| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905109
Identifier: 220905109
GI number: 220905109
Start: 2227590
End: 2228831
Strand: Direct
Name: 220905109
Synonym: Ddes_1846
Alternate gene names: NA
Gene position: 2227590-2228831 (Clockwise)
Preceding gene: 220905106
Following gene: 220905110
Centisome position: 77.52
GC content: 51.45
Gene sequence:
>1242_bases ATGAAAAAATTGCTTATTCTTGGTGCTGGCGCTGGTGGAACCATGATAGCCACGAAGATGAGAAAACTGTTAAGCGAAAG AGAGTGGCAAATCACTCTTATAGATAGAGACCCTGTCCATCATTATCAGCCGGGCTGGCTGCTGGTTCCGTTTGGTGTAG ACACGCCGCAGGGCTGCGTTCGCCCCAAAAAAGATTTCATCAGCCGCGGCGTCAATTTTGTCATCGACACCATCAATTCC CTTGATCCCATCGCCCGTAAGGTTGAATGCAAAAACAGCACGCACACCTACGACTGGATCATCATTGCAACAGGCGCAAG AATTGCCCCCGATGAAGTGCCCGGCCTTCTGGATGACTGGGGCGGCAAAATCCACAATTTCTACACCCATGACGGTGCAG AAGCCCTTTACGGCAAGATGAAGCATTTCAAAAAGGGAAGACTGGTTCTTCATATTTGCGAAACGCCCATCAAGTGTCCT GTCGCGCCGCTGGAATTTGTGTACATGGCTGACTGGTATCTGCAGAAAATGGGCGTGCGTGACAACGTGGAAATTGAGCT TGTCACTCCCCTTACGGGCGCATTTACCAAACCTGTGGCAAACAACATCCTTGGCGCGCTTTGCGAGCAAAAGGGCATCA AGGTCACCACCAACTGGACTGTGGACAGCGTTGAAGCCGACCGCTCTGTTATCACCTCGGTCACCGGCGACGAAATCAAC TATGACCTGCTGGTGACCATTCCCCCCAACCTGGGCCAGGAATTTCTTATTGAGTCCGAAGTGTCCGACGTGACCGGCTA CGTTGATACGGACAAGGAACTGTTGCGGGCAAAGAAATTTGAAAACATGTACATCATTGGCGATGCCACCAACGTTCCGG CCTCCAAGGCAGGCTCTGTGGCCCACTTTGAAGTGGATGTCATCGCCCAGAACATGATGTCCGACATTGAAGGCACAGAC AACTACTACAAGTTTGACGGGCACACCAACTGCTTTATTGTTACGGGCTTTGAAAAGGCGTCGCTCATTGACTTCAGTTA TGCCATCGAGCCGCTGCCGGGCATGTTCCCGCTCCCCGGGGTTGGCCCGTTTGAACTGCTGGGCGAAAGCCACATAAACT ACTGGGGCAAACTCATGTTCAAGTGGGTATATTACAACCTTATGCTGAAGGGCCACGAGCTGCCGTTTGAACCCAACATG TATCTTGCAGGCAAAGACACCTCCTTGCTGAGAAACAAGTAG
Upstream 100 bases:
>100_bases ACCCCACAGCTAGGATATCCGCCGTGCCAATATCGGTCATCCATAGTGGGTGAGGCTTGTTCAAGACAAACCGCTCTATA TCTCAATTGGAGTCAACTAG
Downstream 100 bases:
>100_bases GCTGGGGGACGCTATGACACCTGAAGAAAAAATTCTCGAACGGCTGAATGCCATTGAAGACAGGCTTACTGACCTTCAAG CTGCCAAAGAAAACAGCAGC
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; SulfideQuinone Oxidoreductase; Sulfide Dehydrogenase Flavoprotein Subunit; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Twin-Arginine Translocation Pathway Signal; Flavoprotein Reductase; Sulfide Dehydrogenase; Sulfide-Quinone Reductase; NADH Dehydrogenase FAD-Containing Subunit; Sulfide Quinone Oxidoreductase-Like Protein; Flavoprotein Reductase Conjectural; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase Flavoprotein; Anti-Anti-Sigma Regulatory Factor; Sulfide Quinone-Rductase; Filamentous Hemagglutinin; Sulphide Quinone Reductase; NAD(Fad)-Dependent Dehydrogenase Protein; Oxidoreductase FAD-Dependent; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Oxidoreductase Family Protein; Flavoprotein Reductase-Like Protein; Oxidoreductase Pyridine Nucleotide-Disulphide Family; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; Pyridine Nucleotide-Disulphide Oxidoreductase Class-II; Sulfide-Quinone Oxidoreductase; Dehydrogenase; SulfideQuinone Reductase; NAD(FAD)-Dependent Dehydrogenase-Like Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family; Sulfide Dehydrogenase Related Protein; Dehydrogenase/Reductase
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MKKLLILGAGAGGTMIATKMRKLLSEREWQITLIDRDPVHHYQPGWLLVPFGVDTPQGCVRPKKDFISRGVNFVIDTINS LDPIARKVECKNSTHTYDWIIIATGARIAPDEVPGLLDDWGGKIHNFYTHDGAEALYGKMKHFKKGRLVLHICETPIKCP VAPLEFVYMADWYLQKMGVRDNVEIELVTPLTGAFTKPVANNILGALCEQKGIKVTTNWTVDSVEADRSVITSVTGDEIN YDLLVTIPPNLGQEFLIESEVSDVTGYVDTDKELLRAKKFENMYIIGDATNVPASKAGSVAHFEVDVIAQNMMSDIEGTD NYYKFDGHTNCFIVTGFEKASLIDFSYAIEPLPGMFPLPGVGPFELLGESHINYWGKLMFKWVYYNLMLKGHELPFEPNM YLAGKDTSLLRNK
Sequences:
>Translated_413_residues MKKLLILGAGAGGTMIATKMRKLLSEREWQITLIDRDPVHHYQPGWLLVPFGVDTPQGCVRPKKDFISRGVNFVIDTINS LDPIARKVECKNSTHTYDWIIIATGARIAPDEVPGLLDDWGGKIHNFYTHDGAEALYGKMKHFKKGRLVLHICETPIKCP VAPLEFVYMADWYLQKMGVRDNVEIELVTPLTGAFTKPVANNILGALCEQKGIKVTTNWTVDSVEADRSVITSVTGDEIN YDLLVTIPPNLGQEFLIESEVSDVTGYVDTDKELLRAKKFENMYIIGDATNVPASKAGSVAHFEVDVIAQNMMSDIEGTD NYYKFDGHTNCFIVTGFEKASLIDFSYAIEPLPGMFPLPGVGPFELLGESHINYWGKLMFKWVYYNLMLKGHELPFEPNM YLAGKDTSLLRNK >Mature_413_residues MKKLLILGAGAGGTMIATKMRKLLSEREWQITLIDRDPVHHYQPGWLLVPFGVDTPQGCVRPKKDFISRGVNFVIDTINS LDPIARKVECKNSTHTYDWIIIATGARIAPDEVPGLLDDWGGKIHNFYTHDGAEALYGKMKHFKKGRLVLHICETPIKCP VAPLEFVYMADWYLQKMGVRDNVEIELVTPLTGAFTKPVANNILGALCEQKGIKVTTNWTVDSVEADRSVITSVTGDEIN YDLLVTIPPNLGQEFLIESEVSDVTGYVDTDKELLRAKKFENMYIIGDATNVPASKAGSVAHFEVDVIAQNMMSDIEGTD NYYKFDGHTNCFIVTGFEKASLIDFSYAIEPLPGMFPLPGVGPFELLGESHINYWGKLMFKWVYYNLMLKGHELPFEPNM YLAGKDTSLLRNK
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI10864011, Length=394, Percent_Identity=27.6649746192893, Blast_Score=162, Evalue=7e-40, Organism=Caenorhabditis elegans, GI115534373, Length=347, Percent_Identity=25.3602305475504, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17539680, Length=428, Percent_Identity=24.7663551401869, Blast_Score=117, Evalue=8e-27, Organism=Drosophila melanogaster, GI24657386, Length=376, Percent_Identity=26.8617021276596, Blast_Score=128, Evalue=7e-30, Organism=Drosophila melanogaster, GI24657391, Length=376, Percent_Identity=26.8617021276596, Blast_Score=128, Evalue=7e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46262; Mature: 46262
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLILGAGAGGTMIATKMRKLLSEREWQITLIDRDPVHHYQPGWLLVPFGVDTPQGCV CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHCC RPKKDFISRGVNFVIDTINSLDPIARKVECKNSTHTYDWIIIATGARIAPDEVPGLLDDW CCCHHHHHCCCCEEEHHHHHHCHHHHHHCCCCCCCEEEEEEEECCCEECHHHCCCCHHHC GGKIHNFYTHDGAEALYGKMKHFKKGRLVLHICETPIKCPVAPLEFVYMADWYLQKMGVR CCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC DNVEIELVTPLTGAFTKPVANNILGALCEQKGIKVTTNWTVDSVEADRSVITSVTGDEIN CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCHHHEEECCCCCCC YDLLVTIPPNLGQEFLIESEVSDVTGYVDTDKELLRAKKFENMYIIGDATNVPASKAGSV EEEEEEECCCCCHHHEEECCHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCE AHFEVDVIAQNMMSDIEGTDNYYKFDGHTNCFIVTGFEKASLIDFSYAIEPLPGMFPLPG EEEEHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCC VGPFELLGESHINYWGKLMFKWVYYNLMLKGHELPFEPNMYLAGKDTSLLRNK CCHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCHHHHCCC >Mature Secondary Structure MKKLLILGAGAGGTMIATKMRKLLSEREWQITLIDRDPVHHYQPGWLLVPFGVDTPQGCV CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHCC RPKKDFISRGVNFVIDTINSLDPIARKVECKNSTHTYDWIIIATGARIAPDEVPGLLDDW CCCHHHHHCCCCEEEHHHHHHCHHHHHHCCCCCCCEEEEEEEECCCEECHHHCCCCHHHC GGKIHNFYTHDGAEALYGKMKHFKKGRLVLHICETPIKCPVAPLEFVYMADWYLQKMGVR CCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC DNVEIELVTPLTGAFTKPVANNILGALCEQKGIKVTTNWTVDSVEADRSVITSVTGDEIN CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCHHHEEECCCCCCC YDLLVTIPPNLGQEFLIESEVSDVTGYVDTDKELLRAKKFENMYIIGDATNVPASKAGSV EEEEEEECCCCCHHHEEECCHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCE AHFEVDVIAQNMMSDIEGTDNYYKFDGHTNCFIVTGFEKASLIDFSYAIEPLPGMFPLPG EEEEHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCC VGPFELLGESHINYWGKLMFKWVYYNLMLKGHELPFEPNMYLAGKDTSLLRNK CCHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA