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The map label for this gene is yraN [C]

Identifier: 220905055

GI number: 220905055

Start: 2165802

End: 2166284

Strand: Direct

Name: yraN [C]

Synonym: Ddes_1792

Alternate gene names: 220905055

Gene position: 2165802-2166284 (Clockwise)

Preceding gene: 220905054

Following gene: 220905056

Centisome position: 75.37

GC content: 65.42

Gene sequence:

>483_bases
ATGCCCTCCGGTTCCGGAAACACGGCGAAAGACGCAACAGCCTCCGAATCCGGCAAATCCGTCAGGCCCGCTACCGCTCC
TGCAGCCGCCCACCTGCGACTCGGCAGCGCGGGAGAAGACGCCGCAGCCGAACTGCTGACTGGCGCGGGCTGCACACTGC
TTGCCCGCAACTGGCGGCAGGCGCGGCTTGAGTTGGATATGGTCTGCCTTGACGGCGACACTATTGTTTTTGTTGAAGTA
AAAACCCGCAGCAGCGAGCGCTACGGCGGCCCGGCGTACGCCGTCGGCCTGTCCAAGCAGCGCGTCCTGTGCCGCGCCGC
CCGCGCCTGGCTGGCCGCGCACGAGGCATGGGACAAACCCTGCCGCTTTGACGTCATCTGCGTTCTGCGCAATGGCGACA
CCCTGCACCTGGAGCATTTTCGCCATGCCTTCGACTGCCCCCCGGCTCTGGATAGTAGCCACACCTCTTGGCAACCCTGG
TGA

Upstream 100 bases:

>100_bases
AAGACTGTACGGTGGAACAGGGCTGCCTGTTATGAATCTGCGCAAGTTGCTGCCCGCCTTTTTTGCCGGAAAGTCAGGTA
AAATTTCTCCGGAAGGCAAA

Downstream 100 bases:

>100_bases
CCTTTCTCCCAGGGCAAGCGCCGTACTTGCCGGAGCCGACCTCGTGCTGGCCGAAGACACGCGCCGCGCCGCCCGCCTGT
TCCGCGAATGTGGCATCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MPSGSGNTAKDATASESGKSVRPATAPAAAHLRLGSAGEDAAAELLTGAGCTLLARNWRQARLELDMVCLDGDTIVFVEV
KTRSSERYGGPAYAVGLSKQRVLCRAARAWLAAHEAWDKPCRFDVICVLRNGDTLHLEHFRHAFDCPPALDSSHTSWQPW

Sequences:

>Translated_160_residues
MPSGSGNTAKDATASESGKSVRPATAPAAAHLRLGSAGEDAAAELLTGAGCTLLARNWRQARLELDMVCLDGDTIVFVEV
KTRSSERYGGPAYAVGLSKQRVLCRAARAWLAAHEAWDKPCRFDVICVLRNGDTLHLEHFRHAFDCPPALDSSHTSWQPW
>Mature_159_residues
PSGSGNTAKDATASESGKSVRPATAPAAAHLRLGSAGEDAAAELLTGAGCTLLARNWRQARLELDMVCLDGDTIVFVEVK
TRSSERYGGPAYAVGLSKQRVLCRAARAWLAAHEAWDKPCRFDVICVLRNGDTLHLEHFRHAFDCPPALDSSHTSWQPW

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=113, Percent_Identity=38.9380530973451, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 17273; Mature: 17141

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSGSGNTAKDATASESGKSVRPATAPAAAHLRLGSAGEDAAAELLTGAGCTLLARNWRQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHH
ARLELDMVCLDGDTIVFVEVKTRSSERYGGPAYAVGLSKQRVLCRAARAWLAAHEAWDKP
HCEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCC
CRFDVICVLRNGDTLHLEHFRHAFDCPPALDSSHTSWQPW
CCEEEEEEEECCCEEEHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSGSGNTAKDATASESGKSVRPATAPAAAHLRLGSAGEDAAAELLTGAGCTLLARNWRQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHH
ARLELDMVCLDGDTIVFVEVKTRSSERYGGPAYAVGLSKQRVLCRAARAWLAAHEAWDKP
HCEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCC
CRFDVICVLRNGDTLHLEHFRHAFDCPPALDSSHTSWQPW
CCEEEEEEEECCCEEEHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA