| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is aegA [H]
Identifier: 220904811
GI number: 220904811
Start: 1845338
End: 1847194
Strand: Direct
Name: aegA [H]
Synonym: Ddes_1543
Alternate gene names: 220904811
Gene position: 1845338-1847194 (Clockwise)
Preceding gene: 220904810
Following gene: 220904812
Centisome position: 64.22
GC content: 61.71
Gene sequence:
>1857_bases ATGCCTGCAATGGATACGTGGAGAGGACAAAAAAACAGCGAAGGCCTGCGGGCTTTTATGGGCTGGGGCGGCCTTGTCGT CAGCGATGAGACTGTCGATGTGCTCGACATGCTGCGCGCCTATTATGAGGGCGCGGCAGCCGAGTCCTGTGGGCAATGCT TTCCTTGCCGCAGCGGCCTGAAGCGCATTGCCGAGCGCCTTGATTCGCTTTGCCGCGGCAAAGCCCGGCCAGACGACCGC GAATACCTGCAGGAACTGGCAGCCCTGGTATACGACAGCGCCCGCTGCGACATCGGACAGACCTCGCCGCAGCCTCTGCT GGATGTACTGGCCCATGCCCCGCATCTGCTGGAAGCCAGAACAACGGTACGCGGCACCTATACCAGCCTTGTCACGGCGC CCTGCATCAATGCCTGCCCCGGGCATGTGAAAGTGCCGGACTATATTGAAGAAATCCGCTTTCGCCGCTTTCGCAAGGGG CTTGACCAGGTTATGCGCAACTGCCCCATGCCCGGCACCATCGGCCGGGTGTGCGAACGCCCCTGCGAAACCGCCTGCAA ACGCGGTCTCAAGGGCGCGCCGGTGGCCATACGCAATCTCAAGCGCTTTCTGCATGACCACAACGCAAAACGTAATCCGC TGCCCGAGCCGCAATGCCCGCCGGAAAATGCCAGAAAGGTCGCCATCATCGGCGGCGGCCCAGCCGGTTTGTCCTGCGCT TACTACCTTGCGCAGCTTGGCCTTGCACCCACCATTTTTGACCGGCATGAAGTTTGCGGCGGCATGGCGAAGTTCGGCAT CCCCGATTTTCGCCTGCCGCCCTCCGTACTGGCGCGCGAAGTCAGCGTGGCCGTCTCCGGCGGCGGAGAAATCCGCAACG GCATTGAGATCGGCCGGGACATCACCCTGGACGAACTGCACGATGAAGGCTTCGAGGCCGTCTTTATCGCCACGGGCGCT CCTCACGCACCGGGCATGCGCTGCGAAGGCGAAGAAAACTGCCCCCTGGGTTACCTCAGCGGTATTCATTACCTGCATGA AGCCACGCTGGGCAGGCGGCCCGTAAGCGGTACCCGCCTCGTGGTTGTGGGCGGCGGCAACGTGGCAATGGACTGCGCGC GCACAGCCCTGCGGCACGGCTTCAAGGAAGTGTACGTGGTCTACCGCCGCACCGAAGAAGAAATGCCCGCCGATCCGGTA GAAGTGGCAGAAGCCAGAGAAGAAGGCGCACTCTTTACCTTCCTGGCTGCGCCCATCCGCATCGAAAGCAGGGACGGACG CGTCAGCGGCCTTGTCTGCCAGAAAATGGAACTGGGCGCTGCAGATGCCTCCGGCAGACGCCGCCCCGTGCCGGTGAAAG GGGCTGTTTTTGAAATGCCGTGCGATGCGATTGTTTACGCCATCGGGCAAAAGGTTGCCCTTGAGGTTGTTCTCAAAGGC AAAGACGGCGCCCTGAACAAATACAATACGCTGGATGCCCACGAAATTACCGGCGAGGTCAGTGCCCTGCCCCGTATTTT TGGCGGTGGAGACTGCGTAACCGGGCCAAGCTCGCTTATTGCCGCTCTGGCGGCGGGCAAGCGTGCCGCTGCCCACATAG CCGCCCACCTTAACGGCACGGCGCAGGGGCCTTCGCCCAAAGAAAAGCTGGAACACATGCTCATGCAGATGAACATGCTG GATACGAAAGAAACTCCCCTGGAAGATCCCACACCGCTCATGCCCATTCATGCCATCCCGGTGCAGGAGCGGCTGCAAGG TTTTACAGAGGTGGAAACAGATCCGCTGGAATGGGAGGCAGTGCGCGAATCGTCCCGCTGCCTGCGCTGCCTGCGGCTCG TTATGGCGGCCACCTGA
Upstream 100 bases:
>100_bases GGCACACATTTTGGGGGAAACCACCAGCCTTTGCATATGCCTGCCAATACGCTACCATACGGCAGGCATAGAATGAGCGG AAAAACGCGGGAGGCATGCC
Downstream 100 bases:
>100_bases TCGGCCCTGGTTGCATATCAGGAGCCTGACCGGCAGTATGCGCGGCCATCATTGCCCGCACATGTCATGACCGGGCATGA TCTTGTTGCCGTAGCTGTTG
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 617
Protein sequence:
>618_residues MPAMDTWRGQKNSEGLRAFMGWGGLVVSDETVDVLDMLRAYYEGAAAESCGQCFPCRSGLKRIAERLDSLCRGKARPDDR EYLQELAALVYDSARCDIGQTSPQPLLDVLAHAPHLLEARTTVRGTYTSLVTAPCINACPGHVKVPDYIEEIRFRRFRKG LDQVMRNCPMPGTIGRVCERPCETACKRGLKGAPVAIRNLKRFLHDHNAKRNPLPEPQCPPENARKVAIIGGGPAGLSCA YYLAQLGLAPTIFDRHEVCGGMAKFGIPDFRLPPSVLAREVSVAVSGGGEIRNGIEIGRDITLDELHDEGFEAVFIATGA PHAPGMRCEGEENCPLGYLSGIHYLHEATLGRRPVSGTRLVVVGGGNVAMDCARTALRHGFKEVYVVYRRTEEEMPADPV EVAEAREEGALFTFLAAPIRIESRDGRVSGLVCQKMELGAADASGRRRPVPVKGAVFEMPCDAIVYAIGQKVALEVVLKG KDGALNKYNTLDAHEITGEVSALPRIFGGGDCVTGPSSLIAALAAGKRAAAHIAAHLNGTAQGPSPKEKLEHMLMQMNML DTKETPLEDPTPLMPIHAIPVQERLQGFTEVETDPLEWEAVRESSRCLRCLRLVMAAT
Sequences:
>Translated_618_residues MPAMDTWRGQKNSEGLRAFMGWGGLVVSDETVDVLDMLRAYYEGAAAESCGQCFPCRSGLKRIAERLDSLCRGKARPDDR EYLQELAALVYDSARCDIGQTSPQPLLDVLAHAPHLLEARTTVRGTYTSLVTAPCINACPGHVKVPDYIEEIRFRRFRKG LDQVMRNCPMPGTIGRVCERPCETACKRGLKGAPVAIRNLKRFLHDHNAKRNPLPEPQCPPENARKVAIIGGGPAGLSCA YYLAQLGLAPTIFDRHEVCGGMAKFGIPDFRLPPSVLAREVSVAVSGGGEIRNGIEIGRDITLDELHDEGFEAVFIATGA PHAPGMRCEGEENCPLGYLSGIHYLHEATLGRRPVSGTRLVVVGGGNVAMDCARTALRHGFKEVYVVYRRTEEEMPADPV EVAEAREEGALFTFLAAPIRIESRDGRVSGLVCQKMELGAADASGRRRPVPVKGAVFEMPCDAIVYAIGQKVALEVVLKG KDGALNKYNTLDAHEITGEVSALPRIFGGGDCVTGPSSLIAALAAGKRAAAHIAAHLNGTAQGPSPKEKLEHMLMQMNML DTKETPLEDPTPLMPIHAIPVQERLQGFTEVETDPLEWEAVRESSRCLRCLRLVMAAT >Mature_617_residues PAMDTWRGQKNSEGLRAFMGWGGLVVSDETVDVLDMLRAYYEGAAAESCGQCFPCRSGLKRIAERLDSLCRGKARPDDRE YLQELAALVYDSARCDIGQTSPQPLLDVLAHAPHLLEARTTVRGTYTSLVTAPCINACPGHVKVPDYIEEIRFRRFRKGL DQVMRNCPMPGTIGRVCERPCETACKRGLKGAPVAIRNLKRFLHDHNAKRNPLPEPQCPPENARKVAIIGGGPAGLSCAY YLAQLGLAPTIFDRHEVCGGMAKFGIPDFRLPPSVLAREVSVAVSGGGEIRNGIEIGRDITLDELHDEGFEAVFIATGAP HAPGMRCEGEENCPLGYLSGIHYLHEATLGRRPVSGTRLVVVGGGNVAMDCARTALRHGFKEVYVVYRRTEEEMPADPVE VAEAREEGALFTFLAAPIRIESRDGRVSGLVCQKMELGAADASGRRRPVPVKGAVFEMPCDAIVYAIGQKVALEVVLKGK DGALNKYNTLDAHEITGEVSALPRIFGGGDCVTGPSSLIAALAAGKRAAAHIAAHLNGTAQGPSPKEKLEHMLMQMNMLD TKETPLEDPTPLMPIHAIPVQERLQGFTEVETDPLEWEAVRESSRCLRCLRLVMAAT
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=459, Percent_Identity=26.1437908496732, Blast_Score=139, Evalue=1e-32, Organism=Escherichia coli, GI1788811, Length=417, Percent_Identity=35.0119904076739, Blast_Score=230, Evalue=2e-61, Organism=Escherichia coli, GI87082180, Length=418, Percent_Identity=35.6459330143541, Blast_Score=223, Evalue=4e-59, Organism=Escherichia coli, GI1789606, Length=430, Percent_Identity=33.953488372093, Blast_Score=222, Evalue=7e-59, Organism=Escherichia coli, GI1789243, Length=413, Percent_Identity=32.9297820823245, Blast_Score=183, Evalue=2e-47, Organism=Escherichia coli, GI1788468, Length=414, Percent_Identity=29.2270531400966, Blast_Score=152, Evalue=8e-38, Organism=Caenorhabditis elegans, GI71984108, Length=431, Percent_Identity=28.0742459396752, Blast_Score=141, Evalue=9e-34, Organism=Caenorhabditis elegans, GI17570289, Length=443, Percent_Identity=24.8306997742664, Blast_Score=127, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6320030, Length=450, Percent_Identity=27.5555555555556, Blast_Score=143, Evalue=6e-35, Organism=Drosophila melanogaster, GI28574881, Length=449, Percent_Identity=25.8351893095768, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24665539, Length=449, Percent_Identity=25.8351893095768, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24665547, Length=450, Percent_Identity=25.7777777777778, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI24665543, Length=450, Percent_Identity=25.7777777777778, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI24640763, Length=428, Percent_Identity=25.9345794392523, Blast_Score=136, Evalue=5e-32, Organism=Drosophila melanogaster, GI18858217, Length=428, Percent_Identity=25.9345794392523, Blast_Score=136, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 67044; Mature: 66913
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00645 COMPLEX1_51K_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAMDTWRGQKNSEGLRAFMGWGGLVVSDETVDVLDMLRAYYEGAAAESCGQCFPCRSGL CCCCCCCCCCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCHHHHCCCCHHHHHH KRIAERLDSLCRGKARPDDREYLQELAALVYDSARCDIGQTSPQPLLDVLAHAPHLLEAR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHH TTVRGTYTSLVTAPCINACPGHVKVPDYIEEIRFRRFRKGLDQVMRNCPMPGTIGRVCER HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH PCETACKRGLKGAPVAIRNLKRFLHDHNAKRNPLPEPQCPPENARKVAIIGGGPAGLSCA HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHH YYLAQLGLAPTIFDRHEVCGGMAKFGIPDFRLPPSVLAREVSVAVSGGGEIRNGIEIGRD HHHHHHCCCCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHEEECCCCHHHHHHHHCCC ITLDELHDEGFEAVFIATGAPHAPGMRCEGEENCPLGYLSGIHYLHEATLGRRPVSGTRL CCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE VVVGGGNVAMDCARTALRHGFKEVYVVYRRTEEEMPADPVEVAEAREEGALFTFLAAPIR EEECCCCHHHHHHHHHHHHCHHHHHHHHHHCHHCCCCCHHHHHHHHHCCCEEEEEECCEE IESRDGRVSGLVCQKMELGAADASGRRRPVPVKGAVFEMPCDAIVYAIGQKVALEVVLKG EECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCEEEEEEEEC KDGALNKYNTLDAHEITGEVSALPRIFGGGDCVTGPSSLIAALAAGKRAAAHIAAHLNGT CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCC AQGPSPKEKLEHMLMQMNMLDTKETPLEDPTPLMPIHAIPVQERLQGFTEVETDPLEWEA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHCCHHHCCCCCCHHHH VRESSRCLRCLRLVMAAT HHHHHHHHHHHHHHHHCC >Mature Secondary Structure PAMDTWRGQKNSEGLRAFMGWGGLVVSDETVDVLDMLRAYYEGAAAESCGQCFPCRSGL CCCCCCCCCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCHHHHCCCCHHHHHH KRIAERLDSLCRGKARPDDREYLQELAALVYDSARCDIGQTSPQPLLDVLAHAPHLLEAR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHH TTVRGTYTSLVTAPCINACPGHVKVPDYIEEIRFRRFRKGLDQVMRNCPMPGTIGRVCER HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH PCETACKRGLKGAPVAIRNLKRFLHDHNAKRNPLPEPQCPPENARKVAIIGGGPAGLSCA HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHH YYLAQLGLAPTIFDRHEVCGGMAKFGIPDFRLPPSVLAREVSVAVSGGGEIRNGIEIGRD HHHHHHCCCCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHEEECCCCHHHHHHHHCCC ITLDELHDEGFEAVFIATGAPHAPGMRCEGEENCPLGYLSGIHYLHEATLGRRPVSGTRL CCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE VVVGGGNVAMDCARTALRHGFKEVYVVYRRTEEEMPADPVEVAEAREEGALFTFLAAPIR EEECCCCHHHHHHHHHHHHCHHHHHHHHHHCHHCCCCCHHHHHHHHHCCCEEEEEECCEE IESRDGRVSGLVCQKMELGAADASGRRRPVPVKGAVFEMPCDAIVYAIGQKVALEVVLKG EECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCEEEEEEEEC KDGALNKYNTLDAHEITGEVSALPRIFGGGDCVTGPSSLIAALAAGKRAAAHIAAHLNGT CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCC AQGPSPKEKLEHMLMQMNMLDTKETPLEDPTPLMPIHAIPVQERLQGFTEVETDPLEWEA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHCCHHHCCCCCCHHHH VRESSRCLRCLRLVMAAT HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]