| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is ilvA [H]
Identifier: 220905026
GI number: 220905026
Start: 2131924
End: 2133462
Strand: Reverse
Name: ilvA [H]
Synonym: Ddes_1763
Alternate gene names: 220905026
Gene position: 2133462-2131924 (Counterclockwise)
Preceding gene: 220905036
Following gene: 220905020
Centisome position: 74.25
GC content: 60.62
Gene sequence:
>1539_bases ATGCACAAGCACAGCGAATACCTGAACCGCATTTTGTTGAGCCGCGTTTATGACGTGGCTGTGGAGACGCCCCTCGAAGA AGCCAAGACCCTTTCGCGTCGCCTCGGCAACCGAATTCTGCTCAAGCGCGAGGATTATCAGCCTGTTTTTTCCTTCAAGC TGCGTGGCGCGTACAACAAGATGGCCCGCCTTTCGCCGGAAGACCTGCGGCGCGGCGTTATTGCCGCCTCGGCGGGCAAC CATGCCCAGGGCGTAGCCCTGGCGGCGCGCAAGCTCGGCTGCGAAGCTACCATCGTCATGCCTGTGACGACCCCCGCCAT CAAGGTGGAGGCTGTGCGCCGTCTGGGCGGGCAGGTGGTGCTTTCAGGCGAATCGTTCAGCGATGCCTGGCAGCATACGC TTAAACTTATTCAGGAAAGCGGCTGTATCTATGTACCGCCTTTTGACGATCCCGATGTCATTGCCGGGCAGGGAACCATC GCCATGGAAATTCTGCGGCAACACCCCGGCGATATACACGCTGTTTTTGTTCCCATCGGCGGCGGGGGCATGGCGGCGGG CGTTGCGGCCTATATCAAGGCCTTGCGGCCAGAAATCAGGGTCATCGGCGTGGAGCCTGTGGATTCCGACGCCATGCGCC GTTCGGTCATGGCCGGACACCGGGTGGAAATGCACGACGTGGGGCTTTTTGCCGATGGCGTTGCCGTGAAGCTGGTGGGC GAACACACTTTTGCCCTGTGCCGGGACCTCCTGGACGACATCATTGTGGTGGAGACAGACGCCATCTGCGGGGCCATAAA GGACATCTTTGAAGATACTCGCCTGGTTGCCGAACCAGCGGGAGCTTTGGCCCTGGCCGGGTTGCGCGCCTACGCTGCGG CCAGCGGCCAGCGGGACGCCACCCTGGTGGCAGTGGTCAGCGGGGCCAACATGAACTTCGACCGTCTGAGCCATGTGGTG GACCGGTCTGAAATCGGCGCACACCGCGAAGCCCTGCTGGCAGTGACCATTCCGGAGGCCGTGGGCAGCTTTCGCGCCCT GTGCGCTTCTTTTGGCAGCCGCAATATTACGGAGCTTTGTACCCGTTTTTCCGACCCGGTGAAGGCGCGTGTGCTGGTGG GCATAAAGATCAGCGGGCGGGAAGATGTGGCCGAAGTGCTGGCAGAACTGCACAGCAAGGGCTTTGGAGCCGTTGATCTG ACAGATAACGAGTTTGCCAAGGTTCACTTGCGGCATCTGGTGGGCGGCAACGCGCCGCAGGTGCTGCATGAGCGGTTGCT GCGCTTTACCTTTCCCGAACGGCCCGGCGCTTTGCTGGACTTTATGGACGCCATGCGCGTGGATTTCAGTATCAGCCTGT TCCAGTACCGTTATCACGGCGCAGACTTTGGCCGCGTACTGGTGGGCTTTGAGGTTCCGGAAGAAAAGCGCGGGGTTTTC GAGGAGTTTTTGCAGCGGGTTGAAGGCATGGGCTACCCGCATGTGGAAGAAACGGGCAATCCCGCCTACCAGATGTTTCT GGGATGGCACGACGACTAG
Upstream 100 bases:
>100_bases GAGCGGACGCCGGGTATATAAGAATCTGCGCTGACGAACAAGCCTTTTTCTACACGGCTGCAGGACGGCCGTGTCATTTT TGCAGCCGAAGGACACATGC
Downstream 100 bases:
>100_bases CACATTTTACCTTTGAAAAAAGTTACATGCGCTCATGCTGCACGAGAGTGCAGCGCGTTGTAACACGTTGTGCATTCTGT AGAAGATTATATTTTTAGCA
Product: threonine dehydratase, biosynthetic
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MHKHSEYLNRILLSRVYDVAVETPLEEAKTLSRRLGNRILLKREDYQPVFSFKLRGAYNKMARLSPEDLRRGVIAASAGN HAQGVALAARKLGCEATIVMPVTTPAIKVEAVRRLGGQVVLSGESFSDAWQHTLKLIQESGCIYVPPFDDPDVIAGQGTI AMEILRQHPGDIHAVFVPIGGGGMAAGVAAYIKALRPEIRVIGVEPVDSDAMRRSVMAGHRVEMHDVGLFADGVAVKLVG EHTFALCRDLLDDIIVVETDAICGAIKDIFEDTRLVAEPAGALALAGLRAYAAASGQRDATLVAVVSGANMNFDRLSHVV DRSEIGAHREALLAVTIPEAVGSFRALCASFGSRNITELCTRFSDPVKARVLVGIKISGREDVAEVLAELHSKGFGAVDL TDNEFAKVHLRHLVGGNAPQVLHERLLRFTFPERPGALLDFMDAMRVDFSISLFQYRYHGADFGRVLVGFEVPEEKRGVF EEFLQRVEGMGYPHVEETGNPAYQMFLGWHDD
Sequences:
>Translated_512_residues MHKHSEYLNRILLSRVYDVAVETPLEEAKTLSRRLGNRILLKREDYQPVFSFKLRGAYNKMARLSPEDLRRGVIAASAGN HAQGVALAARKLGCEATIVMPVTTPAIKVEAVRRLGGQVVLSGESFSDAWQHTLKLIQESGCIYVPPFDDPDVIAGQGTI AMEILRQHPGDIHAVFVPIGGGGMAAGVAAYIKALRPEIRVIGVEPVDSDAMRRSVMAGHRVEMHDVGLFADGVAVKLVG EHTFALCRDLLDDIIVVETDAICGAIKDIFEDTRLVAEPAGALALAGLRAYAAASGQRDATLVAVVSGANMNFDRLSHVV DRSEIGAHREALLAVTIPEAVGSFRALCASFGSRNITELCTRFSDPVKARVLVGIKISGREDVAEVLAELHSKGFGAVDL TDNEFAKVHLRHLVGGNAPQVLHERLLRFTFPERPGALLDFMDAMRVDFSISLFQYRYHGADFGRVLVGFEVPEEKRGVF EEFLQRVEGMGYPHVEETGNPAYQMFLGWHDD >Mature_512_residues MHKHSEYLNRILLSRVYDVAVETPLEEAKTLSRRLGNRILLKREDYQPVFSFKLRGAYNKMARLSPEDLRRGVIAASAGN HAQGVALAARKLGCEATIVMPVTTPAIKVEAVRRLGGQVVLSGESFSDAWQHTLKLIQESGCIYVPPFDDPDVIAGQGTI AMEILRQHPGDIHAVFVPIGGGGMAAGVAAYIKALRPEIRVIGVEPVDSDAMRRSVMAGHRVEMHDVGLFADGVAVKLVG EHTFALCRDLLDDIIVVETDAICGAIKDIFEDTRLVAEPAGALALAGLRAYAAASGQRDATLVAVVSGANMNFDRLSHVV DRSEIGAHREALLAVTIPEAVGSFRALCASFGSRNITELCTRFSDPVKARVLVGIKISGREDVAEVLAELHSKGFGAVDL TDNEFAKVHLRHLVGGNAPQVLHERLLRFTFPERPGALLDFMDAMRVDFSISLFQYRYHGADFGRVLVGFEVPEEKRGVF EEFLQRVEGMGYPHVEETGNPAYQMFLGWHDD
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=315, Percent_Identity=33.6507936507937, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI33469958, Length=312, Percent_Identity=27.8846153846154, Blast_Score=102, Evalue=7e-22, Organism=Homo sapiens, GI19923959, Length=310, Percent_Identity=27.741935483871, Blast_Score=87, Evalue=3e-17, Organism=Escherichia coli, GI1790207, Length=504, Percent_Identity=51.7857142857143, Blast_Score=478, Evalue=1e-136, Organism=Escherichia coli, GI1789505, Length=308, Percent_Identity=38.961038961039, Blast_Score=186, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71991565, Length=300, Percent_Identity=33.6666666666667, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI17537387, Length=375, Percent_Identity=33.3333333333333, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17508781, Length=294, Percent_Identity=31.6326530612245, Blast_Score=134, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6320930, Length=519, Percent_Identity=46.4354527938343, Blast_Score=450, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6322631, Length=314, Percent_Identity=36.624203821656, Blast_Score=182, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6319788, Length=292, Percent_Identity=27.7397260273973, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI21355833, Length=327, Percent_Identity=32.1100917431193, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI24645328, Length=250, Percent_Identity=29.6, Blast_Score=89, Evalue=9e-18,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 55941; Mature: 55941
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKHSEYLNRILLSRVYDVAVETPLEEAKTLSRRLGNRILLKREDYQPVFSFKLRGAYNK CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCHHHH MARLSPEDLRRGVIAASAGNHAQGVALAARKLGCEATIVMPVTTPAIKVEAVRRLGGQVV HHCCCHHHHHCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEE LSGESFSDAWQHTLKLIQESGCIYVPPFDDPDVIAGQGTIAMEILRQHPGDIHAVFVPIG ECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCHHHHHHHHHCCCCEEEEEEEEC GGGMAAGVAAYIKALRPEIRVIGVEPVDSDAMRRSVMAGHRVEMHDVGLFADGVAVKLVG CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCEEECCEEEEEEC EHTFALCRDLLDDIIVVETDAICGAIKDIFEDTRLVAEPAGALALAGLRAYAAASGQRDA HHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC TLVAVVSGANMNFDRLSHVVDRSEIGAHREALLAVTIPEAVGSFRALCASFGSRNITELC EEEEEEECCCCCHHHHHHHHHHHHCCCCHHEEEEEECHHHHHHHHHHHHHHCCCCHHHHH TRFSDPVKARVLVGIKISGREDVAEVLAELHSKGFGAVDLTDNEFAKVHLRHLVGGNAPQ HHCCCCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCHH VLHERLLRFTFPERPGALLDFMDAMRVDFSISLFQYRYHGADFGRVLVGFEVPEEKRGVF HHHHHHHHHCCCCCCCHHHHHHHHHHHCEEEEEEEEEECCCCCCEEEEEEECCHHHHHHH EEFLQRVEGMGYPHVEETGNPAYQMFLGWHDD HHHHHHHHCCCCCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MHKHSEYLNRILLSRVYDVAVETPLEEAKTLSRRLGNRILLKREDYQPVFSFKLRGAYNK CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCHHHH MARLSPEDLRRGVIAASAGNHAQGVALAARKLGCEATIVMPVTTPAIKVEAVRRLGGQVV HHCCCHHHHHCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEE LSGESFSDAWQHTLKLIQESGCIYVPPFDDPDVIAGQGTIAMEILRQHPGDIHAVFVPIG ECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCHHHHHHHHHCCCCEEEEEEEEC GGGMAAGVAAYIKALRPEIRVIGVEPVDSDAMRRSVMAGHRVEMHDVGLFADGVAVKLVG CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCEEECCEEEEEEC EHTFALCRDLLDDIIVVETDAICGAIKDIFEDTRLVAEPAGALALAGLRAYAAASGQRDA HHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC TLVAVVSGANMNFDRLSHVVDRSEIGAHREALLAVTIPEAVGSFRALCASFGSRNITELC EEEEEEECCCCCHHHHHHHHHHHHCCCCHHEEEEEECHHHHHHHHHHHHHHCCCCHHHHH TRFSDPVKARVLVGIKISGREDVAEVLAELHSKGFGAVDLTDNEFAKVHLRHLVGGNAPQ HHCCCCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCHH VLHERLLRFTFPERPGALLDFMDAMRVDFSISLFQYRYHGADFGRVLVGFEVPEEKRGVF HHHHHHHHHCCCCCCCHHHHHHHHHHHCEEEEEEEEEECCCCCCEEEEEEECCHHHHHHH EEFLQRVEGMGYPHVEETGNPAYQMFLGWHDD HHHHHHHHCCCCCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA