Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220904956

Identifier: 220904956

GI number: 220904956

Start: 2043378

End: 2043980

Strand: Reverse

Name: 220904956

Synonym: Ddes_1692

Alternate gene names: NA

Gene position: 2043980-2043378 (Counterclockwise)

Preceding gene: 220904957

Following gene: 220904938

Centisome position: 71.13

GC content: 66.5

Gene sequence:

>603_bases
ATGATGCAAGACCCTCTTCTATATGTATTTGATCTGGCGGCCAGCTTTATACTGGCCGCCGCCGCATCCTGCCGGGCGCG
CAACGGCGGAGCACACTTCAGTGGCGCGGCGGTTCTGGCCTGTCTGGCTGGACTGGCCGCGCCGCTTTTGCGTGATGCCC
TGCTGGGGCATCCTGTCCTGGCGCTGAACAGGGGGGATTATCTGGCTGCGGCAGTGGCCGGCGCGGTGGCCGGAACTCTG
GCTGCGCGTCTGGGGCATGCGTGGCGGGCTTTTTACTGGCTGGACAGTATGGGCCTGGGGCTGGCGGCCGGTGTAGGGGG
TGTGCGCGGCGCTGTTTTCGGCCTGGGTGTCGTGGGCTGCCTTGTGCTCGGGGTATTGGCGGCACTGGCCGGGGGGCTTG
TGCGGGATGTCGCCCTGGGGGACACCGCCCGGCTGGTAGAGGAAGACAGCTACGCCACTGCAGCGGCTCTGGGCGTTATG
CTTGCCCTTGTGGCTCTGCTTTACGGCGGCATGCCCCTCTGGATGTGTGCGCTCGCATGTTGCGGGCTGGTACTCGTGCT
GCGCGCCTTGCGCCTGCGTAAGGGCCTTCAGGGCGGCATTTGA

Upstream 100 bases:

>100_bases
CATATCCCGGACAGATCCGCGTAACGGTCATCCGTGAGCGGCGTGCCGTAGGCCTTGCCAAGTAGGCGGGGCGGCGCGGG
GCCGGGCCGGATCTACGGCT

Downstream 100 bases:

>100_bases
AGCCATTTTTTTCAGAATTGTTGAAAAAAATGCAAATAAGGCTTGACTGTTTTGATTTGTTTCACTATCTTCTCTTTTCG
CGACACGGGAACGGATTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MMQDPLLYVFDLAASFILAAAASCRARNGGAHFSGAAVLACLAGLAAPLLRDALLGHPVLALNRGDYLAAAVAGAVAGTL
AARLGHAWRAFYWLDSMGLGLAAGVGGVRGAVFGLGVVGCLVLGVLAALAGGLVRDVALGDTARLVEEDSYATAAALGVM
LALVALLYGGMPLWMCALACCGLVLVLRALRLRKGLQGGI

Sequences:

>Translated_200_residues
MMQDPLLYVFDLAASFILAAAASCRARNGGAHFSGAAVLACLAGLAAPLLRDALLGHPVLALNRGDYLAAAVAGAVAGTL
AARLGHAWRAFYWLDSMGLGLAAGVGGVRGAVFGLGVVGCLVLGVLAALAGGLVRDVALGDTARLVEEDSYATAAALGVM
LALVALLYGGMPLWMCALACCGLVLVLRALRLRKGLQGGI
>Mature_200_residues
MMQDPLLYVFDLAASFILAAAASCRARNGGAHFSGAAVLACLAGLAAPLLRDALLGHPVLALNRGDYLAAAVAGAVAGTL
AARLGHAWRAFYWLDSMGLGLAAGVGGVRGAVFGLGVVGCLVLGVLAALAGGLVRDVALGDTARLVEEDSYATAAALGVM
LALVALLYGGMPLWMCALACCGLVLVLRALRLRKGLQGGI

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20086; Mature: 20086

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQDPLLYVFDLAASFILAAAASCRARNGGAHFSGAAVLACLAGLAAPLLRDALLGHPVL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ALNRGDYLAAAVAGAVAGTLAARLGHAWRAFYWLDSMGLGLAAGVGGVRGAVFGLGVVGC
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHH
LVLGVLAALAGGLVRDVALGDTARLVEEDSYATAAALGVMLALVALLYGGMPLWMCALAC
HHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
CGLVLVLRALRLRKGLQGGI
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMQDPLLYVFDLAASFILAAAASCRARNGGAHFSGAAVLACLAGLAAPLLRDALLGHPVL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ALNRGDYLAAAVAGAVAGTLAARLGHAWRAFYWLDSMGLGLAAGVGGVRGAVFGLGVVGC
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHH
LVLGVLAALAGGLVRDVALGDTARLVEEDSYATAAALGVMLALVALLYGGMPLWMCALAC
HHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
CGLVLVLRALRLRKGLQGGI
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA