVMNRVGMPGNESGDEILDSYCAEKALPLLARLPFDRQAAEDYARGQLPPVGQSAGAPAWRRRFETLGKDLRR
WAAATQGRAEGAQVSGICGESAGRGGKPCAK

Specific function: Unknown

COG id: COG1149

COG function: function code C; MinD superfamily P-loop ATPase containing an inserted ferredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 36453; Mature: 36453

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAFASGKGGAGKTTVAASLAVTWPASCMLVDADVEAPNLHLFLRPQLTAPESVFLPVP
CEEEEECCCCCCCCHHHHEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCEEECCC
ELNKEKCTACGACGEMCAYKAIAILGGKPVIFSDMCHGCGGCFAVCPSGALDEGRRELGS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCHHHCCCCCCHHHHHHHHHC
LQYGVWGVAQGWENTLLMGRSRVGEAMSPPLLRALEKALDARLGAPSGVSAVSAPVTDSA
HHHCHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCC
SAAVPPETPSDVLPDVLIDAPPGVSCPAMTTARLADVLVLVAESTPFGMYDFTLAHQAFS
CCCCCCCCCHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
HLGMPLAVVMNRVGMPGNESGDEILDSYCAEKALPLLARLPFDRQAAEDYARGQLPPVGQ
HCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
SAGAPAWRRRFETLGKDLRRWAAATQGRAEGAQVSGICGESAGRGGKPCAK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIAFASGKGGAGKTTVAASLAVTWPASCMLVDADVEAPNLHLFLRPQLTAPESVFLPVP
CEEEEECCCCCCCCHHHHEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCEEECCC
ELNKEKCTACGACGEMCAYKAIAILGGKPVIFSDMCHGCGGCFAVCPSGALDEGRRELGS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCHHHCCCCCCHHHHHHHHHC
LQYGVWGVAQGWENTLLMGRSRVGEAMSPPLLRALEKALDARLGAPSGVSAVSAPVTDSA
HHHCHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCC
SAAVPPETPSDVLPDVLIDAPPGVSCPAMTTARLADVLVLVAESTPFGMYDFTLAHQAFS
CCCCCCCCCHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
HLGMPLAVVMNRVGMPGNESGDEILDSYCAEKALPLLARLPFDRQAAEDYARGQLPPVGQ
HCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
SAGAPAWRRRFETLGKDLRRWAAATQGRAEGAQVSGICGESAGRGGKPCAK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]