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The map label for this gene is 220905104

Identifier: 220905104

GI number: 220905104

Start: 2221964

End: 2222986

Strand: Direct

Name: 220905104

Synonym: Ddes_1841

Alternate gene names: NA

Gene position: 2221964-2222986 (Clockwise)

Preceding gene: 220905103

Following gene: 220905105

Centisome position: 77.33

GC content: 59.82

Gene sequence:

>1023_bases
ATGCAGACACAACTCTGGCAGCCTCTTCAAGGGCACGATCAGGGCAGCGTGCTGTGCCGCCTCTGCGCACATGGCTGCCG
CCTTAAAAAAGGGGCCAAGGGCCTGTGCGGTGTGCGGGCCAATATCAATGGAGAACTTGTCTCGGTGGTGCGTGATGTGG
TCACCGCCGTCAATCTGGATCCGGTAGAAAAAAAACCGCTCTACCACTTTCTTCCGGGCAGCCGGACTTTTTCTGTCGGC
AGCGTGGGCTGCAACTTTTCCTGCAAGTTTTGCCAGAACAGCGACATTGCCCACATACCCGCCAACGGCGTAGTTCCCGG
CAGGCGCGCCACGCCCGAAGACCTGATACTCCTGGCCCAGGAAAACCGCGCCCGCAGCATGGCTTTTACCTACAACGAGC
CTACGGTTTTTTTTGAGCTGGTTTACGAAACCGCTTCCCTTGCCGTGGCCCGGGGCATGCGCAGCCTGCTGGTGACCAAC
GGCTATATGTCGACGGATTGCCTGACGGTTCTGAGCCGGAGCGTTCAGGCAGCCAATGTGGACCTCAAGGCTTTCAGCGA
CAGCTTCTATCGCCAGTACTGCGGCGCGCGCCTGCAGCCGGTGCTCGACAATCTCAAGACCATCAGGGCCATGGGCTGGT
GGCTCGAAGTGACAACCCTCGTCATTCCCGGCGTCAATGACAGCCCGGGCGAACTCAAGGCCGCCGCGTCCTTTATCCGG
CAGGAACTGGGGGCCGATACCCCCTGGCATATCTCAGCCTTTCACGGTGCGCACCTCATGGCCGACCATCCTTCCACCCC
GCTGGCAAAACTTGAAGAAGCCTGGGCCATAGGCCGTGATGAAGGCCTGCATTTTGTATATATAGGCAATGCGCAGAACG
CGTTGGGCGGCAATACGTTTTGTCCCCAGTGCGGCAACCTGGTTATAGAGCGCCGGGGCTACAACATACGGTCACTCATG
CAGGCAGACGCGCCCGGCGCGTGTCCTTCCTGTCACGCGGCCCTGACAGGAGTGTGGAGCTGA

Upstream 100 bases:

>100_bases
CAAAACGGCATACAGTCTGCGCCGGGACAAGGCGGCACGGCCCGTTCCATGCCATTCAGCAGCATATACCCACCCGGTTC
CGGCACGGAGGAACGCTGAC

Downstream 100 bases:

>100_bases
TGATTCTTGTTTATACGGGTGACGGCAAAGGCAAGACAAGCGCCTGCACTGGGCAGGCCGTACGCGCCATGGGCCAGGGC
ATGACCGTGGCTTTTGGTCA

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MQTQLWQPLQGHDQGSVLCRLCAHGCRLKKGAKGLCGVRANINGELVSVVRDVVTAVNLDPVEKKPLYHFLPGSRTFSVG
SVGCNFSCKFCQNSDIAHIPANGVVPGRRATPEDLILLAQENRARSMAFTYNEPTVFFELVYETASLAVARGMRSLLVTN
GYMSTDCLTVLSRSVQAANVDLKAFSDSFYRQYCGARLQPVLDNLKTIRAMGWWLEVTTLVIPGVNDSPGELKAAASFIR
QELGADTPWHISAFHGAHLMADHPSTPLAKLEEAWAIGRDEGLHFVYIGNAQNALGGNTFCPQCGNLVIERRGYNIRSLM
QADAPGACPSCHAALTGVWS

Sequences:

>Translated_340_residues
MQTQLWQPLQGHDQGSVLCRLCAHGCRLKKGAKGLCGVRANINGELVSVVRDVVTAVNLDPVEKKPLYHFLPGSRTFSVG
SVGCNFSCKFCQNSDIAHIPANGVVPGRRATPEDLILLAQENRARSMAFTYNEPTVFFELVYETASLAVARGMRSLLVTN
GYMSTDCLTVLSRSVQAANVDLKAFSDSFYRQYCGARLQPVLDNLKTIRAMGWWLEVTTLVIPGVNDSPGELKAAASFIR
QELGADTPWHISAFHGAHLMADHPSTPLAKLEEAWAIGRDEGLHFVYIGNAQNALGGNTFCPQCGNLVIERRGYNIRSLM
QADAPGACPSCHAALTGVWS
>Mature_340_residues
MQTQLWQPLQGHDQGSVLCRLCAHGCRLKKGAKGLCGVRANINGELVSVVRDVVTAVNLDPVEKKPLYHFLPGSRTFSVG
SVGCNFSCKFCQNSDIAHIPANGVVPGRRATPEDLILLAQENRARSMAFTYNEPTVFFELVYETASLAVARGMRSLLVTN
GYMSTDCLTVLSRSVQAANVDLKAFSDSFYRQYCGARLQPVLDNLKTIRAMGWWLEVTTLVIPGVNDSPGELKAAASFIR
QELGADTPWHISAFHGAHLMADHPSTPLAKLEEAWAIGRDEGLHFVYIGNAQNALGGNTFCPQCGNLVIERRGYNIRSLM
QADAPGACPSCHAALTGVWS

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36966; Mature: 36966

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTQLWQPLQGHDQGSVLCRLCAHGCRLKKGAKGLCGVRANINGELVSVVRDVVTAVNLD
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCC
PVEKKPLYHFLPGSRTFSVGSVGCNFSCKFCQNSDIAHIPANGVVPGRRATPEDLILLAQ
CCCCCCCEEECCCCCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEC
ENRARSMAFTYNEPTVFFELVYETASLAVARGMRSLLVTNGYMSTDCLTVLSRSVQAANV
CCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
DLKAFSDSFYRQYCGARLQPVLDNLKTIRAMGWWLEVTTLVIPGVNDSPGELKAAASFIR
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHH
QELGADTPWHISAFHGAHLMADHPSTPLAKLEEAWAIGRDEGLHFVYIGNAQNALGGNTF
HHHCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC
CPQCGNLVIERRGYNIRSLMQADAPGACPSCHAALTGVWS
CCCCCCEEEEECCCCHHHHHHCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MQTQLWQPLQGHDQGSVLCRLCAHGCRLKKGAKGLCGVRANINGELVSVVRDVVTAVNLD
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCC
PVEKKPLYHFLPGSRTFSVGSVGCNFSCKFCQNSDIAHIPANGVVPGRRATPEDLILLAQ
CCCCCCCEEECCCCCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEC
ENRARSMAFTYNEPTVFFELVYETASLAVARGMRSLLVTNGYMSTDCLTVLSRSVQAANV
CCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
DLKAFSDSFYRQYCGARLQPVLDNLKTIRAMGWWLEVTTLVIPGVNDSPGELKAAASFIR
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHH
QELGADTPWHISAFHGAHLMADHPSTPLAKLEEAWAIGRDEGLHFVYIGNAQNALGGNTF
HHHCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC
CPQCGNLVIERRGYNIRSLMQADAPGACPSCHAALTGVWS
CCCCCCEEEEECCCCHHHHHHCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]