| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is ygfJ [C]
Identifier: 220905079
GI number: 220905079
Start: 2188885
End: 2190156
Strand: Reverse
Name: ygfJ [C]
Synonym: Ddes_1816
Alternate gene names: 220905079
Gene position: 2190156-2188885 (Counterclockwise)
Preceding gene: 220905080
Following gene: 220905078
Centisome position: 76.22
GC content: 62.81
Gene sequence:
>1272_bases ATGAACGGCCACGCGCTTATTCTGGCCGCCGGACAGGCTTCACGCATGGGGCGCTGCAAGGCCCTTCTGCCCCTGGCGCT TGGCCCCGGCGGTGGCGACTGTACAGCCCTGGAAGGGCTGGTGCGCCTTTTTCACGTATCAGGTATTGCGCAGGTCACTG TTGTTACGGGCTTTCATGCGGAATACGTCGAGGCGGCGGCACGGGGCCTCGGCCTTGCGGTTGCTCGTAATCCCCGCCCT GAAGACGGCATGTTTTCTTCCGTATGTGCCGGACTTCGGGCGCTTTGCGGCCGTAACGGCGCTTCAGGCTCCTTTGCTAT GGAAGGCCCGGTTCTGGTGCAGCCCGTGGATGTGCCTCTTGTGCGGCCCATGACGCTGCAGGCCCTGCTTGAAACCCACG CAACCGATCAGGAAAGTGTGCTTGTTCCAGCCTTTGCTGGTGAAGAGGGACATCCGCCGCTGCTGCCGGGCCGCTGTTTG CGTCAGGTGCTGGGGCATGGGCATGCGGGCGGCAAAGGGGGATTGCGCGGCGCTCTGGCGGGCTTGCCCGTGCGGCTGGT TGCCGTGGCGGACAGTCTTGTGCTGCCTGATATGGACAGGCCGGAAGACTACGAAAGCCTGCGGCTTCTGGCGCCGCACA GAAATGCCCTGTGGCCGTGCGAAGCTGTGGAATTGCTGCGCCTGCACAAGGTGCCTGAAAAAGGCGTGCGCCACGGCAAG GCTGTGGGTGCTGTTGCCGCTGCCCTGACAAAAGCTCTTGCACAGGCGCGGCAGATGGGGCAGACGCCGGAAGCCTGCCG CAGCGGACAGGCGCTCCTCAACTCCGGCCTTGCTCTGGCCGGGGGGTTGCTGCATGATATCTGTAAAGGAGAAAAAGGCC ATGAATCGGCTGCCGGACGCCTGCTGCGCTGTCTGCAACTGCCTGTAATGGCACGTCTGGTGGAGGATCACCGTGATCTG GACCTGCCGGACGATCTGCCCATCACTGAACGGGAACTGGTTTTTCTGGCGGACAAATATTGTTATGGAGCAAGTTTTGT GCCTGTGCAGCGACGATTTGAGCAAAAGCTGGAAATCTTTGGCGCTGATCCGGCGGCGGCCACGGCCATCAGGGGCCGCC TTGGGCGCGCTCTGGCGCTGGAAGAAAGGCTGGCACGAGAGCTGGTGTGCGATCAGGCATATGGGAAGGCGCATTGCCGG TCCCTTCCGGCAGATGTCGCCCGCGCGGCTCTGGAGCGGCTGGCCTCAGAAAAAAATGTCGCGGCTGGGTAA
Upstream 100 bases:
>100_bases GAGTGGTGAGTCTGCAAAAAGGCGGACATAATCCGGCTTCCGGTCCGGTCCGCCAGCCGGATACGGCAGATGCGCCCCAT TGCCTTCTGGGAGACTGGGC
Downstream 100 bases:
>100_bases AAGGCCGTCAGGGCCTTGAGACGGAAATAAAAACAGGCAGGCTGTTTCGCACCAGGTGGACCAGCGCATTGCACGCGGTT TTTCATGGCGGCTGCGCGAG
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase HD Sub Domain Protein; Phosphoglycerate/Bisphosphoglycerate Mutase; HD Domain Protein
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MNGHALILAAGQASRMGRCKALLPLALGPGGGDCTALEGLVRLFHVSGIAQVTVVTGFHAEYVEAAARGLGLAVARNPRP EDGMFSSVCAGLRALCGRNGASGSFAMEGPVLVQPVDVPLVRPMTLQALLETHATDQESVLVPAFAGEEGHPPLLPGRCL RQVLGHGHAGGKGGLRGALAGLPVRLVAVADSLVLPDMDRPEDYESLRLLAPHRNALWPCEAVELLRLHKVPEKGVRHGK AVGAVAAALTKALAQARQMGQTPEACRSGQALLNSGLALAGGLLHDICKGEKGHESAAGRLLRCLQLPVMARLVEDHRDL DLPDDLPITERELVFLADKYCYGASFVPVQRRFEQKLEIFGADPAAATAIRGRLGRALALEERLARELVCDQAYGKAHCR SLPADVARAALERLASEKNVAAG
Sequences:
>Translated_423_residues MNGHALILAAGQASRMGRCKALLPLALGPGGGDCTALEGLVRLFHVSGIAQVTVVTGFHAEYVEAAARGLGLAVARNPRP EDGMFSSVCAGLRALCGRNGASGSFAMEGPVLVQPVDVPLVRPMTLQALLETHATDQESVLVPAFAGEEGHPPLLPGRCL RQVLGHGHAGGKGGLRGALAGLPVRLVAVADSLVLPDMDRPEDYESLRLLAPHRNALWPCEAVELLRLHKVPEKGVRHGK AVGAVAAALTKALAQARQMGQTPEACRSGQALLNSGLALAGGLLHDICKGEKGHESAAGRLLRCLQLPVMARLVEDHRDL DLPDDLPITERELVFLADKYCYGASFVPVQRRFEQKLEIFGADPAAATAIRGRLGRALALEERLARELVCDQAYGKAHCR SLPADVARAALERLASEKNVAAG >Mature_423_residues MNGHALILAAGQASRMGRCKALLPLALGPGGGDCTALEGLVRLFHVSGIAQVTVVTGFHAEYVEAAARGLGLAVARNPRP EDGMFSSVCAGLRALCGRNGASGSFAMEGPVLVQPVDVPLVRPMTLQALLETHATDQESVLVPAFAGEEGHPPLLPGRCL RQVLGHGHAGGKGGLRGALAGLPVRLVAVADSLVLPDMDRPEDYESLRLLAPHRNALWPCEAVELLRLHKVPEKGVRHGK AVGAVAAALTKALAQARQMGQTPEACRSGQALLNSGLALAGGLLHDICKGEKGHESAAGRLLRCLQLPVMARLVEDHRDL DLPDDLPITERELVFLADKYCYGASFVPVQRRFEQKLEIFGADPAAATAIRGRLGRALALEERLARELVCDQAYGKAHCR SLPADVARAALERLASEKNVAAG
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44591; Mature: 44591
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGHALILAAGQASRMGRCKALLPLALGPGGGDCTALEGLVRLFHVSGIAQVTVVTGFHA CCCCEEEEECCCCCCCCCHHHHEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHH EYVEAAARGLGLAVARNPRPEDGMFSSVCAGLRALCGRNGASGSFAMEGPVLVQPVDVPL HHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCC VRPMTLQALLETHATDQESVLVPAFAGEEGHPPLLPGRCLRQVLGHGHAGGKGGLRGALA CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH GLPVRLVAVADSLVLPDMDRPEDYESLRLLAPHRNALWPCEAVELLRLHKVPEKGVRHGK CCCCHHHHHHHHHHCCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHH AVGAVAAALTKALAQARQMGQTPEACRSGQALLNSGLALAGGLLHDICKGEKGHESAAGR HHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH LLRCLQLPVMARLVEDHRDLDLPDDLPITERELVFLADKYCYGASFVPVQRRFEQKLEIF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEHHHHCCCCCHHHHHHHHHHHHHC GADPAAATAIRGRLGRALALEERLARELVCDQAYGKAHCRSLPADVARAALERLASEKNV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHCCCC AAG CCC >Mature Secondary Structure MNGHALILAAGQASRMGRCKALLPLALGPGGGDCTALEGLVRLFHVSGIAQVTVVTGFHA CCCCEEEEECCCCCCCCCHHHHEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHH EYVEAAARGLGLAVARNPRPEDGMFSSVCAGLRALCGRNGASGSFAMEGPVLVQPVDVPL HHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCC VRPMTLQALLETHATDQESVLVPAFAGEEGHPPLLPGRCLRQVLGHGHAGGKGGLRGALA CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH GLPVRLVAVADSLVLPDMDRPEDYESLRLLAPHRNALWPCEAVELLRLHKVPEKGVRHGK CCCCHHHHHHHHHHCCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHH AVGAVAAALTKALAQARQMGQTPEACRSGQALLNSGLALAGGLLHDICKGEKGHESAAGR HHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH LLRCLQLPVMARLVEDHRDLDLPDDLPITERELVFLADKYCYGASFVPVQRRFEQKLEIF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEHHHHCCCCCHHHHHHHHHHHHHC GADPAAATAIRGRLGRALALEERLARELVCDQAYGKAHCRSLPADVARAALERLASEKNV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHCCCC AAG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA