| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905043
Identifier: 220905043
GI number: 220905043
Start: 2149184
End: 2150191
Strand: Reverse
Name: 220905043
Synonym: Ddes_1780
Alternate gene names: NA
Gene position: 2150191-2149184 (Counterclockwise)
Preceding gene: 220905044
Following gene: 220905041
Centisome position: 74.83
GC content: 59.52
Gene sequence:
>1008_bases ATGCATAGCCATTTGACTCGTCAGCAACTGGAAGCCCTTACCCTGCGTTGGGAACAGTGGGAAAGCGAGGCTGCCACCAG GGCGCAAAAAATCGCCCGCGCCCGTCTGCACCTGCTTTTTCTGGTGTTCCGCTACGGGGGGCTGCGCCTTGGCGAAGCCC TGAGCCTTGAGCCGTGCCGCGCCATTGATACTGTTACGGGCATGATGCGTGTATCCGGTGCCAATGCGCGTGAAATCCTG CTGCCTTTGAGCGCCATGCGCCACATCCGGCGTATCCTCAGTCTGCCGCAGGCGGCGAAGCCGGGGTTTCTGCGTTTTGA CCAGGGCTTTGTGCGTAAAAAGTTTTATGCCGTGGGCGAAACAATGGATTTGCCTGCCGCTATGGTGGGGCCGCGCGCCA TCCGTTATTCCCGCGGGCTTGAACTGCTCGCCCTGCATGTACCCATGCCGCTGGTGCAGAAATTTCTGGGCCAGCAGGGG GCCGCGCAACTGAGAGCGTTTTTGAAGTTTTCCGGCGGCGAGGCGTGCCGCCTTCTGGCCGGGCAAAAGGCCGGGCTGGA AAGTGCGGGGCATAATGGCCCGGCTGCTGCGGCTGATGACGGAACAAACCTGTTTTTCGGCGTTGTCAGCGGCATCAGTT CTGGAATGCGCAAAATTCAGGTTGAGCTGACCACGTTTTCCGATGTGCGGCTTGCCGCTCTGTGTTCTCCCGAAGAGGCC GGCCTGCTTGAACTGCATGAAAATCAGGTGCTGAGCGCCCATGTGGACCCGGCGCGTATTGTGGTTTGTGCGGAAAAAAT GTCCGCCAGCCTTGTCAACTGCCTGCACGGCGTGGTGGAAAGCCTGCATGCCGACATGGTGGAAACATTTGTCTGCCTTG GGCTGCCCGACGGCACGACCCTGCGGGCCACTCTTGACACACGGGCCGTGGGCAAACTGCATCTTGTTGAAGGTAAAAAA GTTTTTGCCTATTTTCCTGCCGGGGCGGTACGTCTGCTGGCCGACTGA
Upstream 100 bases:
>100_bases TCGAGGTCAGCCACAAACTTATTGCGCGCGCCTCTACCGGCGCTCCGCGTCGATCTTGGGCCGGACCTTCCGGCTCAGGA TCGTAACGGCCTGTCTGCCT
Downstream 100 bases:
>100_bases ATTTTTCGTTCCTTTTTTTGCTCTCCTGCCTCAACTACGCCAAGCACAGCAACTACGCCGCCGGGCGTCCGCTCTCTTTC ATGCCCGCAGCACTGCCGGC
Product: TOBE domain-containing protein
Products: NA
Alternate protein names: Phage Integrase Family Protein; TOBE Domain-Containing Protein; Integrase Family Protein
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MHSHLTRQQLEALTLRWEQWESEAATRAQKIARARLHLLFLVFRYGGLRLGEALSLEPCRAIDTVTGMMRVSGANAREIL LPLSAMRHIRRILSLPQAAKPGFLRFDQGFVRKKFYAVGETMDLPAAMVGPRAIRYSRGLELLALHVPMPLVQKFLGQQG AAQLRAFLKFSGGEACRLLAGQKAGLESAGHNGPAAAADDGTNLFFGVVSGISSGMRKIQVELTTFSDVRLAALCSPEEA GLLELHENQVLSAHVDPARIVVCAEKMSASLVNCLHGVVESLHADMVETFVCLGLPDGTTLRATLDTRAVGKLHLVEGKK VFAYFPAGAVRLLAD
Sequences:
>Translated_335_residues MHSHLTRQQLEALTLRWEQWESEAATRAQKIARARLHLLFLVFRYGGLRLGEALSLEPCRAIDTVTGMMRVSGANAREIL LPLSAMRHIRRILSLPQAAKPGFLRFDQGFVRKKFYAVGETMDLPAAMVGPRAIRYSRGLELLALHVPMPLVQKFLGQQG AAQLRAFLKFSGGEACRLLAGQKAGLESAGHNGPAAAADDGTNLFFGVVSGISSGMRKIQVELTTFSDVRLAALCSPEEA GLLELHENQVLSAHVDPARIVVCAEKMSASLVNCLHGVVESLHADMVETFVCLGLPDGTTLRATLDTRAVGKLHLVEGKK VFAYFPAGAVRLLAD >Mature_335_residues MHSHLTRQQLEALTLRWEQWESEAATRAQKIARARLHLLFLVFRYGGLRLGEALSLEPCRAIDTVTGMMRVSGANAREIL LPLSAMRHIRRILSLPQAAKPGFLRFDQGFVRKKFYAVGETMDLPAAMVGPRAIRYSRGLELLALHVPMPLVQKFLGQQG AAQLRAFLKFSGGEACRLLAGQKAGLESAGHNGPAAAADDGTNLFFGVVSGISSGMRKIQVELTTFSDVRLAALCSPEEA GLLELHENQVLSAHVDPARIVVCAEKMSASLVNCLHGVVESLHADMVETFVCLGLPDGTTLRATLDTRAVGKLHLVEGKK VFAYFPAGAVRLLAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36372; Mature: 36372
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSHLTRQQLEALTLRWEQWESEAATRAQKIARARLHLLFLVFRYGGLRLGEALSLEPCR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH AIDTVTGMMRVSGANAREILLPLSAMRHIRRILSLPQAAKPGFLRFDQGFVRKKFYAVGE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHCCC TMDLPAAMVGPRAIRYSRGLELLALHVPMPLVQKFLGQQGAAQLRAFLKFSGGEACRLLA CCCCCHHHHCCHHHHHHCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEC GQKAGLESAGHNGPAAAADDGTNLFFGVVSGISSGMRKIQVELTTFSDVRLAALCSPEEA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEECCCCCC GLLELHENQVLSAHVDPARIVVCAEKMSASLVNCLHGVVESLHADMVETFVCLGLPDGTT CEEEECCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE LRATLDTRAVGKLHLVEGKKVFAYFPAGAVRLLAD EEEEECCCCCCEEEEECCCEEEEECCCCCEEEECC >Mature Secondary Structure MHSHLTRQQLEALTLRWEQWESEAATRAQKIARARLHLLFLVFRYGGLRLGEALSLEPCR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH AIDTVTGMMRVSGANAREILLPLSAMRHIRRILSLPQAAKPGFLRFDQGFVRKKFYAVGE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHCCC TMDLPAAMVGPRAIRYSRGLELLALHVPMPLVQKFLGQQGAAQLRAFLKFSGGEACRLLA CCCCCHHHHCCHHHHHHCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEC GQKAGLESAGHNGPAAAADDGTNLFFGVVSGISSGMRKIQVELTTFSDVRLAALCSPEEA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEECCCCCC GLLELHENQVLSAHVDPARIVVCAEKMSASLVNCLHGVVESLHADMVETFVCLGLPDGTT CEEEECCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE LRATLDTRAVGKLHLVEGKKVFAYFPAGAVRLLAD EEEEECCCCCCEEEEECCCEEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA