Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220905043

Identifier: 220905043

GI number: 220905043

Start: 2149184

End: 2150191

Strand: Reverse

Name: 220905043

Synonym: Ddes_1780

Alternate gene names: NA

Gene position: 2150191-2149184 (Counterclockwise)

Preceding gene: 220905044

Following gene: 220905041

Centisome position: 74.83

GC content: 59.52

Gene sequence:

>1008_bases
ATGCATAGCCATTTGACTCGTCAGCAACTGGAAGCCCTTACCCTGCGTTGGGAACAGTGGGAAAGCGAGGCTGCCACCAG
GGCGCAAAAAATCGCCCGCGCCCGTCTGCACCTGCTTTTTCTGGTGTTCCGCTACGGGGGGCTGCGCCTTGGCGAAGCCC
TGAGCCTTGAGCCGTGCCGCGCCATTGATACTGTTACGGGCATGATGCGTGTATCCGGTGCCAATGCGCGTGAAATCCTG
CTGCCTTTGAGCGCCATGCGCCACATCCGGCGTATCCTCAGTCTGCCGCAGGCGGCGAAGCCGGGGTTTCTGCGTTTTGA
CCAGGGCTTTGTGCGTAAAAAGTTTTATGCCGTGGGCGAAACAATGGATTTGCCTGCCGCTATGGTGGGGCCGCGCGCCA
TCCGTTATTCCCGCGGGCTTGAACTGCTCGCCCTGCATGTACCCATGCCGCTGGTGCAGAAATTTCTGGGCCAGCAGGGG
GCCGCGCAACTGAGAGCGTTTTTGAAGTTTTCCGGCGGCGAGGCGTGCCGCCTTCTGGCCGGGCAAAAGGCCGGGCTGGA
AAGTGCGGGGCATAATGGCCCGGCTGCTGCGGCTGATGACGGAACAAACCTGTTTTTCGGCGTTGTCAGCGGCATCAGTT
CTGGAATGCGCAAAATTCAGGTTGAGCTGACCACGTTTTCCGATGTGCGGCTTGCCGCTCTGTGTTCTCCCGAAGAGGCC
GGCCTGCTTGAACTGCATGAAAATCAGGTGCTGAGCGCCCATGTGGACCCGGCGCGTATTGTGGTTTGTGCGGAAAAAAT
GTCCGCCAGCCTTGTCAACTGCCTGCACGGCGTGGTGGAAAGCCTGCATGCCGACATGGTGGAAACATTTGTCTGCCTTG
GGCTGCCCGACGGCACGACCCTGCGGGCCACTCTTGACACACGGGCCGTGGGCAAACTGCATCTTGTTGAAGGTAAAAAA
GTTTTTGCCTATTTTCCTGCCGGGGCGGTACGTCTGCTGGCCGACTGA

Upstream 100 bases:

>100_bases
TCGAGGTCAGCCACAAACTTATTGCGCGCGCCTCTACCGGCGCTCCGCGTCGATCTTGGGCCGGACCTTCCGGCTCAGGA
TCGTAACGGCCTGTCTGCCT

Downstream 100 bases:

>100_bases
ATTTTTCGTTCCTTTTTTTGCTCTCCTGCCTCAACTACGCCAAGCACAGCAACTACGCCGCCGGGCGTCCGCTCTCTTTC
ATGCCCGCAGCACTGCCGGC

Product: TOBE domain-containing protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; TOBE Domain-Containing Protein; Integrase Family Protein

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MHSHLTRQQLEALTLRWEQWESEAATRAQKIARARLHLLFLVFRYGGLRLGEALSLEPCRAIDTVTGMMRVSGANAREIL
LPLSAMRHIRRILSLPQAAKPGFLRFDQGFVRKKFYAVGETMDLPAAMVGPRAIRYSRGLELLALHVPMPLVQKFLGQQG
AAQLRAFLKFSGGEACRLLAGQKAGLESAGHNGPAAAADDGTNLFFGVVSGISSGMRKIQVELTTFSDVRLAALCSPEEA
GLLELHENQVLSAHVDPARIVVCAEKMSASLVNCLHGVVESLHADMVETFVCLGLPDGTTLRATLDTRAVGKLHLVEGKK
VFAYFPAGAVRLLAD

Sequences:

>Translated_335_residues
MHSHLTRQQLEALTLRWEQWESEAATRAQKIARARLHLLFLVFRYGGLRLGEALSLEPCRAIDTVTGMMRVSGANAREIL
LPLSAMRHIRRILSLPQAAKPGFLRFDQGFVRKKFYAVGETMDLPAAMVGPRAIRYSRGLELLALHVPMPLVQKFLGQQG
AAQLRAFLKFSGGEACRLLAGQKAGLESAGHNGPAAAADDGTNLFFGVVSGISSGMRKIQVELTTFSDVRLAALCSPEEA
GLLELHENQVLSAHVDPARIVVCAEKMSASLVNCLHGVVESLHADMVETFVCLGLPDGTTLRATLDTRAVGKLHLVEGKK
VFAYFPAGAVRLLAD
>Mature_335_residues
MHSHLTRQQLEALTLRWEQWESEAATRAQKIARARLHLLFLVFRYGGLRLGEALSLEPCRAIDTVTGMMRVSGANAREIL
LPLSAMRHIRRILSLPQAAKPGFLRFDQGFVRKKFYAVGETMDLPAAMVGPRAIRYSRGLELLALHVPMPLVQKFLGQQG
AAQLRAFLKFSGGEACRLLAGQKAGLESAGHNGPAAAADDGTNLFFGVVSGISSGMRKIQVELTTFSDVRLAALCSPEEA
GLLELHENQVLSAHVDPARIVVCAEKMSASLVNCLHGVVESLHADMVETFVCLGLPDGTTLRATLDTRAVGKLHLVEGKK
VFAYFPAGAVRLLAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36372; Mature: 36372

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSHLTRQQLEALTLRWEQWESEAATRAQKIARARLHLLFLVFRYGGLRLGEALSLEPCR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
AIDTVTGMMRVSGANAREILLPLSAMRHIRRILSLPQAAKPGFLRFDQGFVRKKFYAVGE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHCCC
TMDLPAAMVGPRAIRYSRGLELLALHVPMPLVQKFLGQQGAAQLRAFLKFSGGEACRLLA
CCCCCHHHHCCHHHHHHCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEC
GQKAGLESAGHNGPAAAADDGTNLFFGVVSGISSGMRKIQVELTTFSDVRLAALCSPEEA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEECCCCCC
GLLELHENQVLSAHVDPARIVVCAEKMSASLVNCLHGVVESLHADMVETFVCLGLPDGTT
CEEEECCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE
LRATLDTRAVGKLHLVEGKKVFAYFPAGAVRLLAD
EEEEECCCCCCEEEEECCCEEEEECCCCCEEEECC
>Mature Secondary Structure
MHSHLTRQQLEALTLRWEQWESEAATRAQKIARARLHLLFLVFRYGGLRLGEALSLEPCR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
AIDTVTGMMRVSGANAREILLPLSAMRHIRRILSLPQAAKPGFLRFDQGFVRKKFYAVGE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHCCC
TMDLPAAMVGPRAIRYSRGLELLALHVPMPLVQKFLGQQGAAQLRAFLKFSGGEACRLLA
CCCCCHHHHCCHHHHHHCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEC
GQKAGLESAGHNGPAAAADDGTNLFFGVVSGISSGMRKIQVELTTFSDVRLAALCSPEEA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEECCCCCC
GLLELHENQVLSAHVDPARIVVCAEKMSASLVNCLHGVVESLHADMVETFVCLGLPDGTT
CEEEECCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE
LRATLDTRAVGKLHLVEGKKVFAYFPAGAVRLLAD
EEEEECCCCCCEEEEECCCEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA